ONTOLOGY REPORT - ANNOTATIONS
Term: RNA splicing, via transesterification reactions with bulged adenosine as nucleophile
Accession: GO:0000377
browse the term
Definition: Splicing of RNA via a series of two transesterification reactions with a bulged adenosine residue from the intron branch point as the initiating nucleophile. When the initial RNA for the splicing reaction is a single molecule (cis splicing), the excised intron is released in a lariat structure.
Synonyms: related_synonym: lariat RNA biosynthesis; lariat RNA formation
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Cdk13
cyclin dependent kinase 13
involved_in
ISO
(MGI:3699439|PMID:17261272)
UniProt
PMID:17261272
MGI:3699439
NCBI chrNW_004955460:3,590,854...3,701,148
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Celf4
CUGBP Elav-like family member 4
acts_upstream_of_or_within
ISO
(PMID:19720736)
MGI
PMID:19720736
NCBI chrNW_004955402:23,607,160...23,898,495
Ensembl chrNW_004955402:23,617,421...23,898,347
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Ddx17
DEAD-box helicase 17
involved_in
ISO
(PMID:24275493), (PMID:24910439) (MGI:5883203|PMID:24910439)
UniProt
PMID:24275493 PMID:24910439
MGI:5883203
NCBI chrNW_004955413:24,646,317...24,664,614
Ensembl chrNW_004955413:24,646,320...24,664,614
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Ddx5
DEAD-box helicase 5
involved_in
ISO
(PMID:24275493), (PMID:24910439) (MGI:5883203|PMID:24910439)
UniProt
PMID:24275493 PMID:24910439
MGI:5883203
NCBI chrNW_004955478:7,367,049...7,375,043
Ensembl chrNW_004955478:7,366,956...7,376,358
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Dhx9
DExH-box helicase 9
involved_in
ISO
(PMID:28221134)
UniProt
PMID:28221134
NCBI chrNW_004955406:21,697,813...21,743,551
Ensembl chrNW_004955406:21,697,813...21,745,011
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Esrp1
epithelial splicing regulatory protein 1
acts_upstream_of_or_within
ISO
(PMID:26371508)
MGI
PMID:26371508
NCBI chrNW_004955417:10,813,831...10,881,238
Ensembl chrNW_004955417:10,813,593...10,882,921
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Esrp2
epithelial splicing regulatory protein 2
acts_upstream_of_or_within
ISO
(PMID:26371508)
MGI
PMID:26371508
NCBI chrNW_004955484:8,426,453...8,433,902
Ensembl chrNW_004955484:8,426,453...8,433,893
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Hnrnpa1
heterogeneous nuclear ribonucleoprotein A1
acts_upstream_of_or_within
ISO
(PMID:15798186)
MGI
PMID:15798186
NCBI chrNW_004955458:1,530,163...1,536,874
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Hnrnpm
heterogeneous nuclear ribonucleoprotein M
involved_in
ISO
(PMID:19874820)
BHF-UCL
PMID:19874820
NCBI chrNW_004955563:933,824...975,064
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Mbnl1
muscleblind like splicing regulator 1
acts_upstream_of_or_within
ISO
(PMID:19075228) (PMID:19720736)
MGI
PMID:19075228 PMID:19720736
NCBI chrNW_004955448:3,864,862...4,065,122
Ensembl chrNW_004955448:3,864,843...4,065,122
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Pqbp1
polyglutamine binding protein 1
involved_in
ISO
(PMID:23512658) (MGI:5477858|PMID:23512658)
UniProt
PMID:23512658
MGI:5477858
NCBI chrNW_004955543:430,324...434,205
Ensembl chrNW_004955543:430,853...434,205
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Rbm17
RNA binding motif protein 17
involved_in
ISO
(PMID:17589525)
UniProt
PMID:17589525
NCBI chrNW_004955421:22,732,757...22,745,926
Ensembl chrNW_004955421:22,732,757...22,746,014
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Rsrc1
arginine and serine rich coiled-coil 1
acts_upstream_of_or_within
ISO
(PMID:15798186)
MGI
PMID:15798186
NCBI chrNW_004955448:8,947,553...9,249,465
Ensembl chrNW_004955448:8,951,336...9,326,257
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Sfpq
splicing factor proline and glutamine rich
involved_in
ISO
(PMID:19874820)
BHF-UCL
PMID:19874820
NCBI chrNW_004955452:13,267,968...13,283,823
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Sfswap
splicing factor SWAP
acts_upstream_of_or_within
ISO
(PMID:8940107)
MGI
PMID:8940107
NCBI chrNW_004955482:808,684...871,377
Ensembl chrNW_004955482:808,632...871,402
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Slu7
SLU7 homolog, splicing factor
involved_in
ISO
(PMID:15728250)
HGNC-UCL
PMID:15728250
NCBI chrNW_004955408:14,268,958...14,288,114
Ensembl chrNW_004955408:14,267,369...14,288,213
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Srsf1
serine and arginine rich splicing factor 1
involved_in
ISO
(PMID:8940107)
RGD GO_Central
PMID:8940107 PMID:23462647
RGD:11038736
NCBI chrNW_004955451:4,992,634...4,996,619
Ensembl chrNW_004955451:4,992,634...4,999,029
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Srsf6
serine and arginine rich splicing factor 6
involved_in
ISO
(PMID:22767602)
UniProt
PMID:22767602
NCBI chrNW_004955445:13,663,474...13,669,102
Ensembl chrNW_004955445:13,661,209...13,669,102
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Strap
serine/threonine kinase receptor associated protein
involved_in
ISO
(PMID:33230114)
MGI
PMID:33230114
NCBI chrNW_004955413:12,533,422...12,558,138
Ensembl chrNW_004955413:12,533,423...12,559,288
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Slu7
SLU7 homolog, splicing factor
involved_in
ISO
(PMID:15728250)
HGNC-UCL
PMID:15728250
NCBI chrNW_004955408:14,268,958...14,288,114
Ensembl chrNW_004955408:14,267,369...14,288,213
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Psip1
PC4 and SRSF1 interacting protein 1
involved_in
ISO
(PMID:9885563)
UniProt
PMID:9885563
NCBI chrNW_004955434:18,312,646...18,357,753
Ensembl chrNW_004955434:18,312,646...18,357,761
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Sfswap
splicing factor SWAP
acts_upstream_of_or_within
ISO
(PMID:8940107)
MGI
PMID:8940107
NCBI chrNW_004955482:808,684...871,377
Ensembl chrNW_004955482:808,632...871,402
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Srsf1
serine and arginine rich splicing factor 1
involved_in
ISO
(PMID:8940107), (PMID:9885563)
GO_Central
PMID:8940107 PMID:9885563
NCBI chrNW_004955451:4,992,634...4,996,619
Ensembl chrNW_004955451:4,992,634...4,999,029
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Srsf12
serine and arginine rich splicing factor 12
involved_in
ISO
(PMID:11684676)
UniProt
PMID:11684676
NCBI chrNW_004955411:15,851,482...15,918,864
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CUNH9orf78
chromosome unknown C9orf78 homolog
involved_in
ISO
(PMID:35241646)
UniProt
PMID:35241646
NCBI chrNW_004955513:38,060...43,450
Ensembl chrNW_004955513:38,060...43,450
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Dcps
decapping enzyme, scavenger
involved_in
ISO
(PMID:18426921)
UniProt
PMID:18426921
NCBI chrNW_004955412:27,326,946...27,367,455
Ensembl chrNW_004955412:27,326,971...27,367,342
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Ncbp2
nuclear cap binding protein subunit 2
involved_in
ISO
(PMID:18426921)
UniProt
PMID:18426921
NCBI chrNW_004955420:12,979,368...12,992,500
Ensembl chrNW_004955420:12,979,368...12,992,500
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Rbm22
RNA binding motif protein 22
involved_in
ISO
(PMID:22246180)
UniProt
PMID:22246180
NCBI chrNW_004955415:3,895,272...3,905,801
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Sde2
SDE2 telomere maintenance homolog
involved_in
ISO
(PMID:34365507)
UniProt
PMID:34365507
NCBI chrNW_004955489:181,425...210,966
Ensembl chrNW_004955489:180,414...210,900
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Wbp4
WW domain binding protein 4
involved_in
ISO
(PMID:19592703)
UniProt
PMID:19592703
NCBI chrNW_004955404:51,046,245...51,094,245
Ensembl chrNW_004955404:51,046,177...51,084,272
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Celf1
CUGBP Elav-like family member 1
involved_in acts_upstream_of_or_within
ISO
(PMID:11158314)
UniProt MGI
PMID:11158314
NCBI chrNW_004955422:742,017...817,649
Ensembl chrNW_004955422:742,017...817,647
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Celf2
CUGBP Elav-like family member 2
involved_in acts_upstream_of_or_within
ISO
(PMID:11158314)
UniProt MGI
PMID:11158314
NCBI chrNW_004955421:27,064,497...27,374,850
Ensembl chrNW_004955421:26,992,734...27,374,850
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Celf4
CUGBP Elav-like family member 4
acts_upstream_of_or_within
ISO
(PMID:11158314)
MGI
PMID:11158314
NCBI chrNW_004955402:23,607,160...23,898,495
Ensembl chrNW_004955402:23,617,421...23,898,347
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Khdc4
KH domain containing 4, pre-mRNA splicing factor
involved_in
ISO
(PMID:19641227)
UniProt
PMID:19641227
NCBI chrNW_004955545:2,100,440...2,120,412
Ensembl chrNW_004955545:2,100,440...2,120,411
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Mbnl1
muscleblind like splicing regulator 1
acts_upstream_of_or_within
ISO
(PMID:14671308), (PMID:16717059)
MGI
PMID:14671308 PMID:16717059
NCBI chrNW_004955448:3,864,862...4,065,122
Ensembl chrNW_004955448:3,864,843...4,065,122
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Nol3
nucleolar protein 3
involved_in
ISO
(PMID:10196175)
UniProt
PMID:10196175
NCBI chrNW_004955484:9,443,090...9,447,142
Ensembl chrNW_004955484:9,443,090...9,447,095
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Ptbp2
polypyrimidine tract binding protein 2
acts_upstream_of_or_within
ISO
(PMID:10829067) (PMID:22802532)
MGI
PMID:10829067 PMID:22802532
NCBI chrNW_004955435:1,703,588...1,773,016
Ensembl chrNW_004955435:1,702,962...1,774,334
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Rbmx
RNA binding motif protein X-linked
ISO
RGD
PMID:19282290
RGD:2316827
NCBI chrNW_004955489:8,280,842...8,286,252
Ensembl chrNW_004955489:8,280,794...8,286,252
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Setx
senataxin
involved_in
ISO
(PMID:19515850)
UniProt
PMID:19515850
NCBI chrNW_004955513:1,718,432...1,776,133
Ensembl chrNW_004955513:1,718,377...1,777,021
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Srsf10
serine and arginine rich splicing factor 10
involved_in
ISO
(PMID:9774382)
UniProt
PMID:9774382
NCBI chrNW_004955452:3,831,545...3,846,292
Ensembl chrNW_004955452:3,831,552...3,846,449
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Srsf6
serine and arginine rich splicing factor 6
involved_in
ISO
(PMID:12549914)
UniProt
PMID:12549914
NCBI chrNW_004955445:13,663,474...13,669,102
Ensembl chrNW_004955445:13,661,209...13,669,102
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Ythdc1
YTH N6-methyladenosine RNA binding protein C1
involved_in
ISO
(PMID:20167602)
UniProt
PMID:20167602
NCBI chrNW_004955447:4,474,920...4,505,359
Ensembl chrNW_004955447:4,476,004...4,504,913
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Aqr
aquarius intron-binding spliceosomal factor
involved_in
ISO
(PMID:28076346)
UniProt
PMID:28076346
NCBI chrNW_004955416:2,214,990...2,304,924
Ensembl chrNW_004955416:2,215,490...2,304,726
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Bcas2
BCAS2 pre-mRNA processing factor
involved_in
ISO
(PMID:28076346)
UniProt
PMID:28076346
NCBI chrNW_004955435:17,830,532...17,857,360
Ensembl chrNW_004955435:17,846,466...17,857,356
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Bud13
BUD13 homolog
involved_in
ISO
(PMID:29360106)
UniProt
PMID:29360106
NCBI chrNW_004955412:18,095,069...18,113,386
Ensembl chrNW_004955412:18,095,375...18,113,054
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Bud31
BUD31 homolog
involved_in
ISO
(PMID:28076346)
UniProt
PMID:28076346
NCBI chrNW_004955460:15,083,472...15,092,217
Ensembl chrNW_004955460:15,083,472...15,092,217
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Cactin
cactin, spliceosome C complex subunit
involved_in
ISO
(PMID:28062851)
UniProt
PMID:28062851
NCBI chrNW_004955495:5,561,359...5,571,945
Ensembl chrNW_004955495:5,561,979...5,571,682
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Casc3
CASC3 exon junction complex subunit
involved_in
ISO
(PMID:29301961)
UniProt
PMID:29301961
NCBI chrNW_004955451:14,784,915...14,804,191
Ensembl chrNW_004955451:14,784,915...14,806,773
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Cdc40
cell division cycle 40
involved_in
ISO
(PMID:28076346) (PMID:33220177)
UniProt
PMID:28076346 PMID:33220177
NCBI chrNW_004955411:34,966,797...35,007,577
Ensembl chrNW_004955411:34,966,339...35,007,558
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Cdc5l
cell division cycle 5 like
involved_in
ISO
(PMID:28076346)
UniProt
PMID:28076346
NCBI chrNW_004955437:9,990,613...10,032,034
Ensembl chrNW_004955437:9,990,613...10,032,034
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Cenatac
centrosomal AT-AC splicing factor
involved_in
ISO
(PMID:34009673)
UniProt
PMID:34009673
NCBI chrNW_004955412:20,113,844...20,126,783
Ensembl chrNW_004955412:20,113,375...20,126,656
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Crnkl1
crooked neck pre-mRNA splicing factor 1
involved_in
ISO
(PMID:28076346)
UniProt
PMID:28076346
NCBI chrNW_004955415:28,158,351...28,171,335
Ensembl chrNW_004955415:28,158,351...28,172,055
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Cwc15
CWC15 spliceosome associated protein homolog
involved_in
ISO
(PMID:28076346)
UniProt
PMID:28076346
NCBI chrNW_004955605:32,721...42,981
Ensembl chrNW_004955605:32,721...46,182
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Cwc22
CWC22 spliceosome associated protein homolog
involved_in
ISO
(PMID:29360106)
UniProt
PMID:29360106
NCBI chrNW_004955403:17,070,588...17,125,918
Ensembl chrNW_004955403:17,083,414...17,125,982
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Cwc25
CWC25 spliceosome associated protein homolog
involved_in
ISO
(PMID:29301961)
UniProt
PMID:29301961
NCBI chrNW_004955451:13,867,570...13,884,433
Ensembl chrNW_004955451:13,868,845...13,884,267
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Ddx39a
DExD-box helicase 39A
involved_in
ISO
(PMID:15047853)
UniProt
PMID:15047853
NCBI chrNW_004955415:33,021,976...33,030,479
Ensembl chrNW_004955415:33,019,997...33,030,177
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Ddx39b
DExD-box helicase 39B
involved_in
ISO
(PMID:15047853)
UniProt
PMID:15047853
NCBI chrNW_004955437:72,835...84,045
Ensembl chrNW_004955437:72,835...84,384
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Ddx41
DEAD-box helicase 41
involved_in
ISO
(PMID:25920683)
UniProt
PMID:25920683
NCBI chrNW_004955408:29,748,091...29,753,610
Ensembl chrNW_004955408:29,744,751...29,754,497
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Ddx46
DEAD-box helicase 46
involved_in
ISO
(PMID:32494006), (PMID:34822310), (PMID:36797247)
UniProt
PMID:32494006 PMID:34822310 PMID:36797247
NCBI chrNW_004955408:29,981,509...30,031,473
Ensembl chrNW_004955408:29,981,229...30,031,473
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Dhx16
DEAH-box helicase 16
involved_in
ISO
(PMID:29360106) (PMID:20423332), (PMID:25296192)
UniProt
PMID:20423332 PMID:25296192 PMID:29360106
NCBI chrNW_004955583:657,425...668,390
Ensembl chrNW_004955583:654,921...668,392
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Dhx38
DEAH-box helicase 38
involved_in
ISO
(PMID:9524131)
UniProt
PMID:9524131
NCBI chrNW_004955484:4,752,834...4,770,843
Ensembl chrNW_004955484:4,752,834...4,770,843
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Dhx8
DEAH-box helicase 8
involved_in
ISO
(PMID:28076346)
UniProt
PMID:28076346
NCBI chrNW_004955451:16,941,422...16,963,690
Ensembl chrNW_004955451:16,941,215...16,965,093
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Eftud2
elongation factor Tu GTP binding domain containing 2
involved_in
ISO
(PMID:28076346)
UniProt
PMID:28076346
NCBI chrNW_004955451:17,655,659...17,690,117
Ensembl chrNW_004955451:17,653,125...17,690,117
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Eif4a3
eukaryotic translation initiation factor 4A3
involved_in
ISO
(PMID:29301961)
UniProt
PMID:29301961
NCBI chrNW_004955506:2,749,534...2,760,873
Ensembl chrNW_004955506:2,749,534...2,760,873
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Ess2
ess-2 splicing factor homolog
involved_in
ISO
(PMID:34694367)
UniProt
PMID:34694367
NCBI chrNW_004955442:18,829,037...18,840,542
Ensembl chrNW_004955442:18,828,976...18,840,542
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Fra10ac1
fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1
involved_in
ISO
(PMID:34694367)
UniProt
PMID:34694367
NCBI chrNW_004955507:182,212...242,313
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Gpkow
G-patch domain and KOW motifs
involved_in
ISO
(PMID:25296192)
UniProt
PMID:25296192
NCBI chrNW_004955543:625,247...633,065
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Hnrnpa2b1
heterogeneous nuclear ribonucleoprotein A2/B1
involved_in
ISO
(PMID:26321680)
UniProt
PMID:26321680
NCBI chrNW_004955410:28,032,193...28,042,459
Ensembl chrNW_004955410:28,032,193...28,042,459
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Hnrnpc
heterogeneous nuclear ribonucleoprotein C
involved_in
ISO
(PMID:25719671)
UniProt
PMID:25719671
NCBI chrNW_004955550:1,949,975...2,002,297
Ensembl chrNW_004955550:1,949,975...2,002,297
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Htatsf1
HIV-1 Tat specific factor 1
involved_in
ISO
(PMID:32494006), (PMID:34822310), (PMID:36797247)
UniProt
PMID:32494006 PMID:34822310 PMID:36797247
NCBI chrNW_004955489:8,607,649...8,622,044
Ensembl chrNW_004955489:8,607,629...8,622,044
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Ik
IK cytokine
involved_in
ISO
(PMID:28781166)
UniProt
PMID:28781166
NCBI chrNW_004955418:39,695...52,862
Ensembl chrNW_004955418:39,695...52,862
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Isy1
ISY1 splicing factor homolog
involved_in
ISO
(PMID:29301961)
UniProt
PMID:29301961
NCBI chrNW_004955429:13,513,191...13,527,516
Ensembl chrNW_004955429:13,511,914...13,527,516
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Lsm2
LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
involved_in
ISO
(PMID:28781166)
UniProt
PMID:28781166
NCBI chrNW_004955437:321,367...325,556
Ensembl chrNW_004955437:320,768...325,810
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Lsm3
LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated
involved_in acts_upstream_of_or_within
ISO
(PMID:28781166) (PMID:10369684), (PMID:10523320)
UniProt MGI
PMID:10369684 PMID:10523320 PMID:28781166
NCBI chrNW_004955429:16,968,490...16,977,517
Ensembl chrNW_004955429:16,968,490...16,977,517
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Lsm4
LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated
involved_in
ISO
(PMID:28781166)
UniProt
PMID:28781166
NCBI chrNW_004955524:3,157,607...3,165,196
Ensembl chrNW_004955524:3,157,607...3,165,196
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Lsm5
LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated
involved_in
ISO
(PMID:28781166)
UniProt
PMID:28781166
NCBI chrNW_004955617:42,829...47,999
Ensembl chrNW_004955617:42,447...47,999
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Lsm6
LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
involved_in
ISO
(PMID:28781166)
UniProt
PMID:28781166
NCBI chrNW_004955428:1,931,684...1,944,445
Ensembl chrNW_004955428:1,930,937...1,946,246
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Lsm7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
involved_in
ISO
(PMID:28781166)
UniProt
PMID:28781166
NCBI chrNW_004955495:5,829,976...5,836,785
Ensembl chrNW_004955495:5,829,247...5,836,900
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Lsm8
LSM8 homolog, U6 small nuclear RNA associated
involved_in
ISO
(PMID:28781166)
UniProt
PMID:28781166
NCBI chrNW_004955432:23,818,036...23,823,550
Ensembl chrNW_004955432:23,818,227...23,823,382
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Magohb
mago homolog B, exon junction complex subunit
involved_in
ISO
(PMID:28502770)
UniProt
PMID:28502770
NCBI chrNW_004955413:7,195,078...7,201,659
Ensembl chrNW_004955413:7,194,798...7,201,969
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Mettl14
methyltransferase 14, N6-adenosine-methyltransferase non-catalytic subunit
involved_in
ISO
(PMID:25719671)
UniProt
PMID:25719671
NCBI chrNW_004955428:21,475,981...21,507,730
Ensembl chrNW_004955428:21,475,981...21,507,730
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Mettl3
methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit
involved_in NOT|involved_in
ISO
(PMID:25719671), (PMID:26321680) (MGI:6095345|PMID:28637692) (MGI:5621227|PMID:25569111)
UniProt
PMID:25569111 PMID:25719671 PMID:26321680 PMID:28637692
MGI:5621227 MGI:6095345
NCBI chrNW_004955550:2,211,270...2,227,715
Ensembl chrNW_004955550:2,211,270...2,227,715
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Mfap1
microfibril associated protein 1
involved_in
ISO
(PMID:28781166)
UniProt
PMID:28781166
NCBI chrNW_004955416:10,263,729...10,273,403
Ensembl chrNW_004955416:10,263,729...10,274,188
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Nova1
NOVA alternative splicing regulator 1
acts_upstream_of_or_within
ISO
(PMID:10719891)
MGI
PMID:10719891
NCBI chrNW_004955409:33,681,947...33,820,356
Ensembl chrNW_004955409:33,680,587...33,815,818
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Phf5a
PHD finger protein 5A
involved_in
ISO
(PMID:12234937), (PMID:27720643), (PMID:29360106), (PMID:32494006), (PMID:34822310), (PMID:36797247)
UniProt
PMID:12234937 PMID:27720643 PMID:29360106 PMID:32494006 PMID:34822310 PMID:36797247 More...
NCBI chrNW_004955413:27,018,730...27,026,937
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Plrg1
pleiotropic regulator 1
involved_in
ISO
(PMID:28076346)
UniProt
PMID:28076346
NCBI chrNW_004955471:8,764,465...8,777,396
Ensembl chrNW_004955471:8,763,971...8,777,396
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Ppie
peptidylprolyl isomerase E
involved_in
ISO
(PMID:28076346)
UniProt
PMID:28076346
NCBI chrNW_004955452:17,242,255...17,256,776
Ensembl chrNW_004955452:17,242,286...17,254,860
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Ppil1
peptidylprolyl isomerase like 1
involved_in
ISO
(PMID:28076346) (PMID:33220177)
UniProt
PMID:28076346 PMID:33220177
NCBI chrNW_004955437:6,131,013...6,143,474
Ensembl chrNW_004955437:6,131,013...6,143,529
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Prpf19
pre-mRNA processing factor 19
involved_in
ISO
(PMID:20176811)
UniProt
PMID:20176811
NCBI chrNW_004955511:5,546,212...5,552,368
Ensembl chrNW_004955511:5,545,989...5,557,792
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Prpf3
pre-mRNA processing factor 3
involved_in
ISO
(PMID:28781166)
UniProt
PMID:28781166
NCBI chrNW_004955413:429,259...455,449
Ensembl chrNW_004955413:429,259...455,463
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Prpf31
pre-mRNA processing factor 31
involved_in acts_upstream_of_or_within
ISO
(PMID:28781166) (PMID:11867543)
UniProt MGI
PMID:11867543 PMID:28781166
NCBI chrNW_004955604:125,489...136,209
Ensembl chrNW_004955604:124,686...136,901
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Prpf38a
pre-mRNA processing factor 38A
involved_in
ISO
(PMID:26673105) (PMID:28781166)
UniProt
PMID:26673105 PMID:28781166
NCBI chrNW_004955464:6,742,200...6,761,059
Ensembl chrNW_004955464:6,742,200...6,761,059
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Prpf4
pre-mRNA splicing tri-snRNP complex factor PRPF4
involved_in
ISO
(PMID:28781166)
UniProt
PMID:28781166
NCBI chrNW_004955419:14,190,146...14,206,086
Ensembl chrNW_004955419:14,190,152...14,206,086
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Prpf8
pre-mRNA processing factor 8
involved_in
ISO
(PMID:28781166), (PMID:29301961)
UniProt
PMID:28781166 PMID:29301961
NCBI chrNW_004955481:1,499,634...1,530,670
Ensembl chrNW_004955481:1,499,634...1,530,670
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Rbm8a
RNA binding motif protein 8A
involved_in
ISO
(PMID:29301961)
UniProt
PMID:29301961
NCBI chrNW_004955568:164,050...166,162
Ensembl chrNW_004955568:164,050...166,162
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Rbmx2
RNA binding motif protein X-linked 2
involved_in
ISO
(PMID:29360106)
UniProt
PMID:29360106
NCBI chrNW_004955473:4,654,257...4,664,419
Ensembl chrNW_004955473:4,654,748...4,664,590
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Rnf113a
ring finger protein 113A
involved_in
ISO
(PMID:29360106)
UniProt
PMID:29360106
NCBI chrNW_004955534:154,242...155,474
Ensembl chrNW_004955534:154,380...155,417
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Rsrc1
arginine and serine rich coiled-coil 1
involved_in
ISO
(PMID:15798186)
UniProt
PMID:15798186
NCBI chrNW_004955448:8,947,553...9,249,465
Ensembl chrNW_004955448:8,951,336...9,326,257
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Sart1
spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP
involved_in
ISO
(PMID:28781166)
UniProt
PMID:28781166
NCBI chrNW_004955422:19,360,641...19,370,623
Ensembl chrNW_004955422:19,360,641...19,371,105
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Sart3
spliceosome associated factor 3, U4/U6 recycling protein
involved_in
ISO
(PMID:15314151)
UniProt
PMID:15314151
NCBI chrNW_004955455:9,802,260...9,833,326
Ensembl chrNW_004955455:9,802,260...9,832,957
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Sf3a1
splicing factor 3a subunit 1
involved_in
ISO
(PMID:10882114), (PMID:29360106), (PMID:32494006), (PMID:36797247)
UniProt
PMID:10882114 PMID:29360106 PMID:32494006 PMID:36797247
NCBI chrNW_004955455:4,579,153...4,601,942
Ensembl chrNW_004955455:4,577,329...4,602,141
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Sf3a2
splicing factor 3a subunit 2
involved_in
ISO
(PMID:29360106), (PMID:32494006), (PMID:34822310), (PMID:36797247)
UniProt
PMID:29360106 PMID:32494006 PMID:34822310 PMID:36797247
NCBI chrNW_004955495:5,896,648...5,904,287
Ensembl chrNW_004955495:5,896,648...5,904,056
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Sf3a3
splicing factor 3a subunit 3
involved_in
ISO
(PMID:29360106), (PMID:32494006), (PMID:34822310), (PMID:36797247)
UniProt
PMID:29360106 PMID:32494006 PMID:34822310 PMID:36797247
NCBI chrNW_004955452:15,691,729...15,715,782
Ensembl chrNW_004955452:15,691,497...15,716,524
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Sf3b1
splicing factor 3b subunit 1
acts_upstream_of_or_within involved_in
ISO
(PMID:11252167) (PMID:23211737) (PMID:27720643), (PMID:28781166), (PMID:29360106), (PMID:32494006), (PMID:34822310), (PMID:36797247)
MGI UniProt
PMID:11252167 PMID:23211737 PMID:27720643 PMID:28781166 PMID:29360106 PMID:32494006 PMID:34822310 PMID:36797247 More...
NCBI chrNW_004955403:3,134,960...3,163,395
Ensembl chrNW_004955403:3,134,955...3,166,121
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Sf3b2
splicing factor 3b subunit 2
involved_in
ISO
(PMID:27720643), (PMID:29360106), (PMID:32494006), (PMID:34822310), (PMID:36797247)
UniProt
PMID:27720643 PMID:29360106 PMID:32494006 PMID:34822310 PMID:36797247
NCBI chrNW_004955422:19,242,041...19,266,479
Ensembl chrNW_004955422:19,240,974...19,257,104
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Sf3b3
splicing factor 3b subunit 3
involved_in
ISO
(PMID:27720643), (PMID:28781166), (PMID:29360106), (PMID:32494006), (PMID:34822310), (PMID:36797247)
UniProt
PMID:27720643 PMID:28781166 PMID:29360106 PMID:32494006 PMID:34822310 PMID:36797247 More...
NCBI chrNW_004955484:3,307,794...3,357,600
Ensembl chrNW_004955484:3,307,794...3,357,600
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Sf3b4
splicing factor 3b subunit 4
involved_in
ISO
(PMID:27720643), (PMID:29360106), (PMID:32494006), (PMID:36797247)
ComplexPortal
PMID:27720643 PMID:29360106 PMID:32494006 PMID:36797247
NCBI chrNW_004955413:826,190...830,502
Ensembl chrNW_004955413:826,190...832,496
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Sf3b5
splicing factor 3b subunit 5
involved_in
ISO
(PMID:27720643), (PMID:28781166), (PMID:29360106), (PMID:32494006), (PMID:34822310), (PMID:36797247)
UniProt
PMID:27720643 PMID:28781166 PMID:29360106 PMID:32494006 PMID:34822310 PMID:36797247 More...
NCBI chrNW_004955436:16,380,412...16,381,373
Ensembl chrNW_004955436:16,380,549...16,380,809
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Sf3b6
splicing factor 3b subunit 6
involved_in acts_upstream_of_or_within
ISO
(PMID:27720643), (PMID:32494006), (PMID:34822310) (PMID:23211737)
UniProt MGI
PMID:23211737 PMID:27720643 PMID:32494006 PMID:34822310
NCBI chrNW_004955469:6,275,894...6,286,908
Ensembl chrNW_004955469:6,275,900...6,286,908
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Smu1
SMU1 DNA replication regulator and spliceosomal factor
involved_in
ISO
(PMID:28781166)
UniProt
PMID:28781166
NCBI chrNW_004955472:2,570,248...2,600,551
Ensembl chrNW_004955472:2,570,340...2,600,146
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Snip1
Smad nuclear interacting protein 1
involved_in
ISO
(PMID:29360106)
UniProt
PMID:29360106
NCBI chrNW_004955452:15,352,080...15,365,545
Ensembl chrNW_004955452:15,353,182...15,365,459
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Snrnp200
small nuclear ribonucleoprotein U5 subunit 200
involved_in
ISO
(PMID:29301961), (PMID:8670905)
UniProt
PMID:8670905 PMID:29301961
NCBI chrNW_004955470:3,828,943...3,856,059
Ensembl chrNW_004955470:3,828,943...3,856,236
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Snrnp70
small nuclear ribonucleoprotein U1 subunit 70
involved_in
ISO
(PMID:9531537)
UniProt
PMID:9531537
NCBI chrNW_004955559:1,618,246...1,634,144
Ensembl chrNW_004955559:1,614,039...1,634,142
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Snrpa1
small nuclear ribonucleoprotein polypeptide A'
involved_in
ISO
(PMID:28076346), (PMID:28781166), (PMID:32494006), (PMID:36797247)
UniProt
PMID:28076346 PMID:28781166 PMID:32494006 PMID:36797247
NCBI chrNW_004955416:28,166,885...28,178,404
Ensembl chrNW_004955416:28,166,821...28,178,404
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Snrpb
small nuclear ribonucleoprotein polypeptides B and B1
involved_in
ISO
(PMID:28076346), (PMID:28781166), (PMID:32494006), (PMID:36797247)
UniProt
PMID:28076346 PMID:28781166 PMID:32494006 PMID:36797247
NCBI chrNW_004955415:13,522,638...13,530,725
Ensembl chrNW_004955415:13,520,530...13,531,466
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Snrpb2
small nuclear ribonucleoprotein polypeptide B2
involved_in
ISO
(PMID:28076346), (PMID:28781166), (PMID:32494006), (PMID:36797247)
UniProt
PMID:28076346 PMID:28781166 PMID:32494006 PMID:36797247
NCBI chrNW_004955415:25,880,013...25,889,295
Ensembl chrNW_004955415:25,879,983...25,890,707
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Snrpc
small nuclear ribonucleoprotein polypeptide C
involved_in
ISO
(PMID:8972845)
UniProt
PMID:8972845
NCBI chrNW_004955437:2,770,251...2,830,871
Ensembl chrNW_004955437:2,813,296...2,831,036
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Snrpd1
small nuclear ribonucleoprotein D1 polypeptide
involved_in
ISO
(PMID:28076346), (PMID:32494006), (PMID:36797247)
UniProt
PMID:28076346 PMID:32494006 PMID:36797247
NCBI chrNW_004955402:10,283,970...10,294,869
Ensembl chrNW_004955402:10,283,970...10,296,495
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Snrpd2
small nuclear ribonucleoprotein D2 polypeptide
involved_in
ISO
(PMID:28076346), (PMID:32494006), (PMID:36797247)
UniProt
PMID:28076346 PMID:32494006 PMID:36797247
NCBI chrNW_004955574:157,769...164,947
Ensembl chrNW_004955574:157,769...164,947
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Snrpd3
small nuclear ribonucleoprotein D3 polypeptide
involved_in
ISO
(PMID:28076346), (PMID:32494006), (PMID:36797247)
UniProt
PMID:28076346 PMID:32494006 PMID:36797247
NCBI chrNW_004955455:8,021,946...8,045,325
Ensembl chrNW_004955455:8,021,946...8,046,439
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Snrpe
small nuclear ribonucleoprotein polypeptide E
involved_in
ISO
(PMID:28076346), (PMID:32494006), (PMID:36797247)
UniProt
PMID:28076346 PMID:32494006 PMID:36797247
NCBI chrNW_004955406:39,725,841...39,732,527
Ensembl chrNW_004955406:39,725,446...39,734,586
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Snrpf
small nuclear ribonucleoprotein polypeptide F
involved_in
ISO
(PMID:28076346), (PMID:32494006), (PMID:36797247)
UniProt
PMID:28076346 PMID:32494006 PMID:36797247
NCBI chrNW_004955405:32,236,876...32,242,716
Ensembl chrNW_004955405:32,236,876...32,242,716
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Snrpg
small nuclear ribonucleoprotein polypeptide G
involved_in
ISO
(PMID:28076346), (PMID:32494006), (PMID:36797247)
UniProt
PMID:28076346 PMID:32494006 PMID:36797247
NCBI chrNW_004955424:14,844,318...14,851,720
Ensembl chrNW_004955424:14,844,318...14,851,720
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Snu13
small nuclear ribonucleoprotein 13
involved_in
ISO
(PMID:28781166)
UniProt
PMID:28781166
NCBI chrNW_004955413:27,160,985...27,172,648
Ensembl chrNW_004955413:27,159,816...27,172,696
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Snw1
SNW domain containing 1
involved_in
ISO
(PMID:15194481), (PMID:28076346)
UniProt
PMID:15194481 PMID:28076346
NCBI chrNW_004955438:1,561,562...1,601,492
Ensembl chrNW_004955438:1,561,568...1,601,492
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Srrm2
serine/arginine repetitive matrix 2
involved_in
ISO
(PMID:28076346)
UniProt
PMID:28076346
NCBI chrNW_004955442:14,478,350...14,498,152
Ensembl chrNW_004955442:14,482,154...14,497,639
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Srsf10
serine and arginine rich splicing factor 10
involved_in
ISO
(PMID:9774382)
UniProt
PMID:9774382
NCBI chrNW_004955452:3,831,545...3,846,292
Ensembl chrNW_004955452:3,831,552...3,846,449
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Syf2
SYF2 pre-mRNA splicing factor
involved_in
ISO
(PMID:28076346)
UniProt
PMID:28076346
NCBI chrNW_004955452:4,850,049...4,856,647
Ensembl chrNW_004955452:4,848,659...4,857,114
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Tra2a
transformer 2 alpha homolog
involved_in
ISO
(PMID:9546399)
UniProt
PMID:9546399
NCBI chrNW_004955410:25,759,649...25,784,128
Ensembl chrNW_004955410:25,759,649...25,784,128
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Tra2b
transformer 2 beta homolog
involved_in acts_upstream_of
ISO
(PMID:9546399) (PMID:22194695)
UniProt MGI
PMID:9546399 PMID:22194695
NCBI chrNW_004955420:21,707,618...21,728,186
Ensembl chrNW_004955420:21,707,618...21,728,186
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Txnl4a
thioredoxin like 4A
involved_in
ISO
(PMID:28781166)
UniProt
PMID:28781166
NCBI chrNW_004955402:63,153,274...63,166,208
Ensembl chrNW_004955402:63,153,052...63,166,199
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U2af2
U2 small nuclear RNA auxiliary factor 2
involved_in
ISO
(PMID:1824937)
GO_Central
PMID:1824937
NCBI chrNW_004955567:683,472...699,105
Ensembl chrNW_004955567:683,078...697,996
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Usp39
ubiquitin specific peptidase 39
involved_in
ISO
(PMID:11350945)
UniProt
PMID:11350945
NCBI chrNW_004955424:1,867,910...1,893,338
Ensembl chrNW_004955424:1,867,850...1,894,157
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Usp49
ubiquitin specific peptidase 49
involved_in
ISO
(PMID:23824326)
UniProt
PMID:23824326
NCBI chrNW_004955437:8,187,118...8,237,910
Ensembl chrNW_004955437:8,191,236...8,198,809
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Wbp4
WW domain binding protein 4
involved_in
ISO
(PMID:28781166)
UniProt
PMID:28781166
NCBI chrNW_004955404:51,046,245...51,094,245
Ensembl chrNW_004955404:51,046,177...51,084,272
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Wdr83
WD repeat domain 83
involved_in
ISO
(PMID:11991638)
UniProt
PMID:11991638
NCBI chrNW_004955415:31,774,017...31,778,737
Ensembl chrNW_004955415:31,774,017...31,778,737
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Xab2
XPA binding protein 2
involved_in
ISO
(PMID:28076346)
UniProt
PMID:28076346
NCBI chrNW_004955563:1,630,403...1,638,333
Ensembl chrNW_004955563:1,630,403...1,641,037
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Ythdc1
YTH N6-methyladenosine RNA binding protein C1
ISO
RGD
PMID:10564280
RGD:634512
NCBI chrNW_004955447:4,474,920...4,505,359
Ensembl chrNW_004955447:4,476,004...4,504,913
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Zmat2
zinc finger matrin-type 2
involved_in
ISO
(PMID:28781166)
UniProt
PMID:28781166
NCBI chrNW_004955418:4,335...10,844
Ensembl chrNW_004955418:1,633...10,844
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Zrsr2
zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2
involved_in
ISO
(PMID:9237760)
UniProt
PMID:9237760
NCBI chrNW_004955519:2,377,955...2,402,446
Ensembl chrNW_004955519:2,378,246...2,394,561
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Acin1
apoptotic chromatin condensation inducer 1
involved_in
ISO
(PMID:12665594)
UniProt
PMID:12665594
NCBI chrNW_004955409:37,206,675...37,246,851
Ensembl chrNW_004955409:37,206,675...37,246,922
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C1qbp
complement C1q binding protein
involved_in
ISO
(PMID:10022843)
UniProt
PMID:10022843
NCBI chrNW_004955467:10,788,142...10,792,272
Ensembl chrNW_004955467:10,788,277...10,792,449
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Celf4
CUGBP Elav-like family member 4
acts_upstream_of_or_within
ISO
(PMID:23636947)
MGI
PMID:23636947
NCBI chrNW_004955402:23,607,160...23,898,495
Ensembl chrNW_004955402:23,617,421...23,898,347
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Dyrk1a
dual specificity tyrosine phosphorylation regulated kinase 1A
acts_upstream_of_or_within
ISO
(PMID:21470964)
MGI
PMID:21470964
NCBI chrNW_004955407:36,456,628...36,588,940
Ensembl chrNW_004955407:36,453,098...36,589,382
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Hnrnpa2b1
heterogeneous nuclear ribonucleoprotein A2/B1
acts_upstream_of_or_within
ISO
(PMID:18480465)
MGI
PMID:18480465
NCBI chrNW_004955410:28,032,193...28,042,459
Ensembl chrNW_004955410:28,032,193...28,042,459
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Hnrnpk
heterogeneous nuclear ribonucleoprotein K
acts_upstream_of_or_within
ISO
(PMID:23636947)
MGI
PMID:23636947
NCBI chrNW_004955432:3,246,090...3,257,774
Ensembl chrNW_004955432:3,246,092...3,257,774
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Hnrnpl
heterogeneous nuclear ribonucleoprotein L
ISO
RGD
PMID:22570490
RGD:9999428
NCBI chrNW_004955468:668,177...683,540
Ensembl chrNW_004955468:670,559...683,540
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Npm1
nucleophosmin 1
acts_upstream_of_or_within
ISO
(PMID:16376875)
MGI
PMID:16376875
NCBI chrNW_004955408:24,151,070...24,218,783
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Pcbp4
poly(rC) binding protein 4
acts_upstream_of_or_within
ISO
(PMID:23636947)
MGI
PMID:23636947
NCBI chrNW_004955532:3,604,720...3,615,112
Ensembl chrNW_004955532:3,603,975...3,614,290
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Ptbp1
polypyrimidine tract binding protein 1
involved_in acts_upstream_of_or_within
ISO
(PMID:15009664) (PMID:23636947) (MGI:6271441|PMID:17679093)
UniProt MGI ARUK-UCL
PMID:15009664 PMID:17679093 PMID:23636947
MGI:6271441
NCBI chrNW_004955495:6,990,565...7,002,492
Ensembl chrNW_004955495:6,987,182...7,002,492
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Ptbp3
polypyrimidine tract binding protein 3
acts_upstream_of_or_within
ISO
(PMID:23636947)
MGI
PMID:23636947
NCBI chrNW_004955419:15,002,780...15,101,588
Ensembl chrNW_004955419:15,000,072...15,101,588
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Rbm10
RNA binding motif protein 10
acts_upstream_of_or_within
ISO
(PMID:23636947)
MGI
PMID:23636947
NCBI chrNW_004955516:904,852...934,313
Ensembl chrNW_004955516:904,062...934,313
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Rbm20
RNA binding motif protein 20
involved_in
ISO
PMID:25573899 (PMID:24960161), (PMID:34732726) (MGI:5817050|PMID:27630136), (MGI:6162809|PMID:29895960), (MGI:6472247|PMID:33110103) PMID:23307558 PMID:35394688
UniProt
PMID:23307558 PMID:24960161 PMID:25573899 PMID:27630136 PMID:29895960 PMID:33110103 PMID:34732726 PMID:35394688 More...
MGI:5817050 MGI:6162809 MGI:6472247 RGD:152025504 RGD:152025505 RGD:152025509 RGD:152025519
NCBI chrNW_004955485:590,094...769,604
Ensembl chrNW_004955485:586,373...769,635
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Rbm42
RNA binding motif protein 42
acts_upstream_of_or_within
ISO
(PMID:23636947)
MGI
PMID:23636947
NCBI chrNW_004955468:4,844,780...4,854,261
Ensembl chrNW_004955468:4,844,747...4,854,504
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Rnps1
RNA binding protein with serine rich domain 1
involved_in
ISO
(PMID:12665594)
UniProt
PMID:12665594
NCBI chrNW_004955442:14,995,404...15,009,358
Ensembl chrNW_004955442:14,995,404...15,009,358
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Sap18
Sin3A associated protein 18
involved_in
ISO
(PMID:12665594)
UniProt
PMID:12665594
NCBI chrNW_004955497:1,862,026...1,869,974
Ensembl chrNW_004955497:1,867,771...1,869,974
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Sfswap
splicing factor SWAP
involved_in
ISO
PMID:15009664
UniProt
PMID:15009664
RGD:8554197
NCBI chrNW_004955482:808,684...871,377
Ensembl chrNW_004955482:808,632...871,402
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Srsf10
serine and arginine rich splicing factor 10
involved_in
ISO
(PMID:11684676) (MGI:3688015|PMID:11684676)
UniProt
PMID:11684676
MGI:3688015
NCBI chrNW_004955452:3,831,545...3,846,292
Ensembl chrNW_004955452:3,831,552...3,846,449
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Srsf4
serine and arginine rich splicing factor 4
involved_in
ISO
(PMID:15009664)
UniProt
PMID:15009664
NCBI chrNW_004955452:8,143,850...8,174,830
Ensembl chrNW_004955452:8,142,500...8,174,869
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Srsf6
serine and arginine rich splicing factor 6
involved_in
ISO
(PMID:15009664)
UniProt
PMID:15009664
NCBI chrNW_004955445:13,663,474...13,669,102
Ensembl chrNW_004955445:13,661,209...13,669,102
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Srsf7
serine and arginine rich splicing factor 7
involved_in
ISO
(PMID:15009664)
UniProt
PMID:15009664
NCBI chrNW_004955441:6,416,709...6,423,185
Ensembl chrNW_004955441:6,416,952...6,423,074
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Srsf9
serine and arginine rich splicing factor 9
involved_in
ISO
(PMID:15009664)
UniProt
PMID:15009664
NCBI chrNW_004955455:11,175,760...11,183,597
Ensembl chrNW_004955455:11,175,760...11,183,597
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U2af2
U2 small nuclear RNA auxiliary factor 2
involved_in
ISO
(PMID:15009664)
UniProt
PMID:15009664
NCBI chrNW_004955567:683,472...699,105
Ensembl chrNW_004955567:683,078...697,996
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Eif1
eukaryotic translation initiation factor 1
acts_upstream_of_or_within
ISO
(PMID:16789828)
MGI
PMID:16789828
NCBI chrNW_004955451:15,978,571...15,980,352
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Exosc10
exosome component 10
acts_upstream_of_or_within
ISO
(PMID:16789828)
MGI
PMID:16789828
NCBI chrNW_004955486:2,601,362...2,626,451
Ensembl chrNW_004955486:2,601,322...2,626,876
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Upf1
UPF1 RNA helicase and ATPase
acts_upstream_of_or_within
ISO
(PMID:16789828)
MGI
PMID:16789828
NCBI chrNW_004955524:2,798,336...2,814,063
Ensembl chrNW_004955524:2,798,336...2,913,176
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Upf3a
UPF3A regulator of nonsense mediated mRNA decay
acts_upstream_of_or_within
ISO
(PMID:16789828)
MGI
PMID:16789828
NCBI chrNW_004955404:25,556...36,730
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Upf3b
UPF3B regulator of nonsense mediated mRNA decay
acts_upstream_of_or_within
ISO
(PMID:16789828)
MGI
PMID:16789828
NCBI chrNW_004955534:176,553...193,033
Ensembl chrNW_004955534:176,522...193,319
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Celf3
CUGBP Elav-like family member 3
involved_in
ISO
(PMID:15009664)
UniProt
PMID:15009664
NCBI chrNW_004955589:700,965...715,684
Ensembl chrNW_004955589:701,767...713,179
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Celf4
CUGBP Elav-like family member 4
involved_in
ISO
(PMID:15009664)
UniProt
PMID:15009664
NCBI chrNW_004955402:23,607,160...23,898,495
Ensembl chrNW_004955402:23,617,421...23,898,347
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Dazap1
DAZ associated protein 1
acts_upstream_of_or_within
ISO
(PMID:23636947)
MGI
PMID:23636947
NCBI chrNW_004955495:6,499,553...6,516,227
Ensembl chrNW_004955495:6,497,890...6,524,462
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Eif4a3
eukaryotic translation initiation factor 4A3
acts_upstream_of_or_within
ISO
(PMID:18480465)
MGI
PMID:18480465
NCBI chrNW_004955506:2,749,534...2,760,873
Ensembl chrNW_004955506:2,749,534...2,760,873
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Hmx2
H6 family homeobox 2
acts_upstream_of_or_within
ISO
(PMID:23636947)
MGI
PMID:23636947
NCBI chrNW_004955477:1,294,479...1,302,433
Ensembl chrNW_004955477:1,294,472...1,302,505
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Hspa8
heat shock protein family A (Hsp70) member 8
acts_upstream_of_or_within
ISO
(PMID:23636947)
MGI
PMID:23636947
NCBI chrNW_004955412:23,863,513...23,867,984
Ensembl chrNW_004955412:23,862,590...23,867,984
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Lmntd2
lamin tail domain containing 2
acts_upstream_of_or_within
ISO
(PMID:23636947)
MGI
PMID:23636947
NCBI chrNW_004955476:11,487,918...11,493,281
Ensembl chrNW_004955476:11,489,481...11,493,923
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Ncbp1
nuclear cap binding protein subunit 1
involved_in
ISO
(PMID:23793891)
CAFA
PMID:23793891
NCBI chrNW_004955419:27,778,300...27,819,878
Ensembl chrNW_004955419:27,778,300...27,819,878
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Nup98
nucleoporin 98 and 96 precursor
involved_in
ISO
(PMID:28221134)
UniProt
PMID:28221134
NCBI chrNW_004955414:19,499,577...19,607,075
Ensembl chrNW_004955414:19,499,406...19,607,075
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Obi1
ORC ubiquitin ligase 1
acts_upstream_of_or_within
ISO
(PMID:23636947)
MGI
PMID:23636947
NCBI chrNW_004955404:28,759,640...28,803,257
Ensembl chrNW_004955404:28,758,918...28,804,972
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Prdx6
peroxiredoxin 6
involved_in
ISO
(PMID:16186110)
UniProt
PMID:16186110
NCBI chrNW_004955406:13,717,267...13,728,216
Ensembl chrNW_004955406:13,717,267...13,728,216
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Prpf19
pre-mRNA processing factor 19
acts_upstream_of_or_within
ISO
(PMID:18480465)
MGI
PMID:18480465
NCBI chrNW_004955511:5,546,212...5,552,368
Ensembl chrNW_004955511:5,545,989...5,557,792
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Sf3b4
splicing factor 3b subunit 4
acts_upstream_of_or_within
ISO
(PMID:23636947)
MGI
PMID:23636947
NCBI chrNW_004955413:826,190...830,502
Ensembl chrNW_004955413:826,190...832,496
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Slc39a5
solute carrier family 39 member 5
acts_upstream_of_or_within
ISO
(PMID:23636947)
MGI
PMID:23636947
NCBI chrNW_004955458:3,843,492...3,849,794
Ensembl chrNW_004955458:3,843,112...3,849,794
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Snrnp70
small nuclear ribonucleoprotein U1 subunit 70
acts_upstream_of_or_within
ISO
(PMID:23636947)
MGI
PMID:23636947
NCBI chrNW_004955559:1,618,246...1,634,144
Ensembl chrNW_004955559:1,614,039...1,634,142
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Snw1
SNW domain containing 1
involved_in
ISO
(PMID:12840015)
UniProt
PMID:12840015
NCBI chrNW_004955438:1,561,562...1,601,492
Ensembl chrNW_004955438:1,561,568...1,601,492
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Thrap3
thyroid hormone receptor associated protein 3
involved_in
ISO
(PMID:20123736)
UniProt
PMID:20123736
NCBI chrNW_004955452:14,233,155...14,282,521
Ensembl chrNW_004955452:14,233,155...14,283,886
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Tra2a
transformer 2 alpha homolog
acts_upstream_of_or_within
ISO
(PMID:22194695)
MGI
PMID:22194695
NCBI chrNW_004955410:25,759,649...25,784,128
Ensembl chrNW_004955410:25,759,649...25,784,128
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Tra2b
transformer 2 beta homolog
involved_in acts_upstream_of_or_within
ISO
(PMID:15009664) (PMID:22194695)
UniProt MGI
PMID:15009664 PMID:22194695
NCBI chrNW_004955420:21,707,618...21,728,186
Ensembl chrNW_004955420:21,707,618...21,728,186
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Arb2a
ARB2 cotranscriptional regulator A
involved_in
ISO
(MGI:6113784|PMID:29311329)
UniProt
PMID:29311329
MGI:6113784
NCBI chrNW_004955418:18,213,824...18,624,082
Ensembl chrNW_004955418:18,245,947...18,589,185
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Celf1
CUGBP Elav-like family member 1
acts_upstream_of_or_within
ISO
(PMID:32109384)
MGI
PMID:32109384
NCBI chrNW_004955422:742,017...817,649
Ensembl chrNW_004955422:742,017...817,647
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Celf3
CUGBP Elav-like family member 3
involved_in
ISO
(PMID:11158314)
UniProt
PMID:11158314
NCBI chrNW_004955589:700,965...715,684
Ensembl chrNW_004955589:701,767...713,179
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Celf4
CUGBP Elav-like family member 4
involved_in acts_upstream_of_or_within
ISO
(PMID:11158314) (PMID:19720736)
UniProt MGI
PMID:11158314 PMID:19720736
NCBI chrNW_004955402:23,607,160...23,898,495
Ensembl chrNW_004955402:23,617,421...23,898,347
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Celf5
CUGBP Elav-like family member 5
involved_in
ISO
(PMID:11158314)
UniProt
PMID:11158314
NCBI chrNW_004955495:5,182,758...5,214,724
Ensembl chrNW_004955495:5,185,126...5,214,718
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Celf6
CUGBP Elav-like family member 6
involved_in
ISO
(PMID:14761971)
UniProt
PMID:14761971
NCBI chrNW_004955450:4,822,125...4,853,572
Ensembl chrNW_004955450:4,822,125...4,855,238
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Ddx17
DEAD-box helicase 17
involved_in
ISO
(PMID:23022728) (MGI:5819339|PMID:23022728)
UniProt
PMID:23022728
MGI:5819339
NCBI chrNW_004955413:24,646,317...24,664,614
Ensembl chrNW_004955413:24,646,320...24,664,614
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Ddx5
DEAD-box helicase 5
involved_in
ISO
(PMID:21343338) (MGI:5819339|PMID:23022728) (PMID:23022728)
UniProt
PMID:21343338 PMID:23022728
MGI:5819339
NCBI chrNW_004955478:7,367,049...7,375,043
Ensembl chrNW_004955478:7,366,956...7,376,358
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Dyrk1a
dual specificity tyrosine phosphorylation regulated kinase 1A
involved_in
ISO
PMID:22767602
UniProt
PMID:22767602
RGD:8554210
NCBI chrNW_004955407:36,456,628...36,588,940
Ensembl chrNW_004955407:36,453,098...36,589,382
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Fmr1
Fragile X messenger ribonucleoprotein 1
involved_in
ISO
(PMID:18653529) (MGI:5009520|PMID:18653529)
UniProt
PMID:18653529
MGI:5009520
NCBI chrNW_004955498:566,741...594,837
Ensembl chrNW_004955498:566,688...595,360
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Hnrnpa1
heterogeneous nuclear ribonucleoprotein A1
involved_in
ISO
(PMID:25689357)
CAFA
PMID:25689357
NCBI chrNW_004955458:1,530,163...1,536,874
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Hnrnpl
heterogeneous nuclear ribonucleoprotein L
involved_in
ISO
(PMID:25623890) (MGI:5441689|PMID:22523384)
UniProt
PMID:22523384 PMID:25623890
MGI:5441689
NCBI chrNW_004955468:668,177...683,540
Ensembl chrNW_004955468:670,559...683,540
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Hnrnpu
heterogeneous nuclear ribonucleoprotein U
involved_in
ISO
(PMID:22325991)
UniProt
PMID:22325991
NCBI chrNW_004955406:8,000,269...8,021,554
Ensembl chrNW_004955406:8,000,269...8,021,554
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Khdrbs1
KH RNA binding domain containing, signal transduction associated 1
involved_in
ISO
(PMID:24514149) PMID:15345239
UniProt
PMID:15345239 PMID:24514149
RGD:1358238
NCBI chrNW_004955452:10,413,883...10,458,518
Ensembl chrNW_004955452:10,413,883...10,440,678
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Khdrbs3
KH RNA binding domain containing, signal transduction associated 3
involved_in
ISO
PMID:15345239
UniProt
PMID:15345239
RGD:1358238
NCBI chrNW_004955461:9,751,057...9,926,211
Ensembl chrNW_004955461:9,751,057...9,915,943
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Magoh
mago homolog, exon junction complex subunit
involved_in
ISO
(PMID:22203037)
UniProt
PMID:22203037
NCBI chrNW_004955464:5,919,289...5,929,152
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Mbnl1
muscleblind like splicing regulator 1
involved_in
ISO
PMID:31283468
UniProt
PMID:31283468
RGD:243049249
NCBI chrNW_004955448:3,864,862...4,065,122
Ensembl chrNW_004955448:3,864,843...4,065,122
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Mbnl2
muscleblind like splicing regulator 2
involved_in acts_upstream_of_or_within
ISO
PMID:31283468 (PMID:19720736)
UniProt MGI
PMID:19720736 PMID:31283468
RGD:243049249
NCBI chrNW_004955404:12,979,671...13,132,239
Ensembl chrNW_004955404:12,979,235...13,132,361
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Myod1
myogenic differentiation 1
acts_upstream_of_or_within
ISO
(PMID:9525963)
MGI
PMID:9525963
NCBI chrNW_004955414:32,523,959...32,526,575
Ensembl chrNW_004955414:32,523,924...32,526,674
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Nova1
NOVA alternative splicing regulator 1
involved_in
ISO
(MGI:5789071|PMID:27223325), (MGI:6718240|PMID:14615540) (MGI:6716952|PMID:17065982)
UniProt
PMID:14615540 PMID:17065982 PMID:27223325
MGI:5789071 MGI:6716952 MGI:6718240
NCBI chrNW_004955409:33,681,947...33,820,356
Ensembl chrNW_004955409:33,680,587...33,815,818
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Nova2
NOVA alternative splicing regulator 2
involved_in
ISO
(PMID:32197073) (MGI:3587155|PMID:16041372), (MGI:5789071|PMID:27223325), (MGI:6716952|PMID:17065982), (MGI:6718240|PMID:14615540)
UniProt
PMID:14615540 PMID:16041372 PMID:17065982 PMID:27223325 PMID:32197073
MGI:3587155 MGI:5789071 MGI:6716952 MGI:6718240
NCBI chrNW_004955574:360,822...361,459
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Nsrp1
nuclear speckle splicing regulatory protein 1
involved_in
ISO
(PMID:21296756)
UniProt
PMID:21296756
NCBI chrNW_004955481:3,142,009...3,192,060
Ensembl chrNW_004955481:3,138,059...3,192,066
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Ptbp1
polypyrimidine tract binding protein 1
involved_in
ISO
(PMID:16260624), (PMID:21518792)
UniProt
PMID:16260624 PMID:21518792
NCBI chrNW_004955495:6,990,565...7,002,492
Ensembl chrNW_004955495:6,987,182...7,002,492
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Rbfox1
RNA binding fox-1 homolog 1
acts_upstream_of_or_within
ISO
(PMID:23300487)
MGI
PMID:23300487
NCBI chrNW_004955442:10,345,261...10,694,602
Ensembl chrNW_004955442:10,344,365...10,908,434
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Rbfox2
RNA binding fox-1 homolog 2
involved_in acts_upstream_of_or_within
ISO
(MGI:3770484|PMID:17715393), (MGI:5284784|PMID:17101796) (PMID:22357600) PMID:37548402 Cacna1c Atp2b1, Mef2a Fxr1, Mef2a, Mtmr3 Mcl1
BHF-UCL MGI UniProt RGD
PMID:17101796 PMID:17715393 PMID:22357600 PMID:27239029 PMID:28993448 PMID:31778749 PMID:35641779 PMID:37548402 More...
MGI:3770484 MGI:5284784 RGD:329845872 RGD:329845873 RGD:329845874 RGD:329848961 RGD:401901235
NCBI chrNW_004955413:22,034,048...22,288,430
Ensembl chrNW_004955413:22,035,837...22,287,763
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Rbm11
RNA binding motif protein 11
acts_upstream_of_or_within
ISO
(PMID:21984414)
MGI
PMID:21984414
NCBI chrNW_004955407:16,071,186...16,082,332
Ensembl chrNW_004955407:16,071,208...16,081,949
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Rbm15
RNA binding motif protein 15
involved_in
ISO
(PMID:26575292) (MGI:6158801|PMID:25468569)
UniProt
PMID:25468569 PMID:26575292
MGI:6158801
NCBI chrNW_004955435:13,846,297...13,854,639
Ensembl chrNW_004955435:13,846,297...13,854,639
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Rbm15b
RNA binding motif protein 15B
involved_in
ISO
(PMID:16129689)
UniProt
PMID:16129689
NCBI chrNW_004955532:3,080,207...3,082,312
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Rbm20
RNA binding motif protein 20
involved_in
ISO
PMID:27289039 PMID:33805770
UniProt
PMID:27289039 PMID:33805770
RGD:152995553 RGD:152995577
NCBI chrNW_004955485:590,094...769,604
Ensembl chrNW_004955485:586,373...769,635
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Rbm24
RNA binding motif protein 24
involved_in
ISO
(PMID:26844700), (PMID:26990106), (PMID:29104163) PMID:27289039 (MGI:6148527|PMID:25313962)
UniProt
PMID:25313962 PMID:26844700 PMID:26990106 PMID:27289039 PMID:29104163
MGI:6148527 RGD:152995577
NCBI chrNW_004955483:8,705,533...8,716,772
Ensembl chrNW_004955483:8,705,213...8,716,778
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Rbm25
RNA binding motif protein 25
involved_in
ISO
(PMID:18663000)
UniProt
PMID:18663000
NCBI chrNW_004955523:2,213,766...2,270,417
Ensembl chrNW_004955523:2,213,766...2,270,597
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Rbm47
RNA binding motif protein 47
involved_in
ISO
(PMID:31358901)
UniProt
PMID:31358901
NCBI chrNW_004955443:6,940,523...7,100,130
Ensembl chrNW_004955443:6,940,523...7,100,130
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Rbm5
RNA binding motif protein 5
involved_in
ISO
(PMID:18840686), (PMID:18951082)
UniProt
PMID:18840686 PMID:18951082
NCBI chrNW_004955532:1,929,540...1,957,297
Ensembl chrNW_004955532:1,929,043...1,956,812
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Rbm8a
RNA binding motif protein 8A
involved_in
ISO
(PMID:22203037)
UniProt
PMID:22203037
NCBI chrNW_004955568:164,050...166,162
Ensembl chrNW_004955568:164,050...166,162
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Rbmx
RNA binding motif protein X-linked
involved_in
ISO
(PMID:12165565), (PMID:12761049)
UniProt
PMID:12165565 PMID:12761049
NCBI chrNW_004955489:8,280,842...8,286,252
Ensembl chrNW_004955489:8,280,794...8,286,252
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Rbpms
RNA binding protein, mRNA processing factor
involved_in
ISO
PMID:37548402
UniProt
PMID:37548402
RGD:401901235
NCBI chrNW_004955463:6,817,570...6,973,393
Ensembl chrNW_004955463:6,901,263...6,988,870
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Rbpms2
RNA binding protein, mRNA processing factor 2
involved_in
ISO
PMID:31283468
UniProt
PMID:31283468
RGD:243049249
NCBI chrNW_004955450:10,746,708...10,770,540
Ensembl chrNW_004955450:10,763,540...10,770,610
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Rnps1
RNA binding protein with serine rich domain 1
involved_in
ISO
(PMID:22203037)
UniProt
PMID:22203037
NCBI chrNW_004955442:14,995,404...15,009,358
Ensembl chrNW_004955442:14,995,404...15,009,358
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Sap18
Sin3A associated protein 18
involved_in
ISO
(PMID:22203037) (PMID:20966198)
UniProt
PMID:20966198 PMID:22203037
NCBI chrNW_004955497:1,862,026...1,869,974
Ensembl chrNW_004955497:1,867,771...1,869,974
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Srrm4
serine/arginine repetitive matrix 4
involved_in acts_upstream_of_or_within
ISO
(PMID:29961578) (PMID:23055939) (MGI:6201863|PMID:25727884)
UniProt MGI
PMID:23055939 PMID:25727884 PMID:29961578
MGI:6201863
NCBI chrNW_004955455:12,318,529...12,473,420
Ensembl chrNW_004955455:12,318,529...12,473,647
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Srsf12
serine and arginine rich splicing factor 12
involved_in
ISO
(PMID:11684676)
UniProt
PMID:11684676
NCBI chrNW_004955411:15,851,482...15,918,864
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Srsf2
serine and arginine rich splicing factor 2
acts_upstream_of_or_within
ISO
(PMID:21470964)
MGI
PMID:21470964
NCBI chrNW_004955506:5,569,280...5,572,164
Ensembl chrNW_004955506:5,569,302...5,570,120
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Srsf6
serine and arginine rich splicing factor 6
involved_in acts_upstream_of_or_within
ISO
(PMID:24440982) (PMID:23132731)
UniProt MGI
PMID:23132731 PMID:24440982
NCBI chrNW_004955445:13,663,474...13,669,102
Ensembl chrNW_004955445:13,661,209...13,669,102
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Thrap3
thyroid hormone receptor associated protein 3
involved_in
ISO
(PMID:20932480)
UniProt
PMID:20932480
NCBI chrNW_004955452:14,233,155...14,282,521
Ensembl chrNW_004955452:14,233,155...14,283,886
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Tia1
TIA1 cytotoxic granule associated RNA binding protein
involved_in
ISO
(PMID:14966131), (PMID:17580305) (MGI:6827199|PMID:11514562), (MGI:6827311|PMID:10938105)
UniProt
PMID:10938105 PMID:11514562 PMID:14966131 PMID:17580305
MGI:6827199 MGI:6827311
NCBI chrNW_004955424:14,887,722...14,920,844
Ensembl chrNW_004955424:14,887,659...14,921,588
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Tra2b
transformer 2 beta homolog
involved_in
ISO
(PMID:25689357) (PMID:12165565), (PMID:12761049)
CAFA UniProt
PMID:12165565 PMID:12761049 PMID:25689357
NCBI chrNW_004955420:21,707,618...21,728,186
Ensembl chrNW_004955420:21,707,618...21,728,186
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Wtap
WT1 associated protein
involved_in
ISO
(PMID:24407421)
UniProt
PMID:24407421
NCBI chrNW_004955439:21,149,970...21,174,479
Ensembl chrNW_004955439:21,146,206...21,182,486
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Ythdc1
YTH N6-methyladenosine RNA binding protein C1
acts_upstream_of_or_within
ISO
(PMID:29799838)
MGI
PMID:29799838
NCBI chrNW_004955447:4,474,920...4,505,359
Ensembl chrNW_004955447:4,476,004...4,504,913
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Zbtb7a
zinc finger and BTB domain containing 7A
involved_in
ISO
(PMID:24514149)
UniProt
PMID:24514149
NCBI chrNW_004955495:4,747,905...4,754,066
Ensembl chrNW_004955495:4,740,901...4,753,992
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Jmjd6
jumonji domain containing 6, arginine demethylase and lysine hydroxylase
involved_in
ISO
(PMID:19574390) (MGI:4940413|PMID:21300889)
UniProt
PMID:19574390 PMID:21300889
MGI:4940413
NCBI chrNW_004955506:5,577,735...5,588,307
Ensembl chrNW_004955506:5,577,437...5,588,372
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Khdrbs1
KH RNA binding domain containing, signal transduction associated 1
involved_in
ISO
(MGI:5302133|PMID:22196734)
UniProt
PMID:22196734
MGI:5302133
NCBI chrNW_004955452:10,413,883...10,458,518
Ensembl chrNW_004955452:10,413,883...10,440,678
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Khdrbs2
KH RNA binding domain containing, signal transduction associated 2
involved_in
ISO
(MGI:5302133|PMID:22196734)
UniProt
PMID:22196734
MGI:5302133
NCBI chrNW_004955502:1,486,799...1,944,298
Ensembl chrNW_004955502:1,509,237...1,943,297
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Khdrbs3
KH RNA binding domain containing, signal transduction associated 3
involved_in
ISO
(MGI:5302133|PMID:22196734)
UniProt
PMID:22196734
MGI:5302133
NCBI chrNW_004955461:9,751,057...9,926,211
Ensembl chrNW_004955461:9,751,057...9,915,943
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Larp7
La ribonucleoprotein 7, transcriptional regulator
involved_in
ISO
(PMID:32017898) (MGI:6400674|PMID:32017896)
UniProt
PMID:32017896 PMID:32017898
MGI:6400674
NCBI chrNW_004955457:14,178,674...14,200,164
Ensembl chrNW_004955457:14,178,947...14,192,193
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Mettl16
methyltransferase 16, RNA N6-adenosine
involved_in NOT|involved_in
ISO
(PMID:28525753) (MGI:6114846|PMID:29262316)
UniProt
PMID:28525753 PMID:29262316
MGI:6114846
NCBI chrNW_004955481:762,030...836,299
Ensembl chrNW_004955481:762,024...836,067
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Qki
QKI, KH domain containing RNA binding
involved_in
ISO
(PMID:27029405), (PMID:31331967), (PMID:34428287) (MGI:6504661|PMID:33397958), (MGI:6514532|PMID:33378678), (MGI:7485690|PMID:36627242) (MGI:6108922|PMID:29021242)
UniProt
PMID:27029405 PMID:29021242 PMID:31331967 PMID:33378678 PMID:33397958 PMID:34428287 PMID:36627242 More...
MGI:6108922 MGI:6504661 MGI:6514532 MGI:7485690
NCBI chrNW_004955439:17,925,205...18,079,727
Ensembl chrNW_004955439:17,925,229...18,079,727
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Rbm20
RNA binding motif protein 20
involved_in
ISO
(PMID:26604136), (PMID:27496873), (PMID:32840935) (PMID:33188278) (PMID:30948719)
UniProt
PMID:26604136 PMID:27496873 PMID:30948719 PMID:32840935 PMID:33188278
NCBI chrNW_004955485:590,094...769,604
Ensembl chrNW_004955485:586,373...769,635
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Rbm23
RNA binding motif protein 23
involved_in
ISO
(PMID:15694343)
UniProt
PMID:15694343
NCBI chrNW_004955409:37,384,872...37,392,896
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Rbm39
RNA binding motif protein 39
involved_in
ISO
(PMID:15694343) (PMID:28302793), (PMID:28437394)
UniProt
PMID:15694343 PMID:28302793 PMID:28437394
NCBI chrNW_004955422:25,719,771...25,755,757
Ensembl chrNW_004955422:25,719,771...25,755,757
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Son
SON DNA and RNA binding protein
involved_in
ISO
(PMID:21504830)
UniProt
PMID:21504830
NCBI chrNW_004955407:32,974,656...33,007,073
Ensembl chrNW_004955407:32,974,725...33,006,297
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Srsf10
serine and arginine rich splicing factor 10
involved_in
ISO
(PMID:26876937)
UniProt
PMID:26876937
NCBI chrNW_004955452:3,831,545...3,846,292
Ensembl chrNW_004955452:3,831,552...3,846,449
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Srsf3
serine and arginine rich splicing factor 3
involved_in
ISO
(PMID:26876937), (PMID:32440474)
UniProt
PMID:26876937 PMID:32440474
NCBI chrNW_004955437:6,306,151...6,314,332
Ensembl chrNW_004955437:6,306,151...6,314,332
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Tia1
TIA1 cytotoxic granule associated RNA binding protein
involved_in
ISO
(PMID:11106748), (PMID:7488725)
UniProt
PMID:7488725 PMID:11106748
NCBI chrNW_004955424:14,887,722...14,920,844
Ensembl chrNW_004955424:14,887,659...14,921,588
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Ythdc1
YTH N6-methyladenosine RNA binding protein C1
involved_in
ISO
(PMID:26876937), (PMID:28984244)
UniProt
PMID:26876937 PMID:28984244
NCBI chrNW_004955447:4,474,920...4,505,359
Ensembl chrNW_004955447:4,476,004...4,504,913
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Crnkl1
crooked neck pre-mRNA splicing factor 1
involved_in
ISO
(PMID:12084575)
UniProt
PMID:12084575
NCBI chrNW_004955415:28,158,351...28,171,335
Ensembl chrNW_004955415:28,158,351...28,172,055
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Ddx39b
DExD-box helicase 39B
involved_in
ISO
(PMID:18593880)
BHF-UCL
PMID:18593880
NCBI chrNW_004955437:72,835...84,045
Ensembl chrNW_004955437:72,835...84,384
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Gcfc2
GC-rich sequence DNA-binding factor 2
involved_in
ISO
(PMID:24304693)
UniProt
PMID:24304693
NCBI chrNW_004955424:10,174,291...10,202,201
Ensembl chrNW_004955424:10,173,652...10,200,641
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Ncbp1
nuclear cap binding protein subunit 1
involved_in
ISO
(PMID:23793891)
CAFA
PMID:23793891
NCBI chrNW_004955419:27,778,300...27,819,878
Ensembl chrNW_004955419:27,778,300...27,819,878
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Prpf19
pre-mRNA processing factor 19
involved_in
ISO
(PMID:16332694)
BHF-UCL
PMID:16332694
NCBI chrNW_004955511:5,546,212...5,552,368
Ensembl chrNW_004955511:5,545,989...5,557,792
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Rbm5
RNA binding motif protein 5
involved_in
ISO
(PMID:18951082)
UniProt
PMID:18951082
NCBI chrNW_004955532:1,929,540...1,957,297
Ensembl chrNW_004955532:1,929,043...1,956,812
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Rsrp1
arginine and serine rich protein 1
involved_in
ISO
(PMID:34042961)
UniProt
PMID:34042961
NCBI chrNW_004955452:4,865,330...4,871,049
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Scaf11
SR-related CTD associated factor 11
involved_in
ISO
(PMID:9447963)
UniProt
PMID:9447963
NCBI chrNW_004955500:5,187,112...5,229,929
Ensembl chrNW_004955500:5,186,954...5,229,887
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Srpk2
SRSF protein kinase 2
involved_in
ISO
(PMID:9472028) (MGI:1195449|PMID:9446799)
UniProt
PMID:9446799 PMID:9472028
MGI:1195449
NCBI chrNW_004955410:9,807,936...10,034,760
Ensembl chrNW_004955410:9,811,584...9,942,323
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Usp39
ubiquitin specific peptidase 39
involved_in
ISO
(PMID:11350945)
UniProt
PMID:11350945
NCBI chrNW_004955424:1,867,910...1,893,338
Ensembl chrNW_004955424:1,867,850...1,894,157
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Zrsr2
zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2
involved_in
ISO
(PMID:21041408)
UniProt
PMID:21041408
NCBI chrNW_004955519:2,377,955...2,402,446
Ensembl chrNW_004955519:2,378,246...2,394,561
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Tfip11
tuftelin interacting protein 11
involved_in
ISO
(PMID:19103666) (MGI:5545993|PMID:19857462)
UniProt
PMID:19103666 PMID:19857462
MGI:5545993
NCBI chrNW_004955455:1,083,816...1,097,233
Ensembl chrNW_004955455:1,083,816...1,097,233
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Clns1a
chloride nucleotide-sensitive channel 1A
involved_in
ISO
(PMID:18984161)
UniProt
PMID:18984161
NCBI chrNW_004955414:14,219,909...14,239,450
Ensembl chrNW_004955414:14,219,909...14,238,806
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Ddx20
DEAD-box helicase 20
involved_in
ISO
(PMID:18984161) (PMID:12067652)
UniProt ComplexPortal
PMID:12067652 PMID:18984161
NCBI chrNW_004955435:15,209,640...15,219,698
Ensembl chrNW_004955435:15,209,640...15,220,378
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Gemin2
gem nuclear organelle associated protein 2
involved_in
ISO
(PMID:18984161), (PMID:31799625) (PMID:12067652)
UniProt ComplexPortal
PMID:12067652 PMID:18984161 PMID:31799625
NCBI chrNW_004955409:22,142,082...22,153,699
Ensembl chrNW_004955409:22,142,078...22,153,698
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Gemin4
gem nuclear organelle associated protein 4
involved_in
ISO
(PMID:18984161) (PMID:12067652)
UniProt ComplexPortal
PMID:12067652 PMID:18984161
NCBI chrNW_004955481:2,294,406...2,301,297
Ensembl chrNW_004955481:2,294,406...2,301,297
G
Gemin5
gem nuclear organelle associated protein 5
involved_in
ISO
(PMID:18984161) (PMID:12067652)
UniProt ComplexPortal
PMID:12067652 PMID:18984161
NCBI chrNW_004955408:9,136,490...9,179,087
Ensembl chrNW_004955408:9,134,191...9,178,980
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Gemin6
gem nuclear organelle associated protein 6
involved_in
ISO
(PMID:18984161) (PMID:12067652)
UniProt ComplexPortal
PMID:12067652 PMID:18984161
NCBI chrNW_004955441:6,456,482...6,461,027
Ensembl chrNW_004955441:6,456,537...6,461,027
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Gemin8
gem nuclear organelle associated protein 8
involved_in
ISO
(PMID:16434402), (PMID:18984161) (PMID:12067652)
UniProt ComplexPortal
PMID:12067652 PMID:16434402 PMID:18984161
NCBI chrNW_004955519:4,205,660...4,228,174
Ensembl chrNW_004955519:4,205,651...4,228,059
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Prmt5
protein arginine methyltransferase 5
involved_in
ISO
(PMID:17709427)
UniProt
PMID:17709427
NCBI chrNW_004955409:37,369,507...37,378,034
Ensembl chrNW_004955409:37,369,234...37,378,093
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Prmt7
protein arginine methyltransferase 7
involved_in
ISO
(PMID:17709427)
UniProt
PMID:17709427
NCBI chrNW_004955484:8,299,427...8,352,465
Ensembl chrNW_004955484:8,299,427...8,340,287
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Prp4k
pre-mRNA processing factor kinase PRP4K
involved_in
ISO
(PMID:12077342)
UniProt
PMID:12077342
NCBI chrNW_004955465:9,359,634...9,392,913
Ensembl chrNW_004955465:9,359,634...9,392,913
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Sart3
spliceosome associated factor 3, U4/U6 recycling protein
involved_in NOT|involved_in
ISO
(PMID:14749385), (PMID:15314151) (PMID:15314151)
UniProt
PMID:14749385 PMID:15314151
NCBI chrNW_004955455:9,802,260...9,833,326
Ensembl chrNW_004955455:9,802,260...9,832,957
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Snrpb
small nuclear ribonucleoprotein polypeptides B and B1
involved_in
ISO
(PMID:18984161)
UniProt
PMID:18984161
NCBI chrNW_004955415:13,522,638...13,530,725
Ensembl chrNW_004955415:13,520,530...13,531,466
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Snrpc
small nuclear ribonucleoprotein polypeptide C
involved_in
ISO
(PMID:8972845)
UniProt
PMID:8972845
NCBI chrNW_004955437:2,770,251...2,830,871
Ensembl chrNW_004955437:2,813,296...2,831,036
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Snrpd1
small nuclear ribonucleoprotein D1 polypeptide
involved_in
ISO
(PMID:18984161)
UniProt
PMID:18984161
NCBI chrNW_004955402:10,283,970...10,294,869
Ensembl chrNW_004955402:10,283,970...10,296,495
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Snrpd2
small nuclear ribonucleoprotein D2 polypeptide
involved_in
ISO
(PMID:18984161)
UniProt
PMID:18984161
NCBI chrNW_004955574:157,769...164,947
Ensembl chrNW_004955574:157,769...164,947
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Snrpd3
small nuclear ribonucleoprotein D3 polypeptide
involved_in
ISO
(PMID:18984161)
UniProt
PMID:18984161
NCBI chrNW_004955455:8,021,946...8,045,325
Ensembl chrNW_004955455:8,021,946...8,046,439
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Snrpe
small nuclear ribonucleoprotein polypeptide E
involved_in
ISO
(PMID:18984161)
UniProt
PMID:18984161
NCBI chrNW_004955406:39,725,841...39,732,527
Ensembl chrNW_004955406:39,725,446...39,734,586
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Snrpf
small nuclear ribonucleoprotein polypeptide F
involved_in
ISO
(PMID:18984161)
UniProt
PMID:18984161
NCBI chrNW_004955405:32,236,876...32,242,716
Ensembl chrNW_004955405:32,236,876...32,242,716
G
Snrpg
small nuclear ribonucleoprotein polypeptide G
involved_in
ISO
(PMID:18984161)
UniProt
PMID:18984161
NCBI chrNW_004955424:14,844,318...14,851,720
Ensembl chrNW_004955424:14,844,318...14,851,720
G
Strap
serine/threonine kinase receptor associated protein
involved_in
ISO
(PMID:18984161) (PMID:12067652)
UniProt ComplexPortal
PMID:12067652 PMID:18984161
NCBI chrNW_004955413:12,533,422...12,558,138
Ensembl chrNW_004955413:12,533,423...12,559,288
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Tdrd6
tudor domain containing 6
involved_in
ISO
(MGI:5904379|PMID:28263986)
CACAO
PMID:28263986
MGI:5904379
NCBI chrNW_004955437:11,517,094...11,531,816
Ensembl chrNW_004955437:11,517,930...11,531,869
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Tssc4
tumor suppressing subtransferable candidate 4
involved_in
ISO
(PMID:35188580)
UniProt
PMID:35188580
NCBI chrNW_004955422:14,175,271...14,178,991
Ensembl chrNW_004955422:14,175,271...14,178,991
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Lsm2
LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
acts_upstream_of_or_within
ISO
(PMID:10523320)
MGI
PMID:10523320
NCBI chrNW_004955437:321,367...325,556
Ensembl chrNW_004955437:320,768...325,810
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Prp4k
pre-mRNA processing factor kinase PRP4K
involved_in
ISO
(PMID:20118938)
UniProt
PMID:20118938
NCBI chrNW_004955465:9,359,634...9,392,913
Ensembl chrNW_004955465:9,359,634...9,392,913
G
Prpf19
pre-mRNA processing factor 19
involved_in
ISO
(PMID:20595234)
UniProt
PMID:20595234
NCBI chrNW_004955511:5,546,212...5,552,368
Ensembl chrNW_004955511:5,545,989...5,557,792
G
Prpf3
pre-mRNA processing factor 3
involved_in
ISO
(PMID:20595234)
UniProt
PMID:20595234
NCBI chrNW_004955413:429,259...455,449
Ensembl chrNW_004955413:429,259...455,463
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Prpf31
pre-mRNA processing factor 31
involved_in acts_upstream_of_or_within
ISO
(PMID:15257298) (PMID:20118938) (PMID:11867543)
BHF-UCL UniProt MGI
PMID:11867543 PMID:15257298 PMID:20118938
NCBI chrNW_004955604:125,489...136,209
Ensembl chrNW_004955604:124,686...136,901
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Prpf8
pre-mRNA processing factor 8
involved_in
ISO
(PMID:20595234)
UniProt
PMID:20595234
NCBI chrNW_004955481:1,499,634...1,530,670
Ensembl chrNW_004955481:1,499,634...1,530,670
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Sart3
spliceosome associated factor 3, U4/U6 recycling protein
involved_in
ISO
(PMID:12032085), (PMID:20595234)
UniProt
PMID:12032085 PMID:20595234
NCBI chrNW_004955455:9,802,260...9,833,326
Ensembl chrNW_004955455:9,802,260...9,832,957
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Tssc4
tumor suppressing subtransferable candidate 4
involved_in
ISO
(PMID:34131137)
UniProt
PMID:34131137
NCBI chrNW_004955422:14,175,271...14,178,991
Ensembl chrNW_004955422:14,175,271...14,178,991
G
Usp4
ubiquitin specific peptidase 4
involved_in
ISO
(PMID:20595234)
UniProt
PMID:20595234
NCBI chrNW_004955532:1,247,110...1,284,564
Ensembl chrNW_004955532:1,247,110...1,285,121
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Snrnp200
small nuclear ribonucleoprotein U5 subunit 200
involved_in
ISO
(PMID:35241646)
UniProt
PMID:35241646
NCBI chrNW_004955470:3,828,943...3,856,059
Ensembl chrNW_004955470:3,828,943...3,856,236
G
Ddx42
DEAD-box helicase 42
involved_in
ISO
(PMID:36797247)
UniProt
PMID:36797247
NCBI chrNW_004955478:8,009,155...8,052,990
Ensembl chrNW_004955478:8,010,056...8,041,449
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Ddx46
DEAD-box helicase 46
involved_in
ISO
(PMID:36797247)
UniProt
PMID:36797247
NCBI chrNW_004955408:29,981,509...30,031,473
Ensembl chrNW_004955408:29,981,229...30,031,473
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Htatsf1
HIV-1 Tat specific factor 1
involved_in
ISO
(PMID:32494006), (PMID:34822310)
UniProt
PMID:32494006 PMID:34822310
NCBI chrNW_004955489:8,607,649...8,622,044
Ensembl chrNW_004955489:8,607,629...8,622,044
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Sf3a1
splicing factor 3a subunit 1
involved_in
ISO
(PMID:10882114), (PMID:11533230)
UniProt
PMID:10882114 PMID:11533230
NCBI chrNW_004955455:4,579,153...4,601,942
Ensembl chrNW_004955455:4,577,329...4,602,141
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Sf3a2
splicing factor 3a subunit 2
involved_in
ISO
(PMID:11533230)
UniProt
PMID:11533230
NCBI chrNW_004955495:5,896,648...5,904,287
Ensembl chrNW_004955495:5,896,648...5,904,056
G
Sf3a3
splicing factor 3a subunit 3
involved_in
ISO
(PMID:11533230)
UniProt
PMID:11533230
NCBI chrNW_004955452:15,691,729...15,715,782
Ensembl chrNW_004955452:15,691,497...15,716,524
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all