OS9 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 10 | 36,619,441 - 36,646,957 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 12 | 36,616,212 - 36,643,728 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 12 | 31,205,239 - 31,232,769 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 12 | 31,465,836 - 31,493,076 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 12 | 31,463,716 - 31,493,076 (-) | Ensembl | panpan1.1 | | panPan2 | |
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OS9 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 12 | 57,694,132 - 57,721,557 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 12 | 57,693,841 - 57,728,342 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 12 | 58,087,915 - 58,115,340 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 12 | 56,374,153 - 56,401,607 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 12 | 57,745,335 - 57,772,930 (+) | NCBI | | Celera | | | Cytogenetic Map | 12 | q13.3-q14.1 | NCBI | | | | | HuRef | 12 | 55,124,606 - 55,152,176 (+) | NCBI | | HuRef | | | CHM1_1 | 12 | 58,055,537 - 58,083,142 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 12 | 57,662,503 - 57,689,908 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Os9 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 10 | 126,928,880 - 126,957,029 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 10 | 126,931,519 - 126,957,000 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 10 | 127,094,259 - 127,121,160 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 10 | 127,095,650 - 127,121,131 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 10 | 126,531,315 - 126,558,216 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 10 | 126,498,599 - 126,524,074 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 10 | 129,486,911 - 129,514,007 (-) | NCBI | | Celera | | | Cytogenetic Map | 10 | D3 | NCBI | | | | | cM Map | 10 | 74.5 | NCBI | | | | |
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Os9 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 7 | 64,802,517 - 64,829,185 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 7 | 62,915,498 - 62,957,591 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 7 | 62,915,515 - 62,943,745 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 7 | 64,806,506 - 64,833,054 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 7 | 67,008,904 - 67,035,457 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 7 | 66,809,970 - 66,836,472 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 7 | 70,378,625 - 70,407,135 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 7 | 70,380,311 - 70,407,177 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 7 | 70,556,327 - 70,584,837 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 7 | 67,046,802 - 67,073,355 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 7 | 67,067,533 - 67,094,085 (-) | NCBI | | | | | Celera | 7 | 60,060,542 - 60,087,034 (-) | NCBI | | Celera | | | Cytogenetic Map | 7 | q22 | NCBI | | | | |
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Os9 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955458 | 5,407,739 - 5,432,085 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955458 | 5,407,709 - 5,432,646 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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OS9 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 10 | 1,757,070 - 1,787,822 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 10 | 1,757,103 - 1,787,203 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 10 | 1,820,251 - 1,851,006 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 10 | 1,766,439 - 1,797,192 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 10 | 1,766,407 - 1,797,188 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 10 | 1,744,195 - 1,774,942 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 10 | 1,986,092 - 2,017,042 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 10 | 2,111,143 - 2,141,905 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Os9 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024404945 | 57,010,035 - 57,037,803 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936646 | 1,832,015 - 1,859,576 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936646 | 1,832,434 - 1,860,200 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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OS9 (Sus scrofa - pig) |
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OS9 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 11 | 53,606,916 - 53,635,152 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 11 | 53,607,008 - 53,635,793 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666037 | 192,327,156 - 192,355,401 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Os9 (Heterocephalus glaber - naked mole-rat) |
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