EPSTI1 (epithelial stromal interaction 1) - Rat Genome Database

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Gene: EPSTI1 (epithelial stromal interaction 1) Pan paniscus
Analyze
Symbol: EPSTI1
Name: epithelial stromal interaction 1
RGD ID: 11849720
Description: ASSOCIATED WITH COVID-19 (ortholog); prostate cancer (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: epithelial stromal interaction 1 (breast); epithelial-stromal interaction protein 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21442,373,947 - 42,477,696 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11333,477,595 - 33,581,105 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01324,058,760 - 24,162,261 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References

Genomics

Comparative Map Data
EPSTI1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21442,373,947 - 42,477,696 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11333,477,595 - 33,581,105 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01324,058,760 - 24,162,261 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
EPSTI1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381342,886,388 - 42,992,241 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1342,886,388 - 42,992,271 (-)EnsemblGRCh38hg38GRCh38
GRCh371343,460,524 - 43,566,377 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361342,360,122 - 42,464,377 (-)NCBINCBI36Build 36hg18NCBI36
Build 341342,360,121 - 42,464,377NCBI
Celera1324,519,978 - 24,622,563 (-)NCBICelera
Cytogenetic Map13q14.11NCBI
HuRef1324,264,416 - 24,368,626 (-)NCBIHuRef
CHM1_11343,428,059 - 43,533,952 (-)NCBICHM1_1
T2T-CHM13v2.01342,106,432 - 42,210,657 (-)NCBIT2T-CHM13v2.0
Epsti1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391478,141,679 - 78,240,096 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1478,141,679 - 78,240,097 (+)EnsemblGRCm39 Ensembl
GRCm381477,904,239 - 78,002,656 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1477,904,239 - 78,002,657 (+)EnsemblGRCm38mm10GRCm38
MGSCv371478,304,046 - 78,402,463 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361476,638,546 - 76,736,808 (+)NCBIMGSCv36mm8
Celera1475,422,555 - 75,520,932 (+)NCBICelera
Cytogenetic Map14D3NCBI
cM Map1441.08NCBI
Epsti1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81559,692,712 - 59,791,376 (+)NCBIGRCr8
mRatBN7.21553,283,964 - 53,382,192 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1553,284,216 - 53,382,191 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1557,417,604 - 57,515,564 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01558,535,948 - 58,633,920 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01555,360,511 - 55,458,802 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01560,084,966 - 60,190,360 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1560,084,918 - 60,190,363 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01563,762,909 - 63,865,564 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41558,989,876 - 59,088,931 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1552,880,729 - 52,978,481 (+)NCBICelera
Cytogenetic Map15q11NCBI
Epsti1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955518788,961 - 919,784 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955518790,815 - 919,869 (-)NCBIChiLan1.0ChiLan1.0
EPSTI1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1227,862,068 - 7,956,077 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl227,862,175 - 8,108,299 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha227,854,631 - 7,948,531 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0228,067,355 - 8,161,200 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl228,067,370 - 8,319,214 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1227,772,478 - 7,866,431 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0227,829,444 - 7,923,799 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0227,839,883 - 7,933,794 (+)NCBIUU_Cfam_GSD_1.0
Epsti1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404945153,084,595 - 153,173,543 (-)NCBIHiC_Itri_2
SpeTri2.0NW_004936747900,889 - 989,590 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
EPSTI1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1124,116,986 - 24,216,215 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11124,116,991 - 24,216,219 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21124,760,267 - 24,865,232 (+)NCBISscrofa10.2Sscrofa10.2susScr3
EPSTI1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1320,955,649 - 21,128,997 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl321,022,117 - 21,128,503 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605723,064,565 - 23,239,629 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Epsti1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474812,162,314 - 12,269,031 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474812,162,530 - 12,266,381 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_003805932   ⟹   XP_003805980
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21442,373,947 - 42,477,696 (-)NCBI
NHGRI_mPanPan11333,477,595 - 33,581,105 (-)NCBI
Mhudiblu_PPA_v01324,058,760 - 24,162,260 (-)NCBI
Sequence:
RefSeq Acc Id: XM_024927452   ⟹   XP_024783220
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21442,373,947 - 42,477,290 (-)NCBI
NHGRI_mPanPan11333,477,595 - 33,580,930 (-)NCBI
Mhudiblu_PPA_v01324,058,760 - 24,162,258 (-)NCBI
Sequence:
RefSeq Acc Id: XM_063595930   ⟹   XP_063452000
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21442,373,947 - 42,477,467 (-)NCBI
Protein Sequences
Protein RefSeqs XP_003805980 (Get FASTA)   NCBI Sequence Viewer  
  XP_024783220 (Get FASTA)   NCBI Sequence Viewer  
  XP_063452000 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000004999
  ENSPPAP00000004999.1
Reference Protein Sequences
RefSeq Acc Id: XP_003805980   ⟸   XM_003805932
- Peptide Label: isoform X1
- UniProtKB: A0A2R8ZJX5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_024783220   ⟸   XM_024927452
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_063452000   ⟸   XM_063595930
- Peptide Label: isoform X3


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000020892 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000022897.1 UniProtKB/TrEMBL
InterPro EPSTI1 UniProtKB/TrEMBL
KEGG Report pps:100992226 UniProtKB/TrEMBL
NCBI Gene EPSTI1 ENTREZGENE
PANTHER EPITHELIAL-STROMAL INTERACTION PROTEIN 1 UniProtKB/TrEMBL
  PTHR22529 UniProtKB/TrEMBL
UniProt A0A2R8ZJX5 ENTREZGENE, UniProtKB/TrEMBL