GALK2 (galactokinase 2) - Rat Genome Database

Name: GALK2
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: GALK2 (galactokinase 2) Pan paniscus

Analyze

Symbol:

GALK2

Name:

galactokinase 2

RGD ID:

11872026

Description:

ENCODES a protein that exhibits ATP binding (inferred); galactokinase activity (inferred); kinase activity (inferred); INVOLVED IN carbohydrate phosphorylation (inferred); galactose metabolic process (inferred); ASSOCIATED WITH Bloom syndrome (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (inferred); cytosol (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

N-acetylgalactosamine kinase

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	GALK2 (galactokinase 2)	NCBI	Ortholog
Mus musculus (house mouse):	Galk2 (galactokinase 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Galk2 (galactokinase 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Galk2 (galactokinase 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	GALK2 (galactokinase 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Galk2 (galactokinase 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	GALK2 (galactokinase 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	GALK2 (galactokinase 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Galk2 (galactokinase 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	16	38,395,302 - 38,570,415 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	15	42,579,383 - 42,754,295 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	15	28,103,719 - 28,278,718 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	15	46,426,500 - 46,601,713 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	15	46,440,759 - 46,600,440 (+)	Ensembl	panpan1.1		panPan2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Bloom syndrome (ISO)

colorectal cancer (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

carbohydrate phosphorylation (IEA)

galactose metabolic process (IEA)

Cellular Component

cytoplasm (IEA)

cytosol (IEA)

Molecular Function

ATP binding (IEA)

galactokinase activity (IEA)

kinase activity (IEA)

phosphotransferase activity, alcohol group as acceptor (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

GALK2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	16	38,395,302 - 38,570,415 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	15	42,579,383 - 42,754,295 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	15	28,103,719 - 28,278,718 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	15	46,426,500 - 46,601,713 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	15	46,440,759 - 46,600,440 (+)	Ensembl	panpan1.1		panPan2

GALK2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	15	49,155,774 - 49,367,740 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	15	49,155,656 - 49,367,869 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	15	49,447,971 - 49,624,079 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	15	47,235,268 - 47,409,294 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	15	47,249,713 - 47,409,294	NCBI
Celera	15	26,341,552 - 26,515,592 (+)	NCBI		Celera
Cytogenetic Map	15	q21.1-q21.2	NCBI
HuRef	15	26,280,047 - 26,453,966 (+)	NCBI		HuRef
CHM1_1	15	49,566,269 - 49,740,116 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	15	46,963,986 - 47,175,984 (+)	NCBI		T2T-CHM13v2.0

Galk2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	125,701,029 - 125,826,218 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	125,701,029 - 125,826,219 (+)	Ensembl		GRCm39 Ensembl
GRCm38	2	125,859,109 - 125,984,298 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	125,859,109 - 125,984,299 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	125,684,954 - 125,810,034 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	125,550,659 - 125,675,739 (+)	NCBI		MGSCv36	mm8
Celera	2	127,103,240 - 127,227,668 (+)	NCBI		Celera
Cytogenetic Map	2	F1	NCBI
cM Map	2	61.76	NCBI

Galk2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	133,563,524 - 133,696,423 (+)	NCBI		GRCr8
mRatBN7.2	3	113,110,057 - 113,243,014 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	113,110,030 - 113,233,306 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	116,983,472 - 117,108,681 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	125,578,994 - 125,704,199 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	123,239,365 - 123,364,567 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	118,137,097 - 118,268,838 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	118,136,838 - 118,268,836 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	124,661,798 - 124,793,303 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	113,173,734 - 113,418,061 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	3	111,972,145 - 112,085,987 (+)	NCBI		Celera
Cytogenetic Map	3	q36	NCBI

Galk2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955409	4,751,764 - 4,860,584 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955409	4,751,764 - 4,852,395 (-)	NCBI	ChiLan1.0	ChiLan1.0

GALK2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	30	15,365,659 - 15,494,681 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	30	15,365,690 - 15,494,307 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	30	15,289,459 - 15,419,903 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	30	15,501,612 - 15,638,828 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	30	15,501,581 - 15,752,197 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	30	15,425,107 - 15,562,222 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	30	15,546,581 - 15,677,191 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	30	15,652,501 - 15,781,917 (+)	NCBI		UU_Cfam_GSD_1.0

Galk2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	93,589,122 - 93,724,080 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936471	11,437,384 - 11,572,237 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936471	11,448,689 - 11,572,102 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

GALK2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	122,369,545 - 122,542,222 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	122,370,616 - 122,542,287 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	136,147,563 - 136,319,400 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

GALK2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	26	33,973,843 - 34,136,345 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	26	33,969,657 - 34,122,115 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666048	106,992,233 - 107,155,570 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Galk2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624731	10,533,174 - 10,642,836 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624731	10,533,443 - 10,642,561 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003831495	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008956851	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008956852	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_024925598	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034938733	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055098564	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055098568	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055098569	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055098570	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063596632	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063596633	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JARIFH020000016	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSPPAT00000055373 ⟹ ENSPPAP00000032505

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	15	46,440,759 - 46,600,440 (+)	Ensembl

RefSeq Acc Id:

ENSPPAT00000055389 ⟹ ENSPPAP00000032521

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	15	46,467,107 - 46,600,069 (+)	Ensembl

RefSeq Acc Id:

ENSPPAT00000055391 ⟹ ENSPPAP00000032523

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	15	46,468,461 - 46,600,069 (+)	Ensembl

RefSeq Acc Id:

ENSPPAT00000055393 ⟹ ENSPPAP00000032525

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	15	46,468,461 - 46,600,069 (+)	Ensembl

RefSeq Acc Id:

XM_003831495 ⟹ XP_003831543

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	16	38,407,867 - 38,570,415 (+)	NCBI
NHGRI_mPanPan1	15	42,593,227 - 42,754,295 (+)	NCBI
Mhudiblu_PPA_v0	15	28,117,685 - 28,278,718 (+)	NCBI
PanPan1.1	15	46,440,760 - 46,600,440 (+)	NCBI

Sequence:

show sequence

AGCTTCGCACGTGCTCTGCGCAGGGGCTCCTGCGAGGCCCTAGTCCCTCCCTGGGAGCTAAGAG
CAGGACGGAGGCTGTACCTGACTGCTGCTTGGAGGGAACCCTGGCTGAGTCCAGGGAGGAGGAG
CCAGAGGCGGGGCCGATTGGAAGCAGCCACCTCAGCGAAGCTGCAGGATTTCCGCAGGGCGGGA
GCTGTTTATCTCCCGGAAGAAAACGGCTCCTGTCACAGAAGTCTCGTGATTGCTCTGGGAGCTT
TGCTTAGACACTTGAAACTACAGAAGAAAGAAGGATCTAGCGAAATATGGCTACAGAGAGCCCT
GCTACGCGTCGGGTCCAGGTGGCAGAACATCCCAGGTTACTGAAGCTAAAGGAGATGTTTAACT
CCAAGTTTGGATCTATTCCCAAGTTTTATGTTCGAGCACCAGGAAGAGTCAACATAATAGGAGA
GCATATAGATTATTGTGGATATTCTGTTCTTCCTATGGCTGTAGAACAAGATGTGCTAATAGCT
GTAGAACCTGTGAAAACGTACGCTCTCCAACTGGCCAATACAAATCCCTTGTATCCGGACTTCA
GTACTAGTGCTAATAACATCCAGATTGATAAAACCAAGCCTTTGTGGCACAACTATTTCTTATG
TGGACTTAAAGGAATTCAGGAACACTTTGGTCTTAGTAACCTGACTGGAATGAACTGCCTGGTA
GATGGAAATATCCCACCAAGTTCTGGCCTCTCCAGCTCCAGTGCTTTGGTCTGTTGTGCTGGCT
TGGTGACGCTCACAGTGCTGGGAAGGAATCTATCCAAGGTGGAACTTGCAGAAATCTGTGCCAA
GAGTGAGCGTTACATTGGCACTGAAGGAGGAGGCATGGACCAGTCTATATCATTTCTTGCAGAA
GAAGGAACTGCCAAGTTGATAGAATTTAGTCCTCTGAGGGCAACCGATGTAAAACTCCCAAGTG
GAGCAGTGTTTGTGATTGCCAACAGTTGTGTGGAGATGAATAAGGCAGCAACTTCCCATTTCAA
TATCAGGGTGATGGAGTGTCGGCTGGCTGCGAAGCTCCTGGCTAAATACAAAAGCTTGCAATGG
GACAAAGTACTGAGGCTGGAGGAGGTGCAGGCTAAACTAGGGATTAGTCTAGAAGAAATGCTGT
TGGTCACAGAAGATGCCCTTCATCCTGAACCCTATAACCCTGAGGAGATCTGCAGGTGTCTGGG
AATTAGCCTGGAGGAACTCCGAACCCAAATCCTGAGTCCAAACACTCAAGATGTGCTCATCTTC
AAACTCTATCAGCGGGCAAAGCATGTGTACAGCGAGGCTGCGCGAGTGCTCCAGTTTAAGAAGA
TATGTGAAGAAGCACCTGAAAACATGGTCCAGCTGCTGGGAGAGTTGATGAACCAGAGCCACAT
GAGCTGCCGGGACATGTATGAGTGCAGCTGCCCCGAGCTGGACCAGCTGGTGGACATCTGTCGG
AAGTTTGGGGCTCAAGGGTCACGACTTACTGGAGCAGGATGGGGAGGCTGCACAGTATCAATAG
TACCTGCGGACAAGCTGCCCAGCTTTCTAGCAAATGTGCACAAAGCTTATTACCAGAGGAGTGA
TGGAAGCTTAGCACCGGAGAAGCAAAGTTTGTTTGCTACCAAACCTGGAGGTGGGGCTTTGGTT
TTCCTTGAGGCCTGAAAAAATGTAAAAAATCTGAGAGAAACTACTTAGGGCACTTAGGAATTGG
CAGGACTTTCTGTGCCACAGTAAATTAATCTTCCTTCTGTTTTGTATTATGATGAACGGTTGCT
ATTATATCAAGATATATTTTCAAAGAAATCGTTGAAAGCTCTCTATGCTTCATAATGATTATTT
TTCCATCTTAAAATATGGTTTTACTATTAAGAGCCAAGATCATGCTTGGACAGATCTTTTAAGA
ATAATTTACTGAGACTTATTGATTTGAAGATTTTAAAGATGAATGGTAAAACACACTCTTAATA
CTGATTACATGGATTGGACTTGAATTAAATATATTGTTACAATTAAATTGATACCACTGAATTG
TA

hide sequence

RefSeq Acc Id:

XM_008956851 ⟹ XP_008955099

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	16	38,395,302 - 38,570,415 (+)	NCBI
NHGRI_mPanPan1	15	42,579,385 - 42,754,295 (+)	NCBI
Mhudiblu_PPA_v0	15	28,103,719 - 28,278,718 (+)	NCBI
PanPan1.1	15	46,426,500 - 46,600,440 (+)	NCBI

Sequence:

show sequence

CCCCCCGTTTCCTCCGAAGCGGTTGGTGCTTTAGCAACTAAAGCTGGCAACTGGGACATCGTCA
GGTGCTGCAGGTCTCAGCCGAAGGGCGTCGGAAACTGCGCTCGCACCGAGCAGTTTCCAGCCTC
CTGGGTAAGGGAGCAGTCTCCTCCCTTGCTTGGGACTCTGGACGCATCTCATTCCGGTGAAAGT
AAGGGACAGCTTAGGAGCAGAAGCCTTTCGCGGAGAAAAGGCTGACATGCCCGTCCTATATGAC
AGGTTACTGAAGCTAAAGGAGATGTTTAACTCCAAGTTTGGATCTATTCCCAAGTTTTATGTTC
GAGCACCAGGAAGAGTCAACATAATAGGAGAGCATATAGATTATTGTGGATATTCTGTTCTTCC
TATGGCTGTAGAACAAGATGTGCTAATAGCTGTAGAACCTGTGAAAACGTACGCTCTCCAACTG
GCCAATACAAATCCCTTGTATCCGGACTTCAGTACTAGTGCTAATAACATCCAGATTGATAAAA
CCAAGCCTTTGTGGCACAACTATTTCTTATGTGGACTTAAAGGAATTCAGGAACACTTTGGTCT
TAGTAACCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAGTTCTGGCCTCTCC
AGCTCCAGTGCTTTGGTCTGTTGTGCTGGCTTGGTGACGCTCACAGTGCTGGGAAGGAATCTAT
CCAAGGTGGAACTTGCAGAAATCTGTGCCAAGAGTGAGCGTTACATTGGCACTGAAGGAGGAGG
CATGGACCAGTCTATATCATTTCTTGCAGAAGAAGGAACTGCCAAGTTGATAGAATTTAGTCCT
CTGAGGGCAACCGATGTAAAACTCCCAAGTGGAGCAGTGTTTGTGATTGCCAACAGTTGTGTGG
AGATGAATAAGGCAGCAACTTCCCATTTCAATATCAGGGTGATGGAGTGTCGGCTGGCTGCGAA
GCTCCTGGCTAAATACAAAAGCTTGCAATGGGACAAAGTACTGAGGCTGGAGGAGGTGCAGGCT
AAACTAGGGATTAGTCTAGAAGAAATGCTGTTGGTCACAGAAGATGCCCTTCATCCTGAACCCT
ATAACCCTGAGGAGATCTGCAGGTGTCTGGGAATTAGCCTGGAGGAACTCCGAACCCAAATCCT
GAGTCCAAACACTCAAGATGTGCTCATCTTCAAACTCTATCAGCGGGCAAAGCATGTGTACAGC
GAGGCTGCGCGAGTGCTCCAGTTTAAGAAGATATGTGAAGAAGCACCTGAAAACATGGTCCAGC
TGCTGGGAGAGTTGATGAACCAGAGCCACATGAGCTGCCGGGACATGTATGAGTGCAGCTGCCC
CGAGCTGGACCAGCTGGTGGACATCTGTCGGAAGTTTGGGGCTCAAGGGTCACGACTTACTGGA
GCAGGATGGGGAGGCTGCACAGTATCAATAGTACCTGCGGACAAGCTGCCCAGCTTTCTAGCAA
ATGTGCACAAAGCTTATTACCAGAGGAGTGATGGAAGCTTAGCACCGGAGAAGCAAAGTTTGTT
TGCTACCAAACCTGGAGGTGGGGCTTTGGTTTTCCTTGAGGCCTGAAAAAATGTAAAAAATCTG
AGAGAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATTAATCTTC
CTTCTGTTTTGTATTATGATGAACGGTTGCTATTATATCAAGATATATTTTCAAAGAAATCGTT
GAAAGCTCTCTATGCTTCATAATGATTATTTTTCCATCTTAAAATATGGTTTTACTATTAAGAG
CCAAGATCATGCTTGGACAGATCTTTTAAGAATAATTTACTGAGACTTATTGATTTGAAGATTT
TAAAGATGAATGGTAAAACACACTCTTAATACTGATTACATGGATTGGACTTGAATTAAATATA
TTGTTACAATTAAATTGATACCACTGAATTGTA

hide sequence

RefSeq Acc Id:

XM_008956852 ⟹ XP_008955100

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	16	38,407,867 - 38,570,415 (+)	NCBI
NHGRI_mPanPan1	15	42,593,555 - 42,754,295 (+)	NCBI
Mhudiblu_PPA_v0	15	28,117,689 - 28,278,718 (+)	NCBI
PanPan1.1	15	46,440,760 - 46,600,435 (+)	NCBI

Sequence:

show sequence

AGCTTCGCACGTGCTCTGCGCAGGGGCTCCTGCGAGGCCCTAGTCCCTCCCTGGGAGCTAAGAG
CAGGACGGAGGCTGTACCTGACTGCTGCTTGGAGGGAACCCTGGCTGAGTCCAGGGAGGAGGAG
CCAGAGGCGGGGCCGATTGGAAGCAGCCACCTCAGCGAAGCTGCAGGATTTCCGCAGGGCGGGA
GCTGTTTATCTCCCGGAAGAAAACGGCTCCTGTCACAGAAGTCTCGTGATTGCTCTGGGAGCTT
TGCTTAGACACTTGAAACTACAGAAGAAAGAAGGATCTAGCGAAATATGGCTACAGAGAGCCCT
GCTACGCGTCGGGTCCAGGTGGCAGAACATCCCAGGTTACTGAAGCTAAAGGAGATGTTTAACT
CCAAGTTTGGATCTATTCCCAAGTTTTATGTTCGAGCACCAGGAAGAGTCAACATAATAGGAGA
GCATATAGATTATTGTGGATATTCTGTTCTTCCTATGGCTGTAGAACAAGATGTGCTAATAGCT
GTAGAACCTGTGAAAACGTACGCTCTCCAACTGGCCAATACAAATCCCTTGTATCCGGACTTCA
GTACTAGTGCTAATAACATCCAGATTGATAAAACCAAGCCTTTGTGGCACAACTATTTCTTATG
TGGACTTAAAGGAATTCAGGAACACTTTGGTCTTAGTAACCTGACTGGAATGAACTGCCTGGTA
GATGGAAATATCCCACCAAGTTCTGGCCTCTCCAGCTCCAGTGCTTTGGTCTGTTGTGCTGGCT
TGGTGACGCTCACAGTGCTGGGAAGGAATCTATCCAAGGCCAAGTTGATAGAATTTAGTCCTCT
GAGGGCAACCGATGTAAAACTCCCAAGTGGAGCAGTGTTTGTGATTGCCAACAGTTGTGTGGAG
ATGAATAAGGCAGCAACTTCCCATTTCAATATCAGGGTGATGGAGTGTCGGCTGGCTGCGAAGC
TCCTGGCTAAATACAAAAGCTTGCAATGGGACAAAGTACTGAGGCTGGAGGAGGTGCAGGCTAA
ACTAGGGATTAGTCTAGAAGAAATGCTGTTGGTCACAGAAGATGCCCTTCATCCTGAACCCTAT
AACCCTGAGGAGATCTGCAGGTGTCTGGGAATTAGCCTGGAGGAACTCCGAACCCAAATCCTGA
GTCCAAACACTCAAGATGTGCTCATCTTCAAACTCTATCAGCGGGCAAAGCATGTGTACAGCGA
GGCTGCGCGAGTGCTCCAGTTTAAGAAGATATGTGAAGAAGCACCTGAAAACATGGTCCAGCTG
CTGGGAGAGTTGATGAACCAGAGCCACATGAGCTGCCGGGACATGTATGAGTGCAGCTGCCCCG
AGCTGGACCAGCTGGTGGACATCTGTCGGAAGTTTGGGGCTCAAGGGTCACGACTTACTGGAGC
AGGATGGGGAGGCTGCACAGTATCAATAGTACCTGCGGACAAGCTGCCCAGCTTTCTAGCAAAT
GTGCACAAAGCTTATTACCAGAGGAGTGATGGAAGCTTAGCACCGGAGAAGCAAAGTTTGTTTG
CTACCAAACCTGGAGGTGGGGCTTTGGTTTTCCTTGAGGCCTGAAAAAATGTAAAAAATCTGAG
AGAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATTAATCTTCCT
TCTGTTTTGTATTATGATGAACGGTTGCTATTATATCAAGATATATTTTCAAAGAAATCGTTGA
AAGCTCTCTATGCTTCATAATGATTATTTTTCCATCTTAAAATATGGTTTTACTATTAAGAGCC
AAGATCATGCTTGGACAGATCTTTTAAGAATAATTTACTGAGACTTATTGATTTGAAGATTTTA
AAGATGAATGGTAAAACACACTCTTAATACTGATTACATGGATTGGACTTGAATTAAATATATT
GTTACAATTAAATTGATACCACTGAA

hide sequence

RefSeq Acc Id:

XM_024925598 ⟹ XP_024781366

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	16	38,433,958 - 38,570,415 (+)	NCBI
NHGRI_mPanPan1	15	42,617,840 - 42,754,295 (+)	NCBI
Mhudiblu_PPA_v0	15	28,142,027 - 28,278,718 (+)	NCBI
PanPan1.1	15	46,464,962 - 46,600,440 (+)	NCBI

Sequence:

show sequence

ATGGAGTCTTGCTCTGTCACCTGTGCTGGAGGCTAGAGTGCAAGTGGCACGATCTTGGCTCACT
GCAACCTCCGCCTCCTGGGTTGAAGTGATTCTCCTGCCTCAGCCTCCGGAGTAGCTGGGATTAC
AGGTTACTGAAGCTAAAGGAGATGTTTAACTCCAAGTTTGGATCTATTCCCAAGTTTTATGTTC
GAGCACCAGGAAGAGTCAACATAATAGGAGAGCATATAGATTATTGTGGATATTCTGTTCTTCC
TATGGCTGTAGAACAAGATGTGCTAATAGCTGTAGAACCTGTGAAAACGTACGCTCTCCAACTG
GCCAATACAAATCCCTTGTATCCGGACTTCAGTACTAGTGCTAATAACATCCAGATTGATAAAA
CCAAGCCTTTGTGGCACAACTATTTCTTATGTGGACTTAAAGGAATTCAGGAACACTTTGGTCT
TAGTAACCTGACTGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAGTTCTGGCCTCTCC
AGCTCCAGTGCTTTGGTCTGTTGTGCTGGCTTGGTGACGCTCACAGTGCTGGGAAGGAATCTAT
CCAAGGTGGAACTTGCAGAAATCTGTGCCAAGAGTGAGCGTTACATTGGCACTGAAGGAGGAGG
CATGGACCAGTCTATATCATTTCTTGCAGAAGAAGGAACTGCCAAGTTGATAGAATTTAGTCCT
CTGAGGGCAACCGATGTAAAACTCCCAAGTGGAGCAGTGTTTGTGATTGCCAACAGTTGTGTGG
AGATGAATAAGGCAGCAACTTCCCATTTCAATATCAGGGTGATGGAGTGTCGGCTGGCTGCGAA
GCTCCTGGCTAAATACAAAAGCTTGCAATGGGACAAAGTACTGAGGCTGGAGGAGGTGCAGGCT
AAACTAGGGATTAGTCTAGAAGAAATGCTGTTGGTCACAGAAGATGCCCTTCATCCTGAACCCT
ATAACCCTGAGGAGATCTGCAGGTGTCTGGGAATTAGCCTGGAGGAACTCCGAACCCAAATCCT
GAGTCCAAACACTCAAGATGTGCTCATCTTCAAACTCTATCAGCGGGCAAAGCATGTGTACAGC
GAGGCTGCGCGAGTGCTCCAGTTTAAGAAGATATGTGAAGAAGCACCTGAAAACATGGTCCAGC
TGCTGGGAGAGTTGATGAACCAGAGCCACATGAGCTGCCGGGACATGTATGAGTGCAGCTGCCC
CGAGCTGGACCAGCTGGTGGACATCTGTCGGAAGTTTGGGGCTCAAGGGTCACGACTTACTGGA
GCAGGATGGGGAGGCTGCACAGTATCAATAGTACCTGCGGACAAGCTGCCCAGCTTTCTAGCAA
ATGTGCACAAAGCTTATTACCAGAGGAGTGATGGAAGCTTAGCACCGGAGAAGCAAAGTTTGTT
TGCTACCAAACCTGGAGGTGGGGCTTTGGTTTTCCTTGAGGCCTGAAAAAATGTAAAAAATCTG
AGAGAAACTACTTAGGGCACTTAGGAATTGGCAGGACTTTCTGTGCCACAGTAAATTAATCTTC
CTTCTGTTTTGTATTATGATGAACGGTTGCTATTATATCAAGATATATTTTCAAAGAAATCGTT
GAAAGCTCTCTATGCTTCATAATGATTATTTTTCCATCTTAAAATATGGTTTTACTATTAAGAG
CCAAGATCATGCTTGGACAGATCTTTTAAGAATAATTTACTGAGACTTATTGATTTGAAGATTT
TAAAGATGAATGGTAAAACACACTCTTAATACTGATTACATGGATTGGACTTGAATTAAATATA
TTGTTACAATTAAATTGATACCACTGAATTGTA

hide sequence

RefSeq Acc Id:

XM_055098564 ⟹ XP_054954539

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	16	38,401,384 - 38,570,415 (+)	NCBI
NHGRI_mPanPan1	15	42,579,385 - 42,754,295 (+)	NCBI

RefSeq Acc Id:

XM_055098568 ⟹ XP_054954543

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	16	38,398,589 - 38,570,415 (+)	NCBI
NHGRI_mPanPan1	15	42,582,456 - 42,754,295 (+)	NCBI

RefSeq Acc Id:

XM_055098569 ⟹ XP_054954544

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	16	38,395,518 - 38,570,415 (+)	NCBI
NHGRI_mPanPan1	15	42,579,385 - 42,754,295 (+)	NCBI

RefSeq Acc Id:

XM_055098570 ⟹ XP_054954545

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	16	38,401,384 - 38,570,415 (+)	NCBI
NHGRI_mPanPan1	15	42,579,385 - 42,754,295 (+)	NCBI

RefSeq Acc Id:

XM_063596632 ⟹ XP_063452702

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	16	38,401,384 - 38,570,415 (+)	NCBI

RefSeq Acc Id:

XM_063596633 ⟹ XP_063452703

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	16	38,407,867 - 38,570,415 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_003831543	(Get FASTA)	NCBI Sequence Viewer
	XP_008955099	(Get FASTA)	NCBI Sequence Viewer
	XP_008955100	(Get FASTA)	NCBI Sequence Viewer
	XP_024781366	(Get FASTA)	NCBI Sequence Viewer
	XP_054954539	(Get FASTA)	NCBI Sequence Viewer
	XP_054954543	(Get FASTA)	NCBI Sequence Viewer
	XP_054954544	(Get FASTA)	NCBI Sequence Viewer
	XP_054954545	(Get FASTA)	NCBI Sequence Viewer
	XP_063452702	(Get FASTA)	NCBI Sequence Viewer
	XP_063452703	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSPPAP00000032505.1
	ENSPPAP00000032521.1
	ENSPPAP00000032523.1
	ENSPPAP00000032525.1

RefSeq Acc Id:

XP_008955099 ⟸ XM_008956851

- Peptide Label:

isoform X4

- Sequence:

show sequence

MPVLYDRLLKLKEMFNSKFGSIPKFYVRAPGRVNIIGEHIDYCGYSVLPMAVEQDVLIAVEPVK
TYALQLANTNPLYPDFSTSANNIQIDKTKPLWHNYFLCGLKGIQEHFGLSNLTGMNCLVDGNIP
PSSGLSSSSALVCCAGLVTLTVLGRNLSKVELAEICAKSERYIGTEGGGMDQSISFLAEEGTAK
LIEFSPLRATDVKLPSGAVFVIANSCVEMNKAATSHFNIRVMECRLAAKLLAKYKSLQWDKVLR
LEEVQAKLGISLEEMLLVTEDALHPEPYNPEEICRCLGISLEELRTQILSPNTQDVLIFKLYQR
AKHVYSEAARVLQFKKICEEAPENMVQLLGELMNQSHMSCRDMYECSCPELDQLVDICRKFGAQ
GSRLTGAGWGGCTVSIVPADKLPSFLANVHKAYYQRSDGSLAPEKQSLFATKPGGGALVFLEA

hide sequence

RefSeq Acc Id:

XP_008955100 ⟸ XM_008956852

- Peptide Label:

isoform X6

- Sequence:

show sequence

MATESPATRRVQVAEHPRLLKLKEMFNSKFGSIPKFYVRAPGRVNIIGEHIDYCGYSVLPMAVE
QDVLIAVEPVKTYALQLANTNPLYPDFSTSANNIQIDKTKPLWHNYFLCGLKGIQEHFGLSNLT
GMNCLVDGNIPPSSGLSSSSALVCCAGLVTLTVLGRNLSKAKLIEFSPLRATDVKLPSGAVFVI
ANSCVEMNKAATSHFNIRVMECRLAAKLLAKYKSLQWDKVLRLEEVQAKLGISLEEMLLVTEDA
LHPEPYNPEEICRCLGISLEELRTQILSPNTQDVLIFKLYQRAKHVYSEAARVLQFKKICEEAP
ENMVQLLGELMNQSHMSCRDMYECSCPELDQLVDICRKFGAQGSRLTGAGWGGCTVSIVPADKL
PSFLANVHKAYYQRSDGSLAPEKQSLFATKPGGGALVFLEA

hide sequence

RefSeq Acc Id:

XP_003831543 ⟸ XM_003831495

- Peptide Label:

isoform X2

- Sequence:

show sequence

MATESPATRRVQVAEHPRLLKLKEMFNSKFGSIPKFYVRAPGRVNIIGEHIDYCGYSVLPMAVE
QDVLIAVEPVKTYALQLANTNPLYPDFSTSANNIQIDKTKPLWHNYFLCGLKGIQEHFGLSNLT
GMNCLVDGNIPPSSGLSSSSALVCCAGLVTLTVLGRNLSKVELAEICAKSERYIGTEGGGMDQS
ISFLAEEGTAKLIEFSPLRATDVKLPSGAVFVIANSCVEMNKAATSHFNIRVMECRLAAKLLAK
YKSLQWDKVLRLEEVQAKLGISLEEMLLVTEDALHPEPYNPEEICRCLGISLEELRTQILSPNT
QDVLIFKLYQRAKHVYSEAARVLQFKKICEEAPENMVQLLGELMNQSHMSCRDMYECSCPELDQ
LVDICRKFGAQGSRLTGAGWGGCTVSIVPADKLPSFLANVHKAYYQRSDGSLAPEKQSLFATKP
GGGALVFLEA

hide sequence

RefSeq Acc Id:

XP_024781366 ⟸ XM_024925598

- Peptide Label:

isoform X5

- Sequence:

show sequence

MFNSKFGSIPKFYVRAPGRVNIIGEHIDYCGYSVLPMAVEQDVLIAVEPVKTYALQLANTNPLY
PDFSTSANNIQIDKTKPLWHNYFLCGLKGIQEHFGLSNLTGMNCLVDGNIPPSSGLSSSSALVC
CAGLVTLTVLGRNLSKVELAEICAKSERYIGTEGGGMDQSISFLAEEGTAKLIEFSPLRATDVK
LPSGAVFVIANSCVEMNKAATSHFNIRVMECRLAAKLLAKYKSLQWDKVLRLEEVQAKLGISLE
EMLLVTEDALHPEPYNPEEICRCLGISLEELRTQILSPNTQDVLIFKLYQRAKHVYSEAARVLQ
FKKICEEAPENMVQLLGELMNQSHMSCRDMYECSCPELDQLVDICRKFGAQGSRLTGAGWGGCT
VSIVPADKLPSFLANVHKAYYQRSDGSLAPEKQSLFATKPGGGALVFLEA

hide sequence

RefSeq Acc Id:

ENSPPAP00000032505 ⟸ ENSPPAT00000055373

RefSeq Acc Id:

ENSPPAP00000032521 ⟸ ENSPPAT00000055389

RefSeq Acc Id:

ENSPPAP00000032525 ⟸ ENSPPAT00000055393

RefSeq Acc Id:

ENSPPAP00000032523 ⟸ ENSPPAT00000055391

RefSeq Acc Id:	XP_054954539 ⟸ XM_055098564
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_054954545 ⟸ XM_055098570
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_054954544 ⟸ XM_055098569
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_054954543 ⟸ XM_055098568
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_063452702 ⟸ XM_063596632
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_063452703 ⟸ XM_063596633
- Peptide Label:	isoform X9

Protein Domains

Galactokinase N-terminal GHMP kinase C-terminal GHMP kinase N-terminal

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000039106	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000055373.1	UniProtKB/TrEMBL
	ENSPPAT00000055389.1	UniProtKB/TrEMBL
	ENSPPAT00000055391.1	UniProtKB/TrEMBL
	ENSPPAT00000055393.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.1440.340	UniProtKB/TrEMBL
	3.30.230.10	UniProtKB/TrEMBL
	3.30.70.3170	UniProtKB/TrEMBL
	3.30.70.890	UniProtKB/TrEMBL
InterPro	Galactokinase	UniProtKB/TrEMBL
	Galactokinase_CS	UniProtKB/TrEMBL
	GalKase_N	UniProtKB/TrEMBL
	GHMP_kinase_C_dom	UniProtKB/TrEMBL
	GHMP_kinase_C_sf	UniProtKB/TrEMBL
	GHMP_kinase_N_dom	UniProtKB/TrEMBL
	GHMP_knse_ATP-bd_CS	UniProtKB/TrEMBL
	Mevalonate/galactokinase	UniProtKB/TrEMBL
	Ribosomal_S5_D2-typ_fold	UniProtKB/TrEMBL
	Ribosomal_S5_D2-typ_fold_subgr	UniProtKB/TrEMBL
KEGG Report	pps:100993695	UniProtKB/TrEMBL
NCBI Gene	GALK2	ENTREZGENE
PANTHER	GALACTOKINASE-RELATED	UniProtKB/TrEMBL
	MEVALONATE KINASE/GALACTOKINASE	UniProtKB/TrEMBL
Pfam	GalKase_gal_bdg	UniProtKB/TrEMBL
	GHMP_kinases_C	UniProtKB/TrEMBL
	GHMP_kinases_N	UniProtKB/TrEMBL
PIRSF	Galactokinase	UniProtKB/TrEMBL
PRINTS	GALCTOKINASE	UniProtKB/TrEMBL
	MEVGALKINASE	UniProtKB/TrEMBL
PROSITE	GALACTOKINASE	UniProtKB/TrEMBL
	GHMP_KINASES_ATP	UniProtKB/TrEMBL
Superfamily-SCOP	SSF54211	UniProtKB/TrEMBL
	SSF55060	UniProtKB/TrEMBL
UniProt	A0A2R9BS71_PANPA	UniProtKB/TrEMBL
	A0A2R9BSU5_PANPA	UniProtKB/TrEMBL
	A0A2R9BVL1_PANPA	UniProtKB/TrEMBL
	A0A2R9BVN1_PANPA	UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar