ONTOLOGY REPORT - ANNOTATIONS
Term: histone H3K9 demethylase activity
Accession: GO:0032454
browse the term
Definition: Catalysis of the removal of a methyl group from a modified lysine residue at position 9 of the histone H3 protein.
Synonyms: exact_synonym: histone H3-K49 demethylase activity; histone H3-methyl-lysine-9 demethylase activity; histone demethylase activity (H3-K9 specific)
xref: reactome:R-HSA-9011949 "KDM4B demethylates H3K9me3 on estrogen-responsive target enhancers"; reactome:R-HSA-9011985 "KDM1A demethylates H3 on MYC and BCL genes in response to estrogen"; reactome:R-HSA-997263 "JMJD1C demethylates H3K9 mono- and di-methylation"
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Hr
HR, lysine demethylase and nuclear receptor corepressor
enables
IEA IBA
GO_REF:0000002 GO_REF:0000118 GO_REF:0000033
InterPro TreeGrafter GO_Central
GO_REF:0000002 GO_REF:0000033 GO_REF:0000118
NCBI chr15:45,626,835...45,646,313
Ensembl chr15:45,626,835...45,646,313
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Jmjd1c
jumonji domain containing 1C
enables
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:21,332,147...21,494,220
Ensembl chr20:21,332,147...21,463,122
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Kdm1a
lysine demethylase 1A
enables
ISO
(PMID:16079795), (PMID:20228790)
RGD
PMID:16079795 PMID:20228790
NCBI chr 5:148,782,976...148,838,319
Ensembl chr 5:148,782,976...148,838,319
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Kdm3a
lysine demethylase 3A
enables
ISO IBA IEA
(PMID:28262558) MGI:3764891 (PMID:17938240), (PMID:17943087), (PMID:17991879) GO_REF:0000033 GO_REF:0000118 GO_REF:0000002
RGD GO_Central TreeGrafter InterPro
PMID:17938240 PMID:17943087 PMID:17991879 PMID:28262558
GO_REF:0000002 GO_REF:0000033 GO_REF:0000118
NCBI chr 4:103,630,907...103,675,073
Ensembl chr 4:103,630,908...103,675,073
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Kdm3b
lysine demethylase 3B
enables
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr18:26,380,859...26,436,701
Ensembl chr18:26,380,964...26,436,628
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Kdm4a
lysine demethylase 4A
enables
IBA ISO
GO_REF:0000033 (PMID:16738407)
GO_Central RGD
PMID:16738407
GO_REF:0000033
NCBI chr 5:131,672,754...131,719,534
Ensembl chr 5:131,672,754...131,719,501
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Kdm4b
lysine demethylase 4B
enables
ISO IBA
(PMID:28262558) (PMID:16738407) GO_REF:0000033
RGD GO_Central
PMID:16738407 PMID:28262558
GO_REF:0000033
NCBI chr 9:1,158,737...1,237,233
Ensembl chr 9:1,158,752...1,236,543
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Kdm4c
lysine demethylase 4C
enables
ISO IBA
(PMID:18066052), (PMID:28262558) (PMID:16738407), (PMID:17938240) GO_REF:0000033
RGD GO_Central
PMID:16738407 PMID:17938240 PMID:18066052 PMID:28262558
GO_REF:0000033
NCBI chr 5:88,100,710...88,306,821
Ensembl chr 5:88,100,733...88,306,818
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Kdm4d
lysine demethylase 4D
enables
ISO IBA
(PMID:25124442) MGI:5051955 (PMID:16738407), (PMID:21293030), (PMID:24550317) GO_REF:0000033
RGD GO_Central
PMID:16738407 PMID:21293030 PMID:24550317 PMID:25124442
GO_REF:0000033
NCBI chr 8:11,279,756...11,304,920
Ensembl chr 8:11,268,859...11,305,290
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Kdm7a
lysine demethylase 7A
enables
ISO
(PMID:20023638), (PMID:20194436), (PMID:20622853) (MGI:4437342|PMID:20194436)
RGD
PMID:20023638 PMID:20194436 PMID:20622853
MGI:4437342
NCBI chr 4:67,899,407...67,974,264
Ensembl chr 4:67,904,307...67,966,998
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Phf2
PHD finger protein 2
enables
ISO
(PMID:21532585)
RGD
PMID:21532585
NCBI chr17:15,783,221...15,851,209
Ensembl chr17:15,781,864...15,851,208
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Phf8
PHD finger protein 8
enables
ISO
(PMID:20023638), (PMID:20208542), (PMID:20346720), (PMID:20622853), (PMID:20622854)
RGD
PMID:20023638 PMID:20208542 PMID:20346720 PMID:20622853 PMID:20622854
NCBI chr X:20,524,103...20,623,459
Ensembl chr X:20,524,558...20,623,410
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Hr
HR, lysine demethylase and nuclear receptor corepressor
enables
IEA
GO_REF:0000003 GO_REF:0000116
UniProt RHEA
GO_REF:0000003 GO_REF:0000116
NCBI chr15:45,626,835...45,646,313
Ensembl chr15:45,626,835...45,646,313
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Kdm3a
lysine demethylase 3A
enables
ISO IEA
(PMID:16603237) GO_REF:0000107
RGD Ensembl
PMID:16603237
GO_REF:0000107
NCBI chr 4:103,630,907...103,675,073
Ensembl chr 4:103,630,908...103,675,073
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Kdm1a
lysine demethylase 1A
enables
ISO
(MGI:4838688|PMID:20833138)
RGD
PMID:20833138
MGI:4838688
NCBI chr 5:148,782,976...148,838,319
Ensembl chr 5:148,782,976...148,838,319
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Kdm4a
lysine demethylase 4A
enables
ISO
(PMID:21914792)
RGD
PMID:21914792
NCBI chr 5:131,672,754...131,719,534
Ensembl chr 5:131,672,754...131,719,501
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Kdm4b
lysine demethylase 4B
enables
ISO
(PMID:21914792)
RGD
PMID:21914792
NCBI chr 9:1,158,737...1,237,233
Ensembl chr 9:1,158,752...1,236,543
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Kdm4c
lysine demethylase 4C
enables contributes_to
ISO
(PMID:21914792) (PMID:17277772)
RGD
PMID:17277772 PMID:21914792
NCBI chr 5:88,100,710...88,306,821
Ensembl chr 5:88,100,733...88,306,818
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Kdm4d
lysine demethylase 4D
enables
ISO
(PMID:21914792)
RGD
PMID:21914792
NCBI chr 8:11,279,756...11,304,920
Ensembl chr 8:11,268,859...11,305,290
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