Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:intraciliary transport particle
go back to main search page
Accession:GO:0030990 term browser browse the term
Definition:A nonmembrane-bound oligomeric protein complex that participates in bidirectional transport of molecules (cargo) along axonemal microtubules.
Comment:Note that we deem cilia and microtubule-based flagella to be equivalent.
Synonyms:exact_synonym: intraflagellar transport complex;   intraflagellar transport particle
 related_synonym: IFT complex


show annotations for term's descendants           Sort by:
intraciliary transport particle A term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cluap1 clusterin associated protein 1 part_of IEA
ISO		 GO_REF:0000107
(PMID:26980730)		 Ensembl
RGD		 PMID:26980730 GO_REF:0000107 NCBI chr10:11,587,963...11,619,711
Ensembl chr10:11,588,017...11,619,711 		JBrowse link
G Ift122 intraflagellar transport 122 part_of
located_in		 ISO
IBA		 (PMID:20889716), (PMID:27932497), (PMID:29220510), (PMID:30476139)
GO_REF:0000033
(PMID:27173435)		 RGD
GO_Central		 PMID:20889716 PMID:27173435 PMID:27932497 PMID:29220510 PMID:30476139 GO_REF:0000033 NCBI chr 4:148,905,031...148,975,458
Ensembl chr 4:148,905,046...148,975,458 		JBrowse link
G Ift140 intraflagellar transport 140 part_of
located_in		 ISO
IBA		 (PMID:20889716), (PMID:27932497)
GO_REF:0000033
(PMID:27173435)		 RGD
GO_Central		 PMID:20889716 PMID:27173435 PMID:27932497 GO_REF:0000033 NCBI chr10:14,032,665...14,121,682
Ensembl chr10:14,032,648...14,120,433 		JBrowse link
G Ift43 intraflagellar transport 43 part_of
located_in		 ISO
IBA		 (PMID:20889716), (PMID:27932497)
GO_REF:0000033
(PMID:27173435)		 RGD
GO_Central		 PMID:20889716 PMID:27173435 PMID:27932497 GO_REF:0000033 NCBI chr 6:105,729,734...105,806,257
Ensembl chr 6:105,729,792...105,806,257 		JBrowse link
G Ttc21a tetratricopeptide repeat domain 21A part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:119,667,044...119,702,028
Ensembl chr 8:119,666,933...119,702,456 		JBrowse link
G Ttc21b tetratricopeptide repeat domain 21B part_of
located_in		 ISO
IBA		 (PMID:20889716), (PMID:27932497)
GO_REF:0000033
(PMID:27173435)		 RGD
GO_Central		 PMID:20889716 PMID:27173435 PMID:27932497 GO_REF:0000033 NCBI chr 3:50,861,367...50,935,880
Ensembl chr 3:50,861,367...50,935,903 		JBrowse link
G Wdr19 WD repeat domain 19 part_of
located_in		 ISO
IBA		 (PMID:20889716), (PMID:27932497)
GO_REF:0000033
(PMID:27173435)		 RGD
GO_Central		 PMID:20889716 PMID:27173435 PMID:27932497 GO_REF:0000033 NCBI chr14:43,042,474...43,106,337
Ensembl chr14:43,042,478...43,106,288 		JBrowse link
G Wdr35 WD repeat domain 35 part_of
located_in		 ISS
ISO
IBA
IEA		 GO_REF:0000024
(PMID:20889716)
GO_REF:0000033
GO_REF:0000104
(PMID:27173435)
(PMID:20889716), (PMID:27932497)		 UniProt
RGD
GO_Central		 PMID:20889716 PMID:27173435 PMID:27932497 GO_REF:0000024 GO_REF:0000033 GO_REF:0000104 NCBI chr 6:31,771,315...31,831,450
Ensembl chr 6:31,771,360...31,831,029 		JBrowse link
intraciliary transport particle B term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07063281.1 part_of IEA GO_REF:0000107
GO_REF:0000118		 Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118
G Cluap1 clusterin associated protein 1 located_in
part_of		 ISO
IEA
IBA		 (PMID:26980730)
GO_REF:0000107
GO_REF:0000033
GO_REF:0000118
(PMID:19253336)		 RGD
Ensembl
GO_Central
TreeGrafter		 PMID:19253336 PMID:26980730 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr10:11,587,963...11,619,711
Ensembl chr10:11,588,017...11,619,711 		JBrowse link
G Ift172 intraflagellar transport 172 part_of
located_in		 ISS
ISO
IEA
IBA		 GO_REF:0000024
(PMID:26980730)
GO_REF:0000107
GO_REF:0000033
GO_REF:0000118
(MGI:5607391|PMID:24596149), (MGI:5613829|PMID:25443296), (PMID:23055941)		 UniProt
RGD
Ensembl
GO_Central
TreeGrafter		 PMID:23055941 PMID:24596149 PMID:25443296 PMID:26980730 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:5607391 MGI:5613829 NCBI chr 6:25,081,933...25,121,271
Ensembl chr 6:25,081,980...25,120,860 		JBrowse link
G Ift20 intraflagellar transport 20 located_in
part_of		 ISO
IBA		 (PMID:26980730)
GO_REF:0000033
(MGI:5607391|PMID:24596149), (MGI:5613829|PMID:25443296), (PMID:12821668), (PMID:16775004), (PMID:19253336)		 RGD
GO_Central		 PMID:12821668 PMID:16775004 PMID:19253336 PMID:24596149 PMID:25443296 More... GO_REF:0000033 MGI:5607391 MGI:5613829 NCBI chr10:63,432,597...63,438,125
Ensembl chr10:63,432,633...63,438,124 		JBrowse link
G Ift22 intraflagellar transport 22 part_of
located_in		 ISS
ISO
IEA		 GO_REF:0000024
(PMID:26980730)
GO_REF:0000107
(MGI:5607391|PMID:24596149), (MGI:5613829|PMID:25443296), (PMID:19253336)		 UniProt
RGD
Ensembl		 PMID:19253336 PMID:24596149 PMID:25443296 PMID:26980730 GO_REF:0000024 GO_REF:0000107 MGI:5607391 MGI:5613829 NCBI chr12:19,759,072...19,768,859
Ensembl chr12:19,761,790...19,768,809 		JBrowse link
G Ift25 intraflagellar transport 25 located_in
part_of		 ISO
IBA		 (PMID:26980730)
GO_REF:0000033
(MGI:5607391|PMID:24596149), (PMID:19253336)		 RGD
GO_Central		 PMID:19253336 PMID:24596149 PMID:26980730 GO_REF:0000033 MGI:5607391 NCBI chr 5:122,035,588...122,062,421
Ensembl chr 5:122,035,581...122,062,421 		JBrowse link
G Ift27 intraflagellar transport 27 part_of
located_in		 ISO
IBA		 (PMID:25443296)
(PMID:26980730)
GO_REF:0000033
(MGI:5607391|PMID:24596149), (PMID:19253336), (PMID:23055941), (PMID:23810713)		 RGD
GO_Central		 PMID:19253336 PMID:23055941 PMID:23810713 PMID:24596149 PMID:25443296 More... GO_REF:0000033 MGI:5607391 NCBI chr 7:109,738,622...109,754,416
Ensembl chr 7:109,738,622...109,754,416 		JBrowse link
G Ift46 intraflagellar transport 46 part_of
located_in		 ISS
ISO
IEA
IBA		 GO_REF:0000024
(PMID:26980730)
GO_REF:0000107
GO_REF:0000033
GO_REF:0000118
(MGI:5607391|PMID:24596149), (MGI:5613829|PMID:25443296), (PMID:17312020), (PMID:19253336)		 UniProt
RGD
Ensembl
GO_Central
TreeGrafter		 PMID:17312020 PMID:19253336 PMID:24596149 PMID:25443296 PMID:26980730 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:5607391 MGI:5613829 NCBI chr 8:45,081,593...45,104,052
Ensembl chr 8:45,087,440...45,104,052 		JBrowse link
G Ift52 intraflagellar transport 52 located_in
part_of		 ISO
IBA		 (PMID:26980730)
GO_REF:0000033
(MGI:5607391|PMID:24596149), (MGI:5613829|PMID:25443296), (PMID:12821668), (PMID:19253336), (PMID:23810713)		 RGD
GO_Central		 PMID:12821668 PMID:19253336 PMID:23810713 PMID:24596149 PMID:25443296 More... GO_REF:0000033 MGI:5607391 MGI:5613829 NCBI chr 3:151,672,505...151,696,975
Ensembl chr 3:151,672,493...151,696,980 		JBrowse link
G Ift56 intraflagellar transport 56 part_of
located_in		 ISS
ISO
IEA
IBA		 GO_REF:0000024
(MGI:5607391|PMID:24596149)
(PMID:26980730)
GO_REF:0000118
GO_REF:0000033		 UniProt
RGD
TreeGrafter
GO_Central		 PMID:24596149 PMID:26980730 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 MGI:5607391 NCBI chr 4:67,090,622...67,154,707
Ensembl chr 4:67,090,660...67,147,903 		JBrowse link
G Ift57 intraflagellar transport 57 located_in
part_of		 ISO
IBA		 (PMID:26980730)
GO_REF:0000033
(MGI:5607391|PMID:24596149), (MGI:5613829|PMID:25443296), (PMID:12821668), (PMID:19253336), (PMID:23810713)		 RGD
GO_Central		 PMID:12821668 PMID:19253336 PMID:23810713 PMID:24596149 PMID:25443296 More... GO_REF:0000033 MGI:5607391 MGI:5613829 NCBI chr11:51,051,520...51,124,909
Ensembl chr11:51,059,611...51,124,812 		JBrowse link
G Ift70a1 intraflagellar transport 70A1 part_of ISO (PMID:23810713) RGD PMID:23810713 NCBI chr 3:60,901,896...60,905,350
Ensembl chr 3:60,901,896...60,905,350 		JBrowse link
G Ift70a2 intraflagellar transport 70A2 part_of IBA
ISO		 GO_REF:0000033
(PMID:23810713)		 GO_Central
RGD		 PMID:23810713 GO_REF:0000033 NCBI chr 3:60,899,193...60,901,634
Ensembl chr 3:60,899,196...60,901,634 		JBrowse link
G Ift70b intraflagellar transport 70B located_in
part_of		 ISO
IBA		 (PMID:26980730)
GO_REF:0000033
(PMID:23810713)		 RGD
GO_Central		 PMID:23810713 PMID:26980730 GO_REF:0000033 NCBI chr 3:60,855,809...60,858,380
Ensembl chr 3:60,855,575...60,858,389 		JBrowse link
G Ift74 intraflagellar transport 74 located_in
part_of		 ISO
IBA		 (PMID:26980730)
GO_REF:0000033
(MGI:5607391|PMID:24596149), (MGI:5613829|PMID:25443296), (PMID:19253336), (PMID:23810713)		 RGD
GO_Central		 PMID:19253336 PMID:23810713 PMID:24596149 PMID:25443296 PMID:26980730 GO_REF:0000033 MGI:5607391 MGI:5613829 NCBI chr 5:109,460,372...109,563,839
Ensembl chr 5:109,474,255...109,563,833 		JBrowse link
G Ift80 intraflagellar transport 80 part_of
located_in		 ISS
ISO
IEA
IBA		 GO_REF:0000024
(PMID:26980730)
GO_REF:0000118
GO_REF:0000033
(MGI:5607391|PMID:24596149), (MGI:5613829|PMID:25443296), (PMID:19253336), (PMID:23810713)		 UniProt
RGD
TreeGrafter
GO_Central		 PMID:19253336 PMID:23810713 PMID:24596149 PMID:25443296 PMID:26980730 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 MGI:5607391 MGI:5613829 NCBI chr 2:153,144,707...153,240,024
Ensembl chr 2:153,145,795...153,240,024 		JBrowse link
G Ift81 intraflagellar transport 81 part_of
located_in		 ISS
ISO
IEA
IBA		 GO_REF:0000024
(PMID:26980730)
GO_REF:0000002
GO_REF:0000107
GO_REF:0000118
GO_REF:0000033
(MGI:5607391|PMID:24596149), (MGI:5613829|PMID:25443296), (PMID:19253336), (PMID:23055941), (PMID:23810713)		 UniProt
RGD
InterPro
Ensembl
TreeGrafter
GO_Central		 PMID:19253336 PMID:23055941 PMID:23810713 PMID:24596149 PMID:25443296 More... GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:5607391 MGI:5613829 NCBI chr12:33,957,744...34,037,164
Ensembl chr12:33,957,806...34,037,057 		JBrowse link
G Ift88 intraflagellar transport 88 located_in
part_of		 ISO (PMID:26980730)
(MGI:5607391|PMID:24596149), (MGI:5613829|PMID:25443296), (PMID:12821668), (PMID:19253336), (PMID:23810713)		 RGD PMID:12821668 PMID:19253336 PMID:23810713 PMID:24596149 PMID:25443296 More... MGI:5607391 MGI:5613829 NCBI chr15:31,573,325...31,666,068
Ensembl chr15:31,573,376...31,672,147 		JBrowse link
G Rabl2 RAB, member of RAS oncogene family like 2 part_of ISO (PMID:23055941) RGD PMID:23055941 NCBI chr 7:120,652,175...120,660,906
Ensembl chr 7:120,652,175...120,660,783 		JBrowse link
G Traf3ip1 TRAF3 interacting protein 1 part_of
located_in		 ISS
ISO
IEA
IBA		 GO_REF:0000024
(PMID:26980730)
GO_REF:0000107
GO_REF:0000033
GO_REF:0000118
(MGI:5607391|PMID:24596149), (MGI:5613829|PMID:25443296), (PMID:19253336)		 UniProt
RGD
Ensembl
GO_Central
TreeGrafter		 PMID:19253336 PMID:24596149 PMID:25443296 PMID:26980730 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:5607391 MGI:5613829 NCBI chr 9:92,073,622...92,110,427
Ensembl chr 9:92,073,640...92,108,977 		JBrowse link
G Trim59 tripartite motif-containing 59 NOT|part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:153,269,210...153,281,185
Ensembl chr 2:153,268,584...153,281,031 		JBrowse link
G Ubxn10 UBX domain protein 10 located_in ISO (PMID:26389662) RGD PMID:26389662 NCBI chr 5:150,953,772...150,959,608
Ensembl chr 5:150,950,731...150,959,744 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21392
    protein-containing complex 6987
      intraciliary transport particle 29
        intraciliary transport particle A 8
        intraciliary transport particle B 22
paths to the root