RGD DISEASE ONTOLOGY - ANNOTATIONS
RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term: distal arthrogryposis type 1A
Accession: DOID:0111597
browse the term
Definition: A distal arthrogryposis type 1 that has_material_basis_in heterozygous mutation in the TPM2 gene on chromosome 9p13.3. (DO)
Synonyms: exact_synonym: DA1A
primary_id: OMIM:108120
GViewer not supported for the selected species.
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Aptx
aprataxin
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:2,645,716...2,664,394
Ensembl chrNW_004955472:2,652,869...2,664,272
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Aqp3
aquaporin 3 (Gill blood group)
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:2,234,770...2,239,753
Ensembl chrNW_004955472:2,234,770...2,240,027
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Aqp7
aquaporin 7
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:2,283,426...2,297,251
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Arhgef39
Rho guanine nucleotide exchange factor 39
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:633,474...636,440
Ensembl chrNW_004955472:633,405...640,305
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Arid3c
AT-rich interaction domain 3C
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:1,503,448...1,510,965
Ensembl chrNW_004955472:1,504,032...1,510,590
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Atosb
atos homolog B
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:1,066,661...1,077,960
Ensembl chrNW_004955472:1,071,615...1,077,960
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B4galt1
beta-1,4-galactosyltransferase 1
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:2,490,649...2,536,053
Ensembl chrNW_004955472:2,490,661...2,536,317
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Bag1
BAG cochaperone 1
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:2,394,317...2,405,199
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Ca9
carbonic anhydrase 9
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:619,084...625,570
Ensembl chrNW_004955472:619,245...625,051
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Ccdc107
coiled-coil domain containing 107
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:636,633...640,198
Ensembl chrNW_004955472:633,405...640,175
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Ccin
calicin
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004958151:6...1,111
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Ccl19
C-C motif chemokine ligand 19
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:1,444,598...1,446,488
Ensembl chrNW_004955472:1,444,316...1,446,490
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Ccl21
C-C motif chemokine ligand 21
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:1,427,660...1,428,771
Ensembl chrNW_004955472:1,427,710...1,429,102
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Ccl27
C-C motif chemokine ligand 27
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:1,470,407...1,474,800
Ensembl chrNW_004955472:1,471,551...1,474,777
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Cd72
CD72 molecule
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:663,451...670,890
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Cimip2b
ciliary microtubule inner protein 2B
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:695,955...698,086
Ensembl chrNW_004955472:696,157...697,922
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Clta
clathrin light chain A
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:96,958...117,230
Ensembl chrNW_004955472:97,235...117,144
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Cntfr
ciliary neurotrophic factor receptor
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:1,540,973...1,577,734
Ensembl chrNW_004955472:1,540,973...1,579,947
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Cntnap1
contactin associated protein 1
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:25326635 PMID:25741868 PMID:28374019 PMID:32214227
NCBI chrNW_004955451:16,535,924...16,547,800
Ensembl chrNW_004955451:16,536,416...16,547,213
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Creb3
cAMP responsive element binding protein 3
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:564,227...568,708
Ensembl chrNW_004955472:564,493...568,491
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Dcaf12
DDB1 and CUL4 associated factor 12
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:1,943,477...1,974,938
Ensembl chrNW_004955472:1,943,477...1,974,938
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Dctn3
dynactin subunit 3
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:1,511,984...1,521,148
Ensembl chrNW_004955472:1,511,937...1,521,494
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Dnai1
dynein axonemal intermediate chain 1
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:1,599,265...1,668,214
Ensembl chrNW_004955472:1,599,493...1,668,024
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Dnaja1
DnaJ heat shock protein family (Hsp40) member A1
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:2,604,002...2,618,033
Ensembl chrNW_004955472:2,604,002...2,618,033
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Dnajb5
DnaJ heat shock protein family (Hsp40) member B5
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:1,168,568...1,177,849
Ensembl chrNW_004955472:1,167,160...1,178,726
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Enho
energy homeostasis associated
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:1,597,488...1,599,274
Ensembl chrNW_004955472:1,503,498...1,599,274
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Exosc3
exosome component 3
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955419:28,683,896...28,692,006
Ensembl chrNW_004955419:28,683,896...28,693,395
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Fam219a
family with sequence similarity 219 member A
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:1,668,400...1,718,194
Ensembl chrNW_004955472:1,668,431...1,718,187
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Fam221b
family with sequence similarity 221 member B
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:489,530...497,224
Ensembl chrNW_004955472:491,251...497,186
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Fancg
FA complementation group G
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:1,097,986...1,105,836
Ensembl chrNW_004955472:1,098,839...1,104,911
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Fbxo10
F-box protein 10
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955419:28,915,083...28,969,374
Ensembl chrNW_004955419:28,897,288...28,969,374
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Frmpd1
FERM and PDZ domain containing 1
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955419:28,717,277...28,888,486
Ensembl chrNW_004955419:28,716,494...28,888,495
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Galt
galactose-1-phosphate uridylyltransferase
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:1,487,173...1,490,548
Ensembl chrNW_004955472:1,487,173...1,490,986
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Gba2
glucosylceramidase beta 2
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:553,556...564,411
Ensembl chrNW_004955472:553,556...564,411
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Glipr2
GLI pathogenesis related 2
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:191,886...201,551
Ensembl chrNW_004955472:189,858...201,549
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Gne
glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:56,623...92,553
Ensembl chrNW_004955472:45,926...97,082
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Grhpr
glyoxylate and hydroxypyruvate reductase
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955419:29,032,591...29,044,046
Ensembl chrNW_004955419:29,032,600...29,044,257
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Hint2
histidine triad nucleotide binding protein 2
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:500,845...503,067
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Il11ra
interleukin 11 receptor subunit alpha
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:1,474,802...1,485,352
Ensembl chrNW_004955472:1,475,178...1,482,206
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Kif24
kinesin family member 24
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:1,774,850...1,868,525
Ensembl chrNW_004955472:1,792,520...1,860,056
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LOC102003853
myosin-3
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:25741868
NCBI chrNW_004955467:6,561,609...6,583,228
Ensembl chrNW_004955467:6,561,617...6,583,089
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LOC102009376
olfactory receptor 13J1
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:452,846...454,056
Ensembl chrNW_004955472:452,944...453,879
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Melk
maternal embryonic leucine zipper kinase
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955419:29,718,291...29,815,163
Ensembl chrNW_004955419:29,717,978...29,815,170
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Met
MET proto-oncogene, receptor tyrosine kinase
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:30777867
NCBI chrNW_004955432:22,440,671...22,519,592
Ensembl chrNW_004955432:22,440,637...22,517,647
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Msmp
microseminoprotein, prostate associated
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:549,115...550,247
Ensembl chrNW_004955472:549,115...550,247
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Myorg
myogenesis regulating glycosidase (putative)
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:1,735,292...1,740,304
Ensembl chrNW_004955472:1,735,292...1,740,304
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Ndufb6
NADH:ubiquinone oxidoreductase subunit B6
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:3,054,026...3,064,530
Ensembl chrNW_004955472:3,054,154...3,064,433
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Nfx1
nuclear transcription factor, X-box binding 1
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:2,306,961...2,371,597
Ensembl chrNW_004955472:2,307,682...2,371,433
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Nol6
nucleolar protein 6
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:2,210,490...2,225,275
Ensembl chrNW_004955472:2,211,079...2,224,259
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Npr2
natriuretic peptide receptor 2
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:506,351...523,647
Ensembl chrNW_004955472:506,351...523,316
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Nudt2
nudix hydrolase 2
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:1,760,046...1,774,539
Ensembl chrNW_004955472:1,759,900...1,774,539
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Pax5
paired box 5
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955419:29,395,631...29,577,272
Ensembl chrNW_004955419:29,395,389...29,570,952
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Phf24
PHD finger protein 24
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:1,186,021...1,204,018
Ensembl chrNW_004955472:1,185,110...1,204,040
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Pigo
phosphatidylinositol glycan anchor biosynthesis class O
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:1,084,932...1,094,243
Ensembl chrNW_004955472:1,084,932...1,094,243
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Polr1e
RNA polymerase I subunit E
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955419:28,970,982...28,983,862
Ensembl chrNW_004955419:28,967,083...28,983,862
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Reck
reversion inducing cysteine rich protein with kazal motifs
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:222,261...276,869
Ensembl chrNW_004955472:223,683...287,089
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Rgp1
RGP1 homolog, RAB6A GEF complex partner 1
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:550,198...554,038
Ensembl chrNW_004955472:550,198...554,038
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Rigi
RNA sensor RIG-I
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:3,093,895...3,135,524
Ensembl chrNW_004955472:3,093,939...3,133,987
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Rnf38
ring finger protein 38
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955419:29,903,917...30,063,705
Ensembl chrNW_004955419:29,993,358...30,063,705
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Rpp25l
ribonuclease P/MRP subunit p25 like
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:1,521,651...1,522,599
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Rusc2
RUN and SH3 domain containing 2
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:698,021...742,966
Ensembl chrNW_004955472:698,513...741,758
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Sigmar1
sigma non-opioid intracellular receptor 1
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:1,493,896...1,496,377
Ensembl chrNW_004955472:1,493,896...1,496,377
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Sit1
signaling threshold regulating transmembrane adaptor 1
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:643,923...645,802
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Smu1
SMU1 DNA replication regulator and spliceosomal factor
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:2,570,248...2,600,551
Ensembl chrNW_004955472:2,570,340...2,600,146
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Spag8
sperm associated antigen 8
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:503,286...506,261
Ensembl chrNW_004955472:504,087...505,835
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Spata31g1
SPATA31 subfamily G member 1
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004958072:16...1,146
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Spink4
serine peptidase inhibitor Kazal type 4
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:2,406,279...2,415,668
Ensembl chrNW_004955472:2,406,279...2,415,668
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Spmip6
sperm microtubule inner protein 6
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:1,718,474...1,733,980
Ensembl chrNW_004955472:1,718,517...1,735,004
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Stoml2
stomatin like 2
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:1,079,261...1,082,632
Ensembl chrNW_004955472:1,079,578...1,082,486
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Tesk1
testis associated actin remodelling kinase 1
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:670,847...676,060
Ensembl chrNW_004955472:668,352...699,620
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Tln1
talin 1
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:568,939...603,676
Ensembl chrNW_004955472:568,939...603,676
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Tmem215
transmembrane protein 215
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:2,875,398...2,879,115
Ensembl chrNW_004955472:2,875,398...2,879,115
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Tmem8b
transmembrane protein 8B
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:467,027...489,287
Ensembl chrNW_004955472:467,492...488,892
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Tomm5
translocase of outer mitochondrial membrane 5
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955419:28,897,328...28,900,289
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Topors
TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:3,073,090...3,076,607
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Tpm2
tropomyosin 2
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
OMIM ClinVar
PMID:7977374 PMID:9536098 PMID:11738357 PMID:12592607 PMID:16199547 PMID:17194691 PMID:17339586 PMID:17576681 PMID:17846275 PMID:18414213 PMID:18420702 PMID:18422639 PMID:18789687 PMID:19047562 PMID:19155175 PMID:20301436 PMID:22084935 PMID:22749895 PMID:22832343 PMID:22980765 PMID:23401156 PMID:23678273 PMID:23689010 PMID:23757202 PMID:23886664 PMID:24033266 PMID:24039757 PMID:24214167 PMID:24657080 PMID:24692096 PMID:25741868 PMID:25978979 PMID:26467025 PMID:26708479 PMID:26752647 PMID:27726070 PMID:27854218 PMID:28492532 PMID:29068549 PMID:30545627 PMID:31966463 PMID:32092148 PMID:33060286 More...
NCBI chrNW_004955472:611,079...617,823
Ensembl chrNW_004955472:611,028...617,821
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Trmt10b
tRNA methyltransferase 10B
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955419:28,693,509...28,720,006
Ensembl chrNW_004955419:28,693,821...28,713,349
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Ubap1
ubiquitin associated protein 1
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:1,860,476...1,903,478
Ensembl chrNW_004955472:1,860,476...1,903,478
G
Ubap2
ubiquitin associated protein 2
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:2,044,397...2,100,904
Ensembl chrNW_004955472:2,020,232...2,100,155
G
Vcp
valosin containing protein
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955472:1,111,649...1,124,076
Ensembl chrNW_004955472:1,107,164...1,124,076
G
Zbtb5
zinc finger and BTB domain containing 5
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955419:29,000,070...29,032,446
Ensembl chrNW_004955419:29,001,265...29,032,446
G
Zcchc7
zinc finger CCHC-type containing 7
ISO
ClinVar Annotator: match by term: Arthrogryposis, distal, type 1A
ClinVar
PMID:28492532
NCBI chrNW_004955419:29,108,905...29,339,602
Ensembl chrNW_004955419:29,108,644...29,334,670
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all