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ONTOLOGY REPORT - ANNOTATIONS

Term:very-low-density lipoprotein particle
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Accession:GO:0034361 term browser browse the term
Definition:A triglyceride-rich lipoprotein particle that is typically composed of APOB100, APOE and APOCs and has a density of about 1.006 g/ml and a diameter of between 20-80 nm. It is found in blood and transports endogenous products (newly synthesized cholesterol and triglycerides) from the liver.
Synonyms:exact_synonym: VLDL complex;   VLDL particle;   very-low-density lipoprotein complex


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very-low-density lipoprotein particle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa1 apolipoprotein A1 part_of ISO
IBA
IEA		 (PMID:17154273)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:17154273 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:46,527,251...46,529,035
Ensembl chr 8:46,527,144...46,529,035 		JBrowse link
G Apoa2 apolipoprotein A2 part_of ISO (PMID:8245722) RGD PMID:8245722 NCBI chr13:83,644,460...83,646,358
Ensembl chr13:83,644,470...83,646,355 		JBrowse link
G Apoa4 apolipoprotein A4 part_of IEA
IBA
ISO		 GO_REF:0000107
GO_REF:0000033
(PMID:17154273), (PMID:3095477)		 Ensembl
GO_Central
RGD		 PMID:3095477 PMID:17154273 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:46,539,083...46,541,464
Ensembl chr 8:46,539,082...46,541,469 		JBrowse link
G Apoa5 apolipoprotein A5 part_of ISO
IBA
IEA		 (PMID:15528295)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:15528295 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:46,561,180...46,563,818
Ensembl chr 8:46,561,229...46,563,816 		JBrowse link
G Apob apolipoprotein B part_of IDA
IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
(PMID:15308631), (PMID:4363408)		 GO_Central
Ensembl
RGD		 PMID:4363408 PMID:15308631 PMID:17500069 PMID:12091487 GO_REF:0000033 GO_REF:0000107, RGD:2325767, RGD:1626402 NCBI chr 6:30,844,386...30,883,983
Ensembl chr 6:30,844,368...30,892,497 		JBrowse link
G Apoc1 apolipoprotein C1 part_of IDA
IBA
ISO		 GO_REF:0000033
(PMID:15576844)		 GO_Central
RGD		 PMID:15576844 PMID:16282639 GO_REF:0000033, RGD:2313954 NCBI chr 1:79,347,057...79,350,340
Ensembl chr 1:79,346,136...79,350,375 		JBrowse link
G Apoc2 apolipoprotein C2 part_of ISO
IEA		 (PMID:8245722)
GO_REF:0000104		 RGD
UniProt		 PMID:8245722 GO_REF:0000104 NCBI chr 1:79,329,429...79,334,397
Ensembl chr 1:79,329,428...79,334,476 		JBrowse link
G Apoc3 apolipoprotein C3 part_of ISO
IBA
IEA		 (PMID:16935699), (PMID:17154273), (PMID:3973011)
GO_REF:0000033
GO_REF:0000043		 RGD
GO_Central
UniProt		 PMID:3973011 PMID:16935699 PMID:17154273 GO_REF:0000033 GO_REF:0000043 NCBI chr 8:46,531,478...46,533,658
Ensembl chr 8:46,531,478...46,533,583 		JBrowse link
G Apoc4 apolipoprotein C4 part_of ISO
IBA		 (PMID:12700345), (PMID:17154273), (PMID:8827523)
GO_REF:0000033
(MGI:3850623|PMID:12700345)		 RGD
GO_Central		 PMID:8827523 PMID:12700345 PMID:17154273 GO_REF:0000033 MGI:3850623 NCBI chr 1:79,335,745...79,339,942
Ensembl chr 1:79,335,745...79,339,981 		JBrowse link
G Apoe apolipoprotein E part_of
is_active_in		 IDA
IBA
IEA
ISO		 PMID:9211985
GO_REF:0000033
GO_REF:0000043
(PMID:7683668)
GO_REF:0000107
(PMID:17154273), (PMID:22138302), (PMID:2280190), (PMID:8071364), (PMID:8245722), (PMID:9211985)		 GO_Central
UniProt
RGD
Ensembl		 PMID:2280190 PMID:7683668 PMID:8071364 PMID:8245722 PMID:9211985 More... GO_REF:0000033 GO_REF:0000043 GO_REF:0000107, RGD:12790643 NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932 		JBrowse link
G Apoh apolipoprotein H part_of ISO (PMID:222615) RGD PMID:222615 NCBI chr10:93,342,435...93,356,334
Ensembl chr10:93,310,977...93,356,329 		JBrowse link
G Apom apolipoprotein M part_of ISO
IBA
IEA		 (PMID:17154273)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:17154273 GO_REF:0000033 GO_REF:0000107 NCBI chr20:3,690,950...3,693,550
Ensembl chr20:3,688,413...3,693,550 		JBrowse link
G App amyloid beta precursor protein part_of ISO UniProtKB:P02649 (PMID:9211985) RGD PMID:9211985 NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561 		JBrowse link
G Lpl lipoprotein lipase part_of IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:20,830,055...20,853,855
Ensembl chr16:20,829,465...20,855,249 		JBrowse link
G Lsr lipolysis stimulated lipoprotein receptor part_of IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:86,185,769...86,201,952
Ensembl chr 1:86,186,431...86,201,952 		JBrowse link
G Pcyox1 prenylcysteine oxidase 1 part_of ISO
IEA		 (PMID:17154273)
GO_REF:0000107		 RGD
Ensembl		 PMID:17154273 GO_REF:0000107 NCBI chr 4:118,832,114...118,842,951
Ensembl chr 4:118,830,638...118,842,951 		JBrowse link
G Selenos selenoprotein S part_of ISO
IEA		 (PMID:17374524)
GO_REF:0000107		 RGD
Ensembl		 PMID:17374524 GO_REF:0000107 NCBI chr 1:119,659,779...119,669,546
Ensembl chr 1:119,659,751...119,669,833 		JBrowse link
G Vldlr very low density lipoprotein receptor part_of IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:224,813,539...224,850,400
Ensembl chr 1:224,814,377...224,845,920 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20624
    cellular anatomical entity 20384
      extracellular space 1715
        plasma lipoprotein particle 31
          triglyceride-rich plasma lipoprotein particle 18
            very-low-density lipoprotein particle 18
Path 2
Term Annotations click to browse term
  cellular_component 20624
    cellular anatomical entity 20384
      extracellular region 2306
        extracellular space 1715
          plasma lipoprotein particle 31
            triglyceride-rich plasma lipoprotein particle 18
              very-low-density lipoprotein particle 18
paths to the root