Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.
Term:abnormal nasal cavity morphology
go back to main search page
Accession:MP:0002237 term browser browse the term
Definition:any structural anomaly of the cavity of the respiratory tract that extends from the nares to the pharynx; the nasal cavity is lined with ciliated mucosa
Synonyms:exact_synonym: abnormal cavity of nose morphology;   abnormal cavity of olfactory apparatus morphology;   abnormal nasal canal morphology;   abnormal nasal conduit space morphology;   abnormal nasal fossa morphology;   abnormal olfactory cavity morphology;   abnormal olfactory chamber cavity morphology;   abnormal olfactory chamber morphology


show annotations for term's descendants           Sort by:
abnormal nasal cavity morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a3 aldehyde dehydrogenase family 1, subfamily A3 IAGP MGI PMID:14623956 NCBI chr 7:66,040,640...66,077,225
Ensembl chr 7:66,040,638...66,077,265 		JBrowse link
G Alx3 aristaless-like homeobox 3 IAGP MGI PMID:11641221 NCBI chr 3:107,502,347...107,513,191
Ensembl chr 3:107,502,347...107,513,092 		JBrowse link
G Alx4 aristaless-like homeobox 4 IAGP MGI PMID:11641221 NCBI chr 2:93,472,779...93,511,686
Ensembl chr 2:93,472,729...93,511,684 		JBrowse link
G Atp11a ATPase, class VI, type 11A IEA MGI NCBI chr 8:12,807,016...12,918,728
Ensembl chr 8:12,807,014...12,918,728 		JBrowse link
G Cert1 ceramide transporter 1 IEA MGI NCBI chr13:96,679,243...96,782,362
Ensembl chr13:96,679,243...96,776,675 		JBrowse link
G Cfap206 cilia and flagella associated protein 206 IAGP MGI PMID:32376681 NCBI chr 4:34,688,574...34,730,263
Ensembl chr 4:34,688,559...34,730,206 		JBrowse link
G Csgalnact1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 IAGP MGI PMID:30459452 NCBI chr 8:68,809,433...69,188,270
Ensembl chr 8:68,809,433...69,187,798 		JBrowse link
G Dhcr7 7-dehydrocholesterol reductase IAGP MGI PMID:11230174 NCBI chr 7:143,376,827...143,402,147
Ensembl chr 7:143,376,882...143,402,147 		JBrowse link
G E2f4 E2F transcription factor 4 IAGP MGI PMID:10983976 NCBI chr 8:106,024,295...106,032,002
Ensembl chr 8:106,024,295...106,032,002 		JBrowse link
G Eda ectodysplasin-A IAGP MGI PMID:13103353 NCBI chr  X:99,019,212...99,444,366
Ensembl chr  X:99,019,212...99,444,368 		JBrowse link
G Ehbp1l1 EH domain binding protein 1-like 1 IEA MGI NCBI chr19:5,757,397...5,776,504
Ensembl chr19:5,757,404...5,776,345 		JBrowse link
G Foxj1 forkhead box J1 IAGP MGI PMID:30665704 NCBI chr11:116,221,530...116,226,331
Ensembl chr11:116,221,530...116,226,225 		JBrowse link
G Gas2l2 growth arrest-specific 2 like 2 IAGP MGI PMID:30665704 NCBI chr11:83,312,461...83,320,347
Ensembl chr11:83,312,728...83,320,281 		JBrowse link
G Gli3 GLI-Kruppel family member GLI3 IAGP MGI PMID:6049666 NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611 		JBrowse link
G Gsc goosecoid homeobox IAGP MGI PMID:7555718 PMID:7555726 NCBI chr12:104,437,468...104,439,495
Ensembl chr12:104,437,468...104,439,589 		JBrowse link
G Hesx1 homeobox gene expressed in ES cells IAGP MGI PMID:9620767 NCBI chr14:26,716,322...26,724,286
Ensembl chr14:26,716,373...26,724,286 		JBrowse link
G Hhat hedgehog acyltransferase IAGP MGI PMID:23055936 NCBI chr 1:192,195,133...192,453,546
Ensembl chr 1:192,179,019...192,453,531 		JBrowse link
G Morc2a microrchidia 2A IEA MGI NCBI chr11:3,599,132...3,640,477
Ensembl chr11:3,599,191...3,640,477 		JBrowse link
G Otx2 orthodenticle homeobox 2 IAGP MGI PMID:7590242 NCBI chr14:48,894,238...48,905,101
Ensembl chr14:48,895,134...48,911,276 		JBrowse link
G Pax6 paired box 6 IAGP MGI PMID:1684639 NCBI chr 2:105,499,241...105,528,755
Ensembl chr 2:105,499,245...105,527,709 		JBrowse link
G Psph phosphoserine phosphatase IEA MGI NCBI chr 5:129,842,622...129,864,318
Ensembl chr 5:129,842,622...129,864,513 		JBrowse link
G Rpgrip1l Rpgrip1-like IEA MGI NCBI chr 8:91,943,658...92,039,919
Ensembl chr 8:91,943,658...92,039,890 		JBrowse link
G Rpl38 ribosomal protein L38 IEA MGI NCBI chr11:114,558,644...114,563,159
Ensembl chr11:114,559,350...114,563,157 		JBrowse link
G Sfn stratifin IAGP MGI PMID:6643653 NCBI chr 4:133,327,867...133,329,163
Ensembl chr 4:133,327,867...133,329,479 		JBrowse link
G Sh3pxd2a SH3 and PX domains 2A IEA MGI NCBI chr19:47,248,613...47,453,053
Ensembl chr19:47,248,613...47,452,840 		JBrowse link
G Shh sonic hedgehog IAGP MGI PMID:33869166 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Six1 sine oculis-related homeobox 1 IAGP MGI PMID:12834866 PMID:14695375 NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661 		JBrowse link
G Smg9 SMG9 nonsense mediated mRNA decay factor IEA MGI NCBI chr 7:24,099,106...24,122,197
Ensembl chr 7:24,099,044...24,122,203 		JBrowse link
G Tcof1 treacle ribosome biogenesis factor 1 IAGP MGI PMID:16938878 NCBI chr18:60,946,827...60,982,055
Ensembl chr18:60,946,827...60,982,043 		JBrowse link
G Vax1 ventral anterior homeobox 1 IAGP MGI PMID:28771384 NCBI chr19:59,152,912...59,158,829
Ensembl chr19:59,154,619...59,158,488 		JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 IAGP MGI PMID:10669096 PMID:11776395 NCBI chr18:5,591,330...5,775,468
Ensembl chr18:5,591,860...5,775,467 		JBrowse link
G Zfp423 zinc finger protein 423 IAGP MGI PMID:17521568 NCBI chr 8:88,388,438...88,688,665
Ensembl chr 8:88,388,438...88,686,223 		JBrowse link
absent nasal cavity term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col2a1 collagen, type II, alpha 1 IAGP MGI PMID:20730911 NCBI chr15:97,873,483...97,902,525
Ensembl chr15:97,873,483...97,902,576 		JBrowse link
G Pgap1 post-GPI attachment to proteins 1 IAGP MGI PMID:17711852 NCBI chr 1:54,512,159...54,596,843
Ensembl chr 1:54,512,153...54,596,843 		JBrowse link
G Rdh10 retinol dehydrogenase 10 (all-trans) IAGP MGI PMID:17473173 NCBI chr 1:16,176,106...16,202,774
Ensembl chr 1:16,175,998...16,203,958 		JBrowse link
nasal obstruction term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp7 bone morphogenetic protein 7 IAGP MGI PMID:33431521 NCBI chr 2:172,709,805...172,782,114
Ensembl chr 2:172,709,805...172,782,114 		JBrowse link
G Ccno cyclin O IAGP MGI PMID:25712475 NCBI chr13:113,124,363...113,127,313
Ensembl chr13:113,124,336...113,127,311 		JBrowse link
G H2az2 H2A.Z histone variant 2 IAGP MGI PMID:33431521 NCBI chr11:6,377,226...6,394,511
Ensembl chr11:6,377,229...6,394,443 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 16883
    respiratory system phenotype 1853
      abnormal respiratory system morphology 1274
        abnormal nose morphology 283
          abnormal nasal cavity morphology 38
            absent nasal cavity 3
            nasal obstruction 3
Path 2
Term Annotations click to browse term
  mammalian phenotype 16883
    craniofacial phenotype 1638
      abnormal craniofacial morphology 1638
        abnormal facial morphology 1102
          abnormal nose morphology 283
            abnormal nasal cavity morphology 38
              absent nasal cavity 3
              nasal obstruction 3
paths to the root