Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:cytoskeleton of presynaptic active zone
go back to main search page
Accession:GO:0048788 term browser browse the term
Definition:The specialized cytoskeletal matrix of the presynaptic active zone. It has specialized functions in organizing synaptic events such as immobilisation or translocation of synaptic vesicles, and assembling active zone components. It is believed to form a molecular scaffold that organizes neurotransmitter release sites.
Synonyms:exact_synonym: active zone cytomatrix;   presynaptic cytomatrix assembled at active zones;   presynaptic cytoskeletal matrix;   presynaptic cytoskeletal matrix assembled at active zones
 narrow_synonym: CAZ;   T-bar;   T-bar ribbon;   pre-synaptic dense body;   presynaptic dense body;   synaptic ribbon
 related_synonym: pre-synaptic cytoskeletal matrix assembled at active zones;   pre-synaptic ribbon;   presynaptic ribbon;   ribbon
 xref: NIF_Subcellular:sao1470121605


show annotations for term's descendants           Sort by:
cytoskeleton of presynaptic active zone term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bsn bassoon (presynaptic cytomatrix protein) located_in
is_active_in		 IDA
IBA		 PMID:9679147
GO_REF:0000033		 GO_Central
RGD		 PMID:11596050 PMID:9679147 GO_REF:0000033, RGD:9850129, RGD:69780 NCBI chr 8:108,784,849...108,875,819
Ensembl chr 8:108,788,542...108,875,819 		JBrowse link
G Erc1 ELKS/RAB6-interacting/CAST family member 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:152,763,664...153,055,724
Ensembl chr 4:152,767,419...153,055,639 		JBrowse link
G Erc2 ELKS/RAB6-interacting/CAST family member 2 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:2,812,712...3,673,624
Ensembl chr16:2,848,620...3,670,776 		JBrowse link
G Pclo piccolo (presynaptic cytomatrix protein) is_active_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:11596050 GO_REF:0000033, RGD:9850129 NCBI chr 4:19,691,439...20,050,015
Ensembl chr 4:19,695,315...20,049,885 		JBrowse link
G Rims1 regulating synaptic membrane exocytosis 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:24,696,959...25,196,404
Ensembl chr 9:24,698,854...25,196,631 		JBrowse link
G Rims2 regulating synaptic membrane exocytosis 2 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:70,248,104...70,759,134
Ensembl chr 7:70,243,872...70,757,491 		JBrowse link
G Rims3 regulating synaptic membrane exocytosis 3 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:134,429,092...134,468,935
Ensembl chr 5:134,435,829...134,640,489 		JBrowse link
G Rims4 regulating synaptic membrane exocytosis 4 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:152,520,982...152,585,070
Ensembl chr 3:152,524,095...152,584,780 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20630
    cellular anatomical entity 20391
      presynaptic active zone 144
        presynaptic active zone cytoplasmic component 22
          cytoskeleton of presynaptic active zone 8
            presynaptic density + 0
Path 2
Term Annotations click to browse term
  cellular_component 20630
    cellular anatomical entity 20391
      organelle 13803
        non-membrane-bounded organelle 5219
          intracellular non-membrane-bounded organelle 5217
            cytoskeleton 2355
              cortical cytoskeleton 127
                cytoskeleton of presynaptic active zone 8
                  presynaptic density + 0
paths to the root