Atl1 Variant Search Result - Rat Genome Database

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625 records found for search term Atl1

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RGD ID	Symbol	Variant Type	Name	Trait	Clinical Significance	Chr	Start	Stop	Species	Annotations	Match
8568446	CV39538	deletion	ATL1, 1-BP DEL, 976G	Hereditary sensory neuropathy type 1D [RCV000023544]\|NEUROPATHY, HEREDITARY SENSORY, TYPE ID [RCV000023544]	pathogenic				Human		name
8558038	CV19389	insertion	ATL1, 1-BP INS, 1688A	Hereditary spastic paraplegia 3A [RCV000004598]	pathogenic				Human		name
401829271	CV2743716	single nucleotide variant	NM_015915.5(ATL1):c.*87C>G	not provided [RCV003326892]	likely benign	14	50632426	50632426	Human		name
126737673	CV1011124	single nucleotide variant	NM_015915.5(ATL1):c.35-3C>T	Hereditary spastic paraplegia 3A [RCV001314012]	uncertain significance	14	50587828	50587828	Human	1	name
155915603	CV2063132	single nucleotide variant	NM_015915.5(ATL1):c.34+3G>C	Hereditary spastic paraplegia 3A [RCV002838036]	uncertain significance	14	50560302	50560302	Human	1	name
156164296	CV2159150	single nucleotide variant	NM_015915.5(ATL1):c.35-8T>C	Hereditary spastic paraplegia 3A [RCV003023308]	likely benign	14	50587823	50587823	Human	1	name
402465092	CV2854958	single nucleotide variant	NM_015915.5(ATL1):c.35-1G>A	Hereditary spastic paraplegia 3A [RCV003502917]	likely pathogenic	14	50587830	50587830	Human	1	name
405070460	CV3065114	single nucleotide variant	NM_015915.5(ATL1):c.34+6T>G	Hereditary spastic paraplegia 3A [RCV003612144]	uncertain significance	14	50560305	50560305	Human	1	name
11601831	CV320671	single nucleotide variant	NM_015915.5(ATL1):c.*305T>C	Hereditary spastic paraplegia 3A [RCV000285544]\|Neuropathy, hereditary sensory, type 1D [RCV002259851]\|not provided [RCV001574920]	benign\|likely benign	14	50632644	50632644	Human	2	name
11661787	CV329487	single nucleotide variant	NM_015915.5(ATL1):c.*304C>T	Hereditary spastic paraplegia 3A [RCV000380046]	uncertain significance	14	50632643	50632643	Human	1	name
11626112	CV329489	single nucleotide variant	NM_015915.5(ATL1):c.*450A>G	Hereditary spastic paraplegia 3A [RCV000406965]	benign\|likely benign	14	50632789	50632789	Human	1	name
11625828	CV329491	single nucleotide variant	NM_015915.5(ATL1):c.*621G>A	Hereditary spastic paraplegia 3A [RCV000403138]	benign\|likely benign	14	50632960	50632960	Human	1	name
11620641	CV336054	single nucleotide variant	NM_015915.5(ATL1):c.*212T>A	Hereditary spastic paraplegia 3A [RCV000339497]	benign\|likely benign	14	50632551	50632551	Human	1	name
11621175	CV336055	single nucleotide variant	NM_015915.5(ATL1):c.*392C>A	Hereditary spastic paraplegia 3A [RCV000345218]	benign\|likely benign	14	50632731	50632731	Human	1	name
11658082	CV336058	single nucleotide variant	NM_015915.5(ATL1):c.*528A>C	Hereditary spastic paraplegia 3A [RCV000345997]	uncertain significance	14	50632867	50632867	Human	1	name
11653480	CV336059	single nucleotide variant	NM_015915.5(ATL1):c.*653T>C	Hereditary spastic paraplegia 3A [RCV000311056]	uncertain significance	14	50632992	50632992	Human	1	name
11618002	CV337996	single nucleotide variant	NM_015915.5(ATL1):c.*475G>A	Hereditary spastic paraplegia 3A [RCV000309749]	benign\|likely benign	14	50632814	50632814	Human	1	name
28870821	CV871914	single nucleotide variant	NM_015915.5(ATL1):c.*109A>C	Hereditary spastic paraplegia 3A [RCV001113749]	uncertain significance	14	50632448	50632448	Human	1	name
28870824	CV871915	single nucleotide variant	NM_015915.5(ATL1):c.*180A>C	Hereditary spastic paraplegia 3A [RCV001113750]	uncertain significance	14	50632519	50632519	Human	1	name
28910979	CV871916	single nucleotide variant	NM_015915.5(ATL1):c.*327A>G	Hereditary spastic paraplegia 3A [RCV001109729]	uncertain significance	14	50632666	50632666	Human	1	name
28910980	CV871917	single nucleotide variant	NM_015915.5(ATL1):c.*335C>T	Hereditary spastic paraplegia 3A [RCV001109730]	uncertain significance	14	50632674	50632674	Human	1	name
28910981	CV871918	single nucleotide variant	NM_015915.5(ATL1):c.*371T>A	Hereditary spastic paraplegia 3A [RCV001109731]	uncertain significance	14	50632710	50632710	Human	1	name
28910982	CV871919	single nucleotide variant	NM_015915.5(ATL1):c.*464C>T	Hereditary spastic paraplegia 3A [RCV001109732]	uncertain significance	14	50632803	50632803	Human	1	name
38490788	CV960804	single nucleotide variant	NM_015915.5(ATL1):c.34+4A>G	Hereditary spastic paraplegia 3A [RCV001239043]	uncertain significance	14	50560303	50560303	Human	1	name
127306094	CV1144629	single nucleotide variant	NM_015915.5(ATL1):c.631-7T>G	Hereditary spastic paraplegia 3A [RCV001500101]	likely benign	14	50613252	50613252	Human	1	name
150462864	CV1253723	single nucleotide variant	NM_015915.5(ATL1):c.35-74G>C	not provided [RCV001669765]	benign	14	50587757	50587757	Human		name
8690181	CV140131	single nucleotide variant	NM_015915.5(ATL1):c.630+7G>A	ATL1-related disorder [RCV003982898]\|Hereditary spastic paraplegia 3A [RCV000860437]\|Neuropathy, hereditary sensory, type 1D [RCV002259650]\|not provided [RCV004715707]\|not specified [RCV000123709]	benign	14	50595639	50595639	Human	2	name , trait , alternate_id
152050201	CV1527734	single nucleotide variant	NM_015915.5(ATL1):c.35-20G>T	Hereditary spastic paraplegia 3A [RCV002089058]	likely benign	14	50587811	50587811	Human	1	name
152047883	CV1569592	deletion	NM_015915.5(ATL1):c.991-3del	Hereditary spastic paraplegia 3A [RCV002126864]	benign	14	50621832	50621832	Human	1	name
152045161	CV1588735	single nucleotide variant	NM_015915.5(ATL1):c.34+10A>G	Hereditary spastic paraplegia 3A [RCV002188750]	likely benign	14	50560309	50560309	Human	1	name
152062235	CV1594462	single nucleotide variant	NM_015915.5(ATL1):c.35-10T>C	Hereditary spastic paraplegia 3A [RCV002110252]	likely benign	14	50587821	50587821	Human	1	name
152031649	CV1629208	single nucleotide variant	NM_015915.5(ATL1):c.35-11C>A	Hereditary spastic paraplegia 3A [RCV002106208]	likely benign	14	50587820	50587820	Human	1	name
155746952	CV1800429	single nucleotide variant	NM_015915.5(ATL1):c.574-3T>C	Inborn genetic diseases [RCV002347801]	uncertain significance	14	50595573	50595573	Human	1	name
155746964	CV1800439	single nucleotide variant	NM_015915.5(ATL1):c.574-6T>C	Hereditary spastic paraplegia 3A [RCV003103225]\|Inborn genetic diseases [RCV002347811]	likely benign	14	50595570	50595570	Human	2	name
156162902	CV1903164	single nucleotide variant	NM_015915.5(ATL1):c.35-15T>C	Hereditary spastic paraplegia 3A [RCV003082966]	likely benign	14	50587816	50587816	Human	1	name
10053064	CV195727	single nucleotide variant	NM_015915.5(ATL1):c.631-7T>A	ATL1-related disorder [RCV003947533]\|Hereditary spastic paraplegia 3A [RCV001081633]\|not provided [RCV000724713]	benign\|likely benign\|conflicting interpretations of pathogenicity\|uncertain significance	14	50613252	50613252	Human	1	name , trait , alternate_id
156402792	CV2010119	single nucleotide variant	NM_015915.5(ATL1):c.34+16G>C	Hereditary spastic paraplegia 3A [RCV002726156]	likely benign	14	50560315	50560315	Human	1	name
156175439	CV2038179	single nucleotide variant	NM_015915.5(ATL1):c.630+9G>A	Hereditary spastic paraplegia 3A [RCV002741995]	likely benign	14	50595641	50595641	Human	1	name
156086184	CV2080054	single nucleotide variant	NM_015915.5(ATL1):c.522+5G>A	Hereditary spastic paraplegia 3A [RCV002847553]	uncertain significance	14	50591644	50591644	Human	1	name
156183464	CV2102560	deletion	NM_015915.5(ATL1):c.574-5del	Hereditary spastic paraplegia 3A [RCV002917219]	benign	14	50595564	50595564	Human	1	name
156176209	CV2144779	single nucleotide variant	NM_015915.5(ATL1):c.990+9C>G	Hereditary spastic paraplegia 3A [RCV003005558]	likely benign	14	50620735	50620735	Human	1	name
243064098	CV2410875	single nucleotide variant	NM_015915.5(ATL1):c.417+1G>T	not provided [RCV003142714]	likely pathogenic	14	50591076	50591076	Human		name
401859349	CV2794311	single nucleotide variant	NM_015915.5(ATL1):c.522+1G>T	Hereditary spastic paraplegia 3A [RCV003384313]	likely pathogenic	14	50591640	50591640	Human	1	name
401902005	CV2810412	single nucleotide variant	NM_015915.5(ATL1):c.417+4T>A	not provided [RCV003393423]	likely benign	14	50591079	50591079	Human		name
401902007	CV2810414	single nucleotide variant	NM_015915.5(ATL1):c.630+6C>T	not provided [RCV003393425]	uncertain significance	14	50595638	50595638	Human		name
405066765	CV2959986	single nucleotide variant	NM_015915.5(ATL1):c.35-16C>T	Hereditary spastic paraplegia 3A [RCV003611862]	likely benign	14	50587815	50587815	Human	1	name
405051146	CV3081656	single nucleotide variant	NM_015915.5(ATL1):c.418-8G>T	not provided [RCV003740616]	likely benign	14	50591527	50591527	Human		name
405201621	CV3128935	single nucleotide variant	NM_015915.5(ATL1):c.34+16G>T	Hereditary spastic paraplegia 3A [RCV003821978]	likely benign	14	50560315	50560315	Human	1	name
405154966	CV3159338	single nucleotide variant	NM_015915.5(ATL1):c.724-9T>G	Hereditary spastic paraplegia 3A [RCV003856603]	uncertain significance	14	50614364	50614364	Human	1	name
11611230	CV320649	single nucleotide variant	NM_015915.5(ATL1):c.417+3A>G	Hereditary spastic paraplegia 3A [RCV000558085]\|Hereditary spastic paraplegia 3A [RCV002487388]\|Hereditary spastic paraplegia [RCV001848110]\|Neuropathy, hereditary sensory, type 1D [RCV002259846]\|not provided [RCV001690040]	benign\|likely benign	14	50591078	50591078	Human	3	name
11624600	CV329483	single nucleotide variant	NM_015915.5(ATL1):c.991-6T>G	Hereditary spastic paraplegia 3A [RCV000388283]\|Hereditary spastic paraplegia [RCV001848113]\|Inborn genetic diseases [RCV002379192]\|Neuropathy, hereditary sensory, type 1D [RCV002259850]	benign\|likely benign	14	50621837	50621837	Human	4	name
11653075	CV336042	single nucleotide variant	NM_015915.5(ATL1):c.630+6C>A	Hereditary spastic paraplegia 3A [RCV000308265]	uncertain significance	14	50595638	50595638	Human	1	name
597895253	CV3744149	single nucleotide variant	NM_015915.5(ATL1):c.283-8T>C	Hereditary spastic paraplegia 3A [RCV005071619]	likely benign	14	50590933	50590933	Human	1	name
597848651	CV3792987	single nucleotide variant	NM_015915.5(ATL1):c.863-3T>C	Hereditary spastic paraplegia 3A [RCV005145123]	uncertain significance	14	50620596	50620596	Human	1	name
597970187	CV3822001	single nucleotide variant	NM_015915.5(ATL1):c.862+3T>G	Hereditary spastic paraplegia 3A [RCV005166464]	uncertain significance	14	50614514	50614514	Human	1	name
597900599	CV3855078	single nucleotide variant	NM_015915.5(ATL1):c.862+4T>G	Hereditary spastic paraplegia 3A [RCV005201986]	uncertain significance	14	50614515	50614515	Human	1	name
12885124	CV399673	single nucleotide variant	NM_015915.5(ATL1):c.990+4T>A	Hereditary spastic paraplegia 3A [RCV000464748]\|Inborn genetic diseases [RCV002379471]\|not specified [RCV000518566]	likely benign\|uncertain significance	14	50620730	50620730	Human	2	name
12902392	CV409128	duplication	NM_015915.5(ATL1):c.991-3dup	Hereditary spastic paraplegia 3A [RCV002063791]\|Inborn genetic diseases [RCV002383923]\|Neuropathy, hereditary sensory, type 1D [RCV002259965]\|not provided [RCV004719084]	benign\|likely benign	14	50621831	50621832	Human	3	name
13480819	CV464292	single nucleotide variant	NM_015915.5(ATL1):c.630+3G>A	Hereditary spastic paraplegia 3A [RCV000551150]\|Inborn genetic diseases [RCV002358562]	uncertain significance	14	50595635	50595635	Human	2	name
13538391	CV504793	single nucleotide variant	NM_015915.5(ATL1):c.34+16G>A	Hereditary spastic paraplegia 3A [RCV003767662]\|not specified [RCV000611772]	likely benign	14	50560315	50560315	Human	1	name
13538083	CV504799	single nucleotide variant	NM_015915.5(ATL1):c.35-14G>A	Hereditary spastic paraplegia 3A [RCV002064372]\|Neuropathy, hereditary sensory, type 1D [RCV002260029]\|not provided [RCV003736857]\|not specified [RCV000611316]	benign	14	50587817	50587817	Human	2	name
126726967	CV995862	single nucleotide variant	NM_015915.5(ATL1):c.282+4T>C	Hereditary spastic paraplegia 3A [RCV001303043]	uncertain significance	14	50588082	50588082	Human	1	name
127275457	CV1102327	single nucleotide variant	NM_015915.5(ATL1):c.522+10A>G	Hereditary spastic paraplegia 3A [RCV001443332]	likely benign	14	50591649	50591649	Human	1	name
150334139	CV1164460	single nucleotide variant	NM_015915.5(ATL1):c.418-19G>T	Hereditary spastic paraplegia 3A [RCV002070360]\|Neuropathy, hereditary sensory, type 1D [RCV001553935]\|not provided [RCV001692448]\|not specified [RCV001529324]	benign	14	50591516	50591516	Human	2	name
150409068	CV1177785	single nucleotide variant	NM_015915.5(ATL1):c.574-24G>C	not provided [RCV001546118]	likely benign	14	50595552	50595552	Human		name
150420515	CV1181171	deletion	NM_015915.5(ATL1):c.34+109del	not provided [RCV001551582]	likely benign	14	50560408	50560408	Human		name
150418733	CV1194841	single nucleotide variant	NM_015915.5(ATL1):c.283-56G>A	not provided [RCV001569355]	likely benign	14	50590885	50590885	Human		name
150468804	CV1257105	single nucleotide variant	NM_015915.5(ATL1):c.34+110G>C	not provided [RCV001670751]	benign	14	50560409	50560409	Human		name
151667843	CV1462783	single nucleotide variant	NM_015915.5(ATL1):c.522+19T>C	Hereditary spastic paraplegia 3A [RCV001991533]	likely benign	14	50591658	50591658	Human	1	name
151715627	CV1482394	duplication	NM_015915.5(ATL1):c.1566+2dup	Hereditary spastic paraplegia 3A [RCV002020919]	uncertain significance	14	50630010	50630011	Human	1	name
152141247	CV1520581	single nucleotide variant	NM_015915.5(ATL1):c.1119+7G>A	Hereditary spastic paraplegia 3A [RCV002178086]	likely benign	14	50623255	50623255	Human	1	name
152103472	CV1569493	single nucleotide variant	NM_015915.5(ATL1):c.991-12C>G	Hereditary spastic paraplegia 3A [RCV002115649]	likely benign	14	50621831	50621831	Human	1	name
152107232	CV1581850	single nucleotide variant	NM_015915.5(ATL1):c.630+20T>C	Hereditary spastic paraplegia 3A [RCV002079771]	likely benign	14	50595652	50595652	Human	1	name
152107021	CV1609736	duplication	NM_015915.5(ATL1):c.991-13dup	Hereditary spastic paraplegia 3A [RCV002116055]	benign	14	50621825	50621826	Human	1	name
152140048	CV1613784	single nucleotide variant	NM_015915.5(ATL1):c.522+15C>T	Hereditary spastic paraplegia 3A [RCV002084037]	likely benign	14	50591654	50591654	Human	1	name
152036353	CV1617557	single nucleotide variant	NM_015915.5(ATL1):c.282+15C>G	Hereditary spastic paraplegia 3A [RCV002125392]	likely benign	14	50588093	50588093	Human	1	name
152038635	CV1644261	single nucleotide variant	NM_015915.5(ATL1):c.522+19T>G	Hereditary spastic paraplegia 3A [RCV002165353]	likely benign	14	50591658	50591658	Human	1	name
156270931	CV1870725	duplication	NM_015915.5(ATL1):c.573+24dup	Hereditary spastic paraplegia 3A [RCV003060714]	benign	14	50593914	50593915	Human	1	name
156408963	CV1880005	single nucleotide variant	NM_015915.5(ATL1):c.283-16C>G	Hereditary spastic paraplegia 3A [RCV003071477]	likely benign	14	50590925	50590925	Human	1	name
156011075	CV1880438	single nucleotide variant	NM_015915.5(ATL1):c.991-19T>A	Hereditary spastic paraplegia 3A [RCV003077092]	likely benign	14	50621824	50621824	Human	1	name
156350274	CV1886122	single nucleotide variant	NM_015915.5(ATL1):c.418-19G>A	Hereditary spastic paraplegia 3A [RCV003090920]	likely benign	14	50591516	50591516	Human	1	name
156192475	CV1904217	single nucleotide variant	NM_015915.5(ATL1):c.574-20G>A	Hereditary spastic paraplegia 3A [RCV002574458]	likely benign	14	50595556	50595556	Human	1	name
156325904	CV1972697	single nucleotide variant	NM_015915.5(ATL1):c.573+14T>C	Hereditary spastic paraplegia 3A [RCV002600524]	likely benign	14	50593910	50593910	Human	1	name
156201102	CV2010911	single nucleotide variant	NM_015915.5(ATL1):c.862+15A>G	Hereditary spastic paraplegia 3A [RCV002700282]	likely benign\|uncertain significance	14	50614526	50614526	Human	1	name
156214611	CV2028594	single nucleotide variant	NM_015915.5(ATL1):c.418-14C>G	Hereditary spastic paraplegia 3A [RCV002711900]	likely benign	14	50591521	50591521	Human	1	name
155953627	CV2043874	single nucleotide variant	NM_015915.5(ATL1):c.991-16T>C	Hereditary spastic paraplegia 3A [RCV002775905]	likely benign	14	50621827	50621827	Human	1	name
155937168	CV2071481	single nucleotide variant	NM_015915.5(ATL1):c.574-19T>C	Hereditary spastic paraplegia 3A [RCV002839161]	likely benign	14	50595557	50595557	Human	1	name
156233216	CV2108515	single nucleotide variant	NM_015915.5(ATL1):c.282+15C>T	Hereditary spastic paraplegia 3A [RCV002919016]	likely benign	14	50588093	50588093	Human	1	name
156249650	CV2129940	single nucleotide variant	NM_015915.5(ATL1):c.990+14T>C	Hereditary spastic paraplegia 3A [RCV002959162]	likely benign	14	50620740	50620740	Human	1	name
156096163	CV2163385	single nucleotide variant	NM_015915.5(ATL1):c.990+19G>C	Hereditary spastic paraplegia 3A [RCV003038399]	likely benign	14	50620745	50620745	Human	1	name
156365813	CV2192257	single nucleotide variant	NM_015915.5(ATL1):c.863-12T>C	Hereditary spastic paraplegia 3A [RCV003065943]	likely benign	14	50620587	50620587	Human	1	name
402467376	CV2862833	deletion	NM_015915.5(ATL1):c.283-20del	Hereditary spastic paraplegia 3A [RCV003503528]	likely benign	14	50590921	50590921	Human	1	name
405064590	CV2936679	single nucleotide variant	NM_015915.5(ATL1):c.631-20C>G	Hereditary spastic paraplegia 3A [RCV003611695]	likely benign	14	50613239	50613239	Human	1	name
405062393	CV3048101	single nucleotide variant	NM_015915.5(ATL1):c.282+18T>G	Hereditary spastic paraplegia 3A [RCV003611447]	likely benign	14	50588096	50588096	Human	1	name
404979171	CV3127765	single nucleotide variant	NM_015915.5(ATL1):c.630+15A>T	Hereditary spastic paraplegia 3A [RCV003825797]	likely benign	14	50595647	50595647	Human	1	name
405245662	CV3161899	single nucleotide variant	NM_015915.5(ATL1):c.1047+4T>C	Hereditary spastic paraplegia 3A [RCV003868612]	uncertain significance	14	50621903	50621903	Human	1	name
402467362	CV3174074	single nucleotide variant	NM_015915.5(ATL1):c.1048-7T>C	Hereditary spastic paraplegia 3A [RCV003873357]	likely benign	14	50623170	50623170	Human	1	name
402515181	CV3178869	single nucleotide variant	NM_015915.5(ATL1):c.283-20T>C	Hereditary spastic paraplegia 3A [RCV003879302]	likely benign	14	50590921	50590921	Human	1	name
11603630	CV320667	single nucleotide variant	NM_015915.5(ATL1):c.523-13T>C	Hereditary spastic paraplegia 3A [RCV000301726]	likely benign\|uncertain significance	14	50593833	50593833	Human	1	name
405700960	CV3225915	single nucleotide variant	NM_015915.5(ATL1):c.1566+1G>C	Hereditary spastic paraplegia 3A [RCV003989354]	uncertain significance	14	50630010	50630010	Human	1	name
597841790	CV3752893	single nucleotide variant	NM_015915.5(ATL1):c.990+20A>G	Hereditary spastic paraplegia 3A [RCV005086622]\|not specified [RCV005407385]	likely benign\|uncertain significance	14	50620746	50620746	Human	1	name
597969819	CV3791718	single nucleotide variant	NM_015915.5(ATL1):c.574-14A>G	Hereditary spastic paraplegia 3A [RCV005141535]	likely benign	14	50595562	50595562	Human	1	name
14708360	CV666576	single nucleotide variant	NM_015915.5(ATL1):c.990+11C>T	Hereditary spastic paraplegia 3A [RCV002538254]\|not provided [RCV000827120]	likely benign	14	50620737	50620737	Human	1	name
14716215	CV667665	single nucleotide variant	NM_015915.5(ATL1):c.863-54A>G	Hereditary spastic paraplegia 3A [RCV001554129]\|not provided [RCV000829653]	benign	14	50620545	50620545	Human	1	name
15107096	CV695621	single nucleotide variant	NM_015915.5(ATL1):c.1551+9A>G	Hereditary spastic paraplegia 3A [RCV002539963]	likely benign	14	50628471	50628471	Human	1	name
15098224	CV776271	single nucleotide variant	NM_015915.5(ATL1):c.723+10A>C	Hereditary spastic paraplegia 3A [RCV002068689]	likely benign	14	50613361	50613361	Human	1	name
127306017	CV1144632	single nucleotide variant	NM_015915.5(ATL1):c.1047+10A>G	Hereditary spastic paraplegia 3A [RCV001479901]	likely benign	14	50621909	50621909	Human	1	name
150336561	CV1165064	single nucleotide variant	NM_015915.5(ATL1):c.631-166G>A	not provided [RCV001530899]	likely benign	14	50613093	50613093	Human		name
150422101	CV1194843	single nucleotide variant	NM_015915.5(ATL1):c.1567-78A>G	not provided [RCV001570844]	likely benign	14	50632151	50632151	Human		name
150418631	CV1198543	single nucleotide variant	NM_015915.5(ATL1):c.990+287T>C	not provided [RCV001576824]	likely benign	14	50621013	50621013	Human		name
150461031	CV1205854	single nucleotide variant	NM_015915.5(ATL1):c.1120-47A>C	not provided [RCV001586811]	likely benign	14	50627984	50627984	Human		name
150487572	CV1208125	deletion	NM_015915.5(ATL1):c.990+281del	not provided [RCV001591985]	likely benign	14	50621007	50621007	Human		name
150442332	CV1266212	deletion	NM_015915.5(ATL1):c.630+264del	not provided [RCV001690648]	benign	14	50595886	50595886	Human		name
150473178	CV1281382	single nucleotide variant	NM_015915.5(ATL1):c.1048-58G>A	not provided [RCV001713487]	benign	14	50623119	50623119	Human		name
150473184	CV1281384	single nucleotide variant	NM_015915.5(ATL1):c.418-175T>C	not provided [RCV001713488]	benign	14	50591360	50591360	Human		name
151352659	CV1321766	single nucleotide variant	NM_015915.5(ATL1):c.1551+41T>C	not provided [RCV001812616]	likely benign	14	50628503	50628503	Human		name
151787756	CV1463801	single nucleotide variant	NM_015915.5(ATL1):c.1047+20C>T	Hereditary spastic paraplegia 3A [RCV001896807]	uncertain significance	14	50621919	50621919	Human	1	name
152076448	CV1542897	single nucleotide variant	NM_015915.5(ATL1):c.1567-18T>C	Hereditary spastic paraplegia 3A [RCV002130282]	likely benign	14	50632211	50632211	Human	1	name
152047705	CV1569518	single nucleotide variant	NM_015915.5(ATL1):c.1047+18G>A	Hereditary spastic paraplegia 3A [RCV002126842]	likely benign	14	50621917	50621917	Human	1	name
156403096	CV1885639	single nucleotide variant	NM_015915.5(ATL1):c.1120-10T>C	Hereditary spastic paraplegia 3A [RCV003069401]	likely benign	14	50628021	50628021	Human	1	name
402470143	CV2892948	single nucleotide variant	NM_015915.5(ATL1):c.1566+10A>T	Hereditary spastic paraplegia 3A [RCV003504313]	likely benign	14	50630019	50630019	Human	1	name
405131872	CV2903236	deletion	NM_015915.5(ATL1):c.1567-12del	Hereditary spastic paraplegia 3A [RCV003502225]	likely benign	14	50632217	50632217	Human	1	name
405070302	CV3058336	duplication	NM_015915.5(ATL1):c.1566+10dup	Hereditary spastic paraplegia 3A [RCV003612132]	likely benign	14	50630016	50630017	Human	1	name
405076262	CV3079904	single nucleotide variant	NM_015915.5(ATL1):c.1119+19A>G	Hereditary spastic paraplegia 3A [RCV003612423]	likely benign	14	50623267	50623267	Human	1	name
405201111	CV3143516	single nucleotide variant	NM_015915.5(ATL1):c.1551+10C>T	Hereditary spastic paraplegia 3A [RCV003844502]	likely benign	14	50628472	50628472	Human	1	name
11661247	CV329486	single nucleotide variant	NM_015915.5(ATL1):c.1567-14T>C	Hereditary spastic paraplegia 3A [RCV000374246]	uncertain significance	14	50632215	50632215	Human	1	name
597850392	CV3746899	single nucleotide variant	NM_015915.5(ATL1):c.1567-13G>A	Hereditary spastic paraplegia 3A [RCV005060527]	likely benign	14	50632216	50632216	Human	1	name
597922409	CV3812240	single nucleotide variant	NM_015915.5(ATL1):c.1048-20A>G	Hereditary spastic paraplegia 3A [RCV005155877]	likely benign	14	50623157	50623157	Human	1	name
13541005	CV505081	single nucleotide variant	NM_015915.5(ATL1):c.1047+12T>C	Hereditary spastic paraplegia 3A [RCV002528608]\|not specified [RCV000615533]	likely benign	14	50621911	50621911	Human	1	name
14723796	CV666570	single nucleotide variant	NM_015915.5(ATL1):c.522+154G>A	not provided [RCV000832696]	benign	14	50591793	50591793	Human		name
14734606	CV666571	single nucleotide variant	NM_015915.5(ATL1):c.862+220C>T	not provided [RCV000837633]	benign	14	50614731	50614731	Human		name
14710397	CV666574	single nucleotide variant	NM_015915.5(ATL1):c.862+286C>T	not provided [RCV000827690]	benign	14	50614797	50614797	Human		name
14708500	CV666583	single nucleotide variant	NM_015915.5(ATL1):c.1551+11C>G	Hereditary spastic paraplegia 3A [RCV002067436]\|not provided [RCV000827167]	likely benign	14	50628473	50628473	Human	1	name
14734604	CV667345	single nucleotide variant	NM_015915.5(ATL1):c.523-112A>G	not provided [RCV000837632]	benign	14	50593734	50593734	Human		name
14716207	CV667348	single nucleotide variant	NM_015915.5(ATL1):c.574-132G>A	not provided [RCV000829651]	benign	14	50595444	50595444	Human	5	name
14716211	CV667481	single nucleotide variant	NM_015915.5(ATL1):c.630+105G>A	Neuropathy, hereditary sensory, type 1D [RCV001554128]\|not provided [RCV000829652]	benign	14	50595737	50595737	Human	1	name
14734631	CV667486	single nucleotide variant	NM_015915.5(ATL1):c.990+245G>A	not provided [RCV000837644]	benign	14	50620971	50620971	Human		name
14729144	CV667671	single nucleotide variant	NM_015915.5(ATL1):c.1567-77C>A	not provided [RCV000835092]	benign	14	50632152	50632152	Human		name
28868312	CV872367	single nucleotide variant	NM_015915.5(ATL1):c.1120-15C>T	Hereditary spastic paraplegia 3A [RCV001112391]	conflicting interpretations of pathogenicity\|uncertain significance	14	50628016	50628016	Human	1	name
150423929	CV1184891	duplication	NM_015915.5(ATL1):c.1567-195dup	not provided [RCV001555981]	likely benign	14	50632033	50632034	Human		name
150503865	CV1212568	single nucleotide variant	NM_015915.5(ATL1):c.1551+249T>C	not provided [RCV001595443]	benign	14	50628711	50628711	Human		name
150511796	CV1212838	single nucleotide variant	NM_015915.5(ATL1):c.1119+150A>G	not provided [RCV001598070]	benign	14	50623398	50623398	Human		name
150507988	CV1213911	single nucleotide variant	NM_015915.5(ATL1):c.1551+158T>C	not provided [RCV001596432]	likely benign	14	50628620	50628620	Human		name
150484089	CV1280361	single nucleotide variant	NM_015915.5(ATL1):c.1552-176C>T	not provided [RCV001715304]	benign	14	50629819	50629819	Human		name
14734634	CV666578	single nucleotide variant	NM_015915.5(ATL1):c.1048-168G>T	not provided [RCV000837645]	benign	14	50623009	50623009	Human		name
14732407	CV666584	single nucleotide variant	NM_015915.5(ATL1):c.1551+241A>G	not provided [RCV000836569]	likely benign	14	50628703	50628703	Human		name
14734638	CV667349	single nucleotide variant	NM_015915.5(ATL1):c.1119+149T>G	Hereditary spastic paraplegia 3A [RCV001554131]\|not provided [RCV000837647]	benign	14	50623397	50623397	Human	1	name
150407768	CV1182455	microsatellite	NM_015915.5(ATL1):c.574-57TC[11]	Hereditary spastic paraplegia 3A [RCV001554127]\|not provided [RCV001685519]	benign	14	50595519	50595520	Human		name
401797888	CV2741061	single nucleotide variant	NM_015915.5(ATL1):c.1120-1086T>C	not provided [RCV003322225]	uncertain significance	14	50626945	50626945	Human		name
11650854	CV329462	single nucleotide variant	NM_001127713.1(ATL1):c.-139-16C>G	Hereditary spastic paraplegia 3A [RCV000295582]	uncertain significance	14	50560111	50560111	Human	1	name
14734599	CV666568	single nucleotide variant	NM_001127713.1(ATL1):c.-140+55A>T	not provided [RCV000837630]	benign	14	50533422	50533422	Human		name
14734602	CV667341	single nucleotide variant	NM_001127713.1(ATL1):c.-140+60G>A	not provided [RCV000837631]	benign	14	50533427	50533427	Human		name
8583826	CV118391	single nucleotide variant	NM_001127713.1(ATL1):c.34+10843A>C	Lung cancer [RCV000098911]	uncertain significance	14	50571142	50571142	Human		name
150462839	CV1253719	single nucleotide variant	NM_001127713.1(ATL1):c.-140+108C>T	not provided [RCV001669761]	benign	14	50533475	50533475	Human		name
156191793	CV2171256	microsatellite	NM_015915.5(ATL1):c.631-9_631-7del	Hereditary spastic paraplegia 3A [RCV003024155]	likely benign	14	50613245	50613247	Human		name
151787801	CV1477051	deletion	NM_015915.5(ATL1):c.723+3_723+19del	Hereditary spastic paraplegia 3A [RCV001896995]\|Hereditary spastic paraplegia 3A [RCV002478323]	uncertain significance	14	50613350	50613366	Human	1	name
155908989	CV2156781	single nucleotide variant	NM_015915.5(ATL1):c.22A>C (p.Arg8=)	Hereditary spastic paraplegia 3A [RCV003012113]	likely benign	14	50560287	50560287	Human	1	name
127302074	CV1144627	single nucleotide variant	NM_015915.5(ATL1):c.60A>G (p.Glu20=)	Hereditary spastic paraplegia 3A [RCV001478858]	likely benign	14	50587856	50587856	Human	1	name
156391265	CV1872809	deletion	NM_015915.5(ATL1):c.991-12_991-11del	Hereditary spastic paraplegia 3A [RCV003051346]	likely benign	14	50621830	50621831	Human	1	name
156137501	CV2048188	microsatellite	NM_015915.5(ATL1):c.522+25_522+27del	Hereditary spastic paraplegia 3A [RCV002800834]	likely benign	14	50591659	50591661	Human		name
402467136	CV3174016	single nucleotide variant	NM_015915.5(ATL1):c.54A>G (p.Thr18=)	Hereditary spastic paraplegia 3A [RCV003873299]	likely benign	14	50587850	50587850	Human	1	name
8601224	CV34386	single nucleotide variant	NM_015915.5(ATL1):c.84A>G (p.Pro28=)	Hereditary spastic paraplegia 3A [RCV000020724]\|Hereditary spastic paraplegia [RCV001847618]\|Neuropathy, hereditary sensory, type 1D [RCV002259567]\|not provided [RCV004715648]\|not specified [RCV000116421]	benign\|likely benign\|conflicting interpretations of pathogenicity	14	50587880	50587880	Human	3	name
597972073	CV3794118	deletion	NM_015915.5(ATL1):c.417+23_417+27del	Hereditary spastic paraplegia 3A [RCV005142484]	likely benign	14	50591094	50591098	Human	1	name
13493591	CV464156	single nucleotide variant	NM_015915.5(ATL1):c.30T>C (p.Ser10=)	Hereditary spastic paraplegia 3A [RCV000558302]\|Inborn genetic diseases [RCV002324019]\|Neuropathy, hereditary sensory, type 1D [RCV002260013]\|not specified [RCV001662576]	benign\|likely benign	14	50560295	50560295	Human	3	name
15134370	CV684496	single nucleotide variant	NM_015915.5(ATL1):c.45G>A (p.Ser15=)	Hereditary spastic paraplegia 3A [RCV000864125]	likely benign	14	50587841	50587841	Human	1	name
15160442	CV688303	single nucleotide variant	NM_015915.5(ATL1):c.90A>G (p.Lys30=)	Hereditary spastic paraplegia 3A [RCV000869014]	benign	14	50587886	50587886	Human	1	name
127265001	CV1102326	single nucleotide variant	NM_015915.5(ATL1):c.135C>T (p.Ser45=)	Hereditary spastic paraplegia 3A [RCV001439774]	likely benign	14	50587931	50587931	Human	1	name
150556153	CV1296693	single nucleotide variant	NM_015915.5(ATL1):c.19G>A (p.Asp7Asn)	not provided [RCV001773983]	uncertain significance	14	50560284	50560284	Human		name
152070599	CV1628436	single nucleotide variant	NM_015915.5(ATL1):c.177G>C (p.Ser59=)	Hereditary spastic paraplegia 3A [RCV002169238]	likely benign	14	50587973	50587973	Human	1	name
156311592	CV1899974	deletion	NM_015915.5(ATL1):c.1120-11_1120-8del	Hereditary spastic paraplegia 3A [RCV003088482]	likely benign	14	50628017	50628020	Human	1	name
156180553	CV2068433	single nucleotide variant	NM_015915.5(ATL1):c.114C>T (p.Leu38=)	Hereditary spastic paraplegia 3A [RCV002851822]	likely benign	14	50587910	50587910	Human	1	name
402470112	CV2882675	single nucleotide variant	NM_015915.5(ATL1):c.177G>A (p.Ser59=)	Hereditary spastic paraplegia 3A [RCV003504305]\|not specified [RCV005407178]	likely benign	14	50587973	50587973	Human	1	name
402469721	CV2885192	single nucleotide variant	NM_015915.5(ATL1):c.192C>T (p.Asp64=)	Hereditary spastic paraplegia 3A [RCV003504172]	likely benign	14	50587988	50587988	Human	1	name
405065857	CV2948684	single nucleotide variant	NM_015915.5(ATL1):c.249G>A (p.Leu83=)	Hereditary spastic paraplegia 3A [RCV003611797]	likely benign	14	50588045	50588045	Human	1	name
405071702	CV3065639	single nucleotide variant	NM_015915.5(ATL1):c.126T>C (p.Asp42=)	Hereditary spastic paraplegia 3A [RCV003612204]	likely benign	14	50587922	50587922	Human	1	name
405072256	CV3066351	single nucleotide variant	NM_015915.5(ATL1):c.111C>A (p.Val37=)	Hereditary spastic paraplegia 3A [RCV003612242]	likely benign	14	50587907	50587907	Human	1	name
405199763	CV3128853	single nucleotide variant	NM_015915.5(ATL1):c.26A>G (p.Asn9Ser)	Hereditary spastic paraplegia 3A [RCV003821896]	uncertain significance	14	50560291	50560291	Human	1	name
405691581	CV3227512	insertion	NM_015915.5(ATL1):c.991-12_991-11insA	Hereditary spastic paraplegia 3A [RCV003991857]	uncertain significance	14	50621831	50621832	Human	1	name
597836005	CV3757603	single nucleotide variant	NM_015915.5(ATL1):c.210A>G (p.Val70=)	Hereditary spastic paraplegia 3A [RCV005085617]	likely benign	14	50588006	50588006	Human	1	name
597942484	CV3757808	single nucleotide variant	NM_015915.5(ATL1):c.11A>G (p.Asn4Ser)	Hereditary spastic paraplegia 3A [RCV005077807]	uncertain significance	14	50560276	50560276	Human	1	name
597915819	CV3860916	single nucleotide variant	NM_015915.5(ATL1):c.282G>A (p.Gln94=)	Hereditary spastic paraplegia 3A [RCV005204279]	uncertain significance	14	50588078	50588078	Human	1	name
13620977	CV528546	single nucleotide variant	NM_015915.5(ATL1):c.27C>G (p.Asn9Lys)	Hereditary spastic paraplegia 3A [RCV000647933]\|Inborn genetic diseases [RCV002440339]\|not provided [RCV005231230]	likely benign\|uncertain significance	14	50560292	50560292	Human	2	name
127244936	CV1080534	single nucleotide variant	NM_015915.5(ATL1):c.318A>T (p.Pro106=)	Hereditary spastic paraplegia 3A [RCV001393791]	likely benign	14	50590976	50590976	Human	1	name
127319078	CV1144628	single nucleotide variant	NM_015915.5(ATL1):c.570C>A (p.Leu190=)	Hereditary spastic paraplegia 3A [RCV001503916]	likely benign	14	50593893	50593893	Human	1	name
127306181	CV1144630	single nucleotide variant	NM_015915.5(ATL1):c.654C>T (p.Asp218=)	Hereditary spastic paraplegia 3A [RCV001479960]	likely benign	14	50613282	50613282	Human	1	name
127319289	CV1144631	single nucleotide variant	NM_015915.5(ATL1):c.735C>T (p.Asn245=)	Hereditary spastic paraplegia 3A [RCV001503977]	likely benign	14	50614384	50614384	Human	1	name
150419440	CV1198542	deletion	NM_015915.5(ATL1):c.723+273_723+277del	not provided [RCV001577182]	likely benign	14	50613624	50613628	Human		name
150446837	CV1201785	deletion	NM_015915.5(ATL1):c.1566+49_1566+51del	not provided [RCV001584653]	likely benign	14	50630056	50630058	Human		name
150469994	CV1268189	deletion	NM_015915.5(ATL1):c.1552-24_1552-20del	Hereditary spastic paraplegia 3A [RCV002260340]\|Neuropathy, hereditary sensory, type 1D [RCV002260341]\|not provided [RCV001695053]	benign	14	50629967	50629971	Human	2	name
150536317	CV1309565	single nucleotide variant	NM_015915.5(ATL1):c.38G>A (p.Gly13Glu)	not provided [RCV003238611]	uncertain significance	14	50587834	50587834	Human		name
151805742	CV1467766	single nucleotide variant	NM_015915.5(ATL1):c.44C>T (p.Ser15Leu)	Hereditary spastic paraplegia 3A [RCV001931650]\|Inborn genetic diseases [RCV003365579]	likely benign\|uncertain significance	14	50587840	50587840	Human	2	name
151807663	CV1480345	single nucleotide variant	NM_015915.5(ATL1):c.38G>C (p.Gly13Ala)	Hereditary spastic paraplegia 3A [RCV001935161]	uncertain significance	14	50587834	50587834	Human	1	name
151807925	CV1487412	single nucleotide variant	NM_015915.5(ATL1):c.33G>C (p.Trp11Cys)	Hereditary spastic paraplegia 3A [RCV001935822]\|Inborn genetic diseases [RCV002458798]	uncertain significance	14	50560298	50560298	Human	2	name
151832061	CV1508270	single nucleotide variant	NM_015915.5(ATL1):c.86T>C (p.Val29Ala)	Hereditary spastic paraplegia 3A [RCV001986234]	uncertain significance	14	50587882	50587882	Human	1	name
152075552	CV1523370	single nucleotide variant	NM_015915.5(ATL1):c.873T>C (p.Asp291=)	Hereditary spastic paraplegia 3A [RCV002169864]	likely benign	14	50620609	50620609	Human	1	name
152044898	CV1588676	single nucleotide variant	NM_015915.5(ATL1):c.426G>A (p.Val142=)	Hereditary spastic paraplegia 3A [RCV002188720]	likely benign	14	50591543	50591543	Human	1	name
152049927	CV1602663	single nucleotide variant	NM_015915.5(ATL1):c.927C>T (p.Ser309=)	Hereditary spastic paraplegia 3A [RCV002127115]	likely benign	14	50620663	50620663	Human	1	name
152103815	CV1645360	single nucleotide variant	NM_015915.5(ATL1):c.699C>T (p.Ala233=)	Hereditary spastic paraplegia 3A [RCV002133597]	likely benign	14	50613327	50613327	Human	1	name
155699095	CV1813344	single nucleotide variant	NM_015915.5(ATL1):c.75G>C (p.Glu25Asp)	Inborn genetic diseases [RCV002394243]	uncertain significance	14	50587871	50587871	Human	1	name
156055802	CV1892046	single nucleotide variant	NM_015915.5(ATL1):c.70G>C (p.Glu24Gln)	Hereditary spastic paraplegia 3A [RCV003079042]\|Inborn genetic diseases [RCV003079043]	likely benign\|uncertain significance	14	50587866	50587866	Human	2	name
156411843	CV1972762	single nucleotide variant	NM_015915.5(ATL1):c.35G>A (p.Gly12Asp)	Hereditary spastic paraplegia 3A [RCV002587623]	uncertain significance	14	50587831	50587831	Human	1	name
156215629	CV2070641	single nucleotide variant	NM_015915.5(ATL1):c.55T>A (p.Tyr19Asn)	Hereditary spastic paraplegia 3A [RCV002829483]	uncertain significance	14	50587851	50587851	Human	1	name
10408112	CV213112	single nucleotide variant	NM_015915.5(ATL1):c.300T>G (p.Val100=)	Hereditary spastic paraplegia 3A [RCV000199958]\|Inborn genetic diseases [RCV002433889]	likely benign\|conflicting interpretations of pathogenicity\|uncertain significance	14	50590958	50590958	Human	2	name
156120738	CV2183290	single nucleotide variant	NM_015915.5(ATL1):c.576T>G (p.Leu192=)	Hereditary spastic paraplegia 3A [RCV003039304]	likely benign	14	50595578	50595578	Human	1	name
401902006	CV2810413	single nucleotide variant	NM_015915.5(ATL1):c.486A>G (p.Thr162=)	not provided [RCV003393424]	likely benign	14	50591603	50591603	Human		name
402470128	CV2892814	single nucleotide variant	NM_015915.5(ATL1):c.582T>G (p.Thr194=)	Hereditary spastic paraplegia 3A [RCV003504309]	likely benign	14	50595584	50595584	Human	1	name
402470322	CV2893352	single nucleotide variant	NM_015915.5(ATL1):c.450C>A (p.Thr150=)	Hereditary spastic paraplegia 3A [RCV003504362]	likely benign	14	50591567	50591567	Human	1	name
402465673	CV2920235	single nucleotide variant	NM_015915.5(ATL1):c.531C>T (p.Asn177=)	Hereditary spastic paraplegia 3A [RCV003503070]	likely benign	14	50593854	50593854	Human	1	name
402469003	CV2927152	single nucleotide variant	NM_015915.5(ATL1):c.48A>C (p.Glu16Asp)	Hereditary spastic paraplegia 3A [RCV003503977]	uncertain significance	14	50587844	50587844	Human	1	name
405064855	CV2940381	single nucleotide variant	NM_015915.5(ATL1):c.552G>A (p.Glu184=)	Hereditary spastic paraplegia 3A [RCV003611715]	likely benign	14	50593875	50593875	Human	1	name
405086316	CV3016445	single nucleotide variant	NM_015915.5(ATL1):c.634C>T (p.Leu212=)	Hereditary spastic paraplegia 3A [RCV003613360]	likely benign	14	50613262	50613262	Human	1	name
405073133	CV3075736	single nucleotide variant	NM_015915.5(ATL1):c.348T>C (p.Ser116=)	Hereditary spastic paraplegia 3A [RCV003612306]	likely benign	14	50591006	50591006	Human	1	name
405207852	CV3145614	single nucleotide variant	NM_015915.5(ATL1):c.996T>C (p.Tyr332=)	Hereditary spastic paraplegia 3A [RCV003845344]	likely benign	14	50621848	50621848	Human	1	name
405231905	CV3157436	single nucleotide variant	NM_015915.5(ATL1):c.444G>A (p.Gln148=)	Hereditary spastic paraplegia 3A [RCV003865386]	likely benign	14	50591561	50591561	Human	1	name
11609482	CV320668	single nucleotide variant	NM_015915.5(ATL1):c.705C>T (p.Phe235=)	Hereditary spastic paraplegia 3A [RCV000462387]\|Hereditary spastic paraplegia [RCV001848112]\|Neuropathy, hereditary sensory, type 1D [RCV002259849]\|not provided [RCV001812807]\|not specified [RCV000428403]	benign\|likely benign	14	50613333	50613333	Human	3	name
11614071	CV329479	single nucleotide variant	NM_015915.5(ATL1):c.756C>T (p.Asn252=)	Hereditary spastic paraplegia 3A [RCV000871475]\|Inborn genetic diseases [RCV002392857]\|not specified [RCV004999300]	likely benign\|conflicting interpretations of pathogenicity\|uncertain significance	14	50614405	50614405	Human	2	name
11620201	CV329480	single nucleotide variant	NM_015915.5(ATL1):c.969G>C (p.Arg323=)	Hereditary spastic paraplegia 3A [RCV001435351]\|Inborn genetic diseases [RCV002374532]\|Spastic paraplegia, autosomal dominant [RCV000333856]	likely benign\|uncertain significance	14	50620705	50620705	Human	3	name
11620431	CV336024	single nucleotide variant	NM_015915.5(ATL1):c.408T>C (p.Asp136=)	ATL1-related disorder [RCV003940214]\|Hereditary spastic paraplegia 3A [RCV000551365]\|Hereditary spastic paraplegia 3A [RCV002502228]\|Hereditary spastic paraplegia [RCV001848109]\|Neuropathy, hereditary sensory, type 1D [RCV002259845]	benign\|likely benign	14	50591066	50591066	Human	3	name , trait , alternate_id
11613950	CV336046	single nucleotide variant	NM_015915.5(ATL1):c.669C>T (p.Tyr223=)	ATL1-related disorder [RCV003910175]\|Hereditary spastic paraplegia 3A [RCV000471358]\|Hereditary spastic paraplegia [RCV001848111]\|Inborn genetic diseases [RCV002365365]\|Neuropathy, hereditary sensory, type 1D [RCV002259847]\|not provided [RCV001531188]\|not specif ... (more) ied [RCV000427052]	benign\|likely benign\|conflicting interpretations of pathogenicity	14	50613297	50613297	Human	4	name , trait , alternate_id
11617952	CV337982	single nucleotide variant	NM_015915.5(ATL1):c.693T>C (p.Gly231=)	ATL1-related disorder [RCV003910176]\|Hereditary spastic paraplegia 3A [RCV001083267]\|Inborn genetic diseases [RCV002365366]\|Neuropathy, hereditary sensory, type 1D [RCV002259848]\|not provided [RCV000713456]\|not specified [RCV000419034]	benign\|likely benign	14	50613321	50613321	Human	3	name , trait , alternate_id
8601220	CV34382	single nucleotide variant	NM_015915.5(ATL1):c.351G>A (p.Glu117=)	Hereditary spastic paraplegia 3A [RCV000020720]\|Hereditary spastic paraplegia 3A [RCV002496429]\|Hereditary spastic paraplegia [RCV001847616]\|Neuropathy, hereditary sensory, type 1D [RCV001553934]\|not provided [RCV000860187]\|not specified [RCV000116420]	benign\|likely benign	14	50591009	50591009	Human	3	name
8601223	CV34385	single nucleotide variant	NM_015915.5(ATL1):c.621G>A (p.Lys207=)	Hereditary spastic paraplegia 3A [RCV000020723]\|Hereditary spastic paraplegia [RCV001847617]\|Inborn genetic diseases [RCV002362591]\|Neuropathy, hereditary sensory, type 1D [RCV002259566]\|not provided [RCV004704813]\|not specified [RCV000430134]	benign\|likely benign	14	50595623	50595623	Human	4	name
12833659	CV374244	single nucleotide variant	NM_015915.5(ATL1):c.687C>T (p.Ala229=)	Inborn genetic diseases [RCV002365464]\|not provided [RCV001712180]	likely benign	14	50613315	50613315	Human	1	name
597853983	CV3762403	single nucleotide variant	NM_015915.5(ATL1):c.55T>C (p.Tyr19His)	not specified [RCV005088319]	uncertain significance	14	50587851	50587851	Human		name
597956133	CV3787280	single nucleotide variant	NM_015915.5(ATL1):c.354A>G (p.Arg118=)	Hereditary spastic paraplegia 3A [RCV005122165]	likely benign	14	50591012	50591012	Human	1	name
597904361	CV3846034	single nucleotide variant	NM_015915.5(ATL1):c.633T>C (p.Ser211=)	Hereditary spastic paraplegia 3A [RCV005181656]\|not provided [RCV005426430]	likely benign	14	50613261	50613261	Human	1	name
13532064	CV505073	single nucleotide variant	NM_015915.5(ATL1):c.780T>C (p.Cys260=)	Inborn genetic diseases [RCV002413736]\|not specified [RCV000606680]	likely benign	14	50614429	50614429	Human	1	name
13620974	CV528201	single nucleotide variant	NM_015915.5(ATL1):c.46G>C (p.Glu16Gln)	Hereditary spastic paraplegia 3A [RCV000647930]\|not provided [RCV005231229]	uncertain significance	14	50587842	50587842	Human	1	name
13620984	CV528567	single nucleotide variant	NM_015915.5(ATL1):c.570C>G (p.Leu190=)	Hereditary spastic paraplegia 3A [RCV000647938]\|Hereditary spastic paraplegia [RCV001849026]\|Neuropathy, hereditary sensory, type 1D [RCV002260038]	benign\|likely benign	14	50593893	50593893	Human	3	name
15119717	CV693510	single nucleotide variant	NM_015915.5(ATL1):c.879C>T (p.Phe293=)	Hereditary spastic paraplegia 3A [RCV001439856]	likely benign	14	50620615	50620615	Human	1	name
15194803	CV725678	single nucleotide variant	NM_015915.5(ATL1):c.483C>T (p.Ala161=)	Hereditary spastic paraplegia 3A [RCV001482328]	likely benign	14	50591600	50591600	Human	1	name
38460103	CV936632	single nucleotide variant	NM_015915.5(ATL1):c.61T>C (p.Trp21Arg)	Hereditary spastic paraplegia 3A [RCV001211767]	uncertain significance	14	50587857	50587857	Human	1	name
41406415	CV982887	single nucleotide variant	NM_015915.5(ATL1):c.921C>T (p.Pro307=)	Hereditary spastic paraplegia 3A [RCV001483701]\|Neuropathy, hereditary sensory, type 1D [RCV002260150]\|not specified [RCV001288452]	benign\|likely benign	14	50620657	50620657	Human	2	name
126763704	CV1031623	single nucleotide variant	NM_015915.5(ATL1):c.196G>A (p.Glu66Lys)	Hereditary spastic paraplegia 3A [RCV001341383]	uncertain significance	14	50587992	50587992	Human	1	name
126924368	CV1048569	single nucleotide variant	NM_015915.5(ATL1):c.125A>T (p.Asp42Val)	Hereditary spastic paraplegia 3A [RCV001366952]	uncertain significance	14	50587921	50587921	Human	1	name
126922183	CV1048570	single nucleotide variant	NM_015915.5(ATL1):c.206C>T (p.Ala69Val)	Hereditary spastic paraplegia 3A [RCV001364369]	uncertain significance	14	50588002	50588002	Human	1	name
127243279	CV1080533	single nucleotide variant	NM_015915.5(ATL1):c.200T>C (p.Val67Ala)	Hereditary spastic paraplegia 3A [RCV001398337]	likely benign	14	50587996	50587996	Human	1	name
127230608	CV1080535	single nucleotide variant	NM_015915.5(ATL1):c.1332A>G (p.Ala444=)	Hereditary spastic paraplegia 3A [RCV001412552]	likely benign	14	50628243	50628243	Human	1	name
127253680	CV1080536	single nucleotide variant	NM_015915.5(ATL1):c.1434T>C (p.Asn478=)	Hereditary spastic paraplegia 3A [RCV001400616]	likely benign	14	50628345	50628345	Human	1	name
127241042	CV1080537	single nucleotide variant	NM_015915.5(ATL1):c.1452C>T (p.Thr484=)	Hereditary spastic paraplegia 3A [RCV001393042]	likely benign	14	50628363	50628363	Human	1	name
127235470	CV1102328	single nucleotide variant	NM_015915.5(ATL1):c.1542G>A (p.Leu514=)	ATL1-related disorder [RCV003930921]\|Hereditary spastic paraplegia 3A [RCV001433108]	likely benign	14	50628453	50628453	Human	1	name , trait , alternate_id
127322922	CV1144633	single nucleotide variant	NM_015915.5(ATL1):c.1137A>G (p.Lys379=)	Hereditary spastic paraplegia 3A [RCV001485091]	likely benign	14	50628048	50628048	Human	1	name
127313409	CV1144634	single nucleotide variant	NM_015915.5(ATL1):c.1158C>T (p.Asp386=)	Hereditary spastic paraplegia 3A [RCV001502153]	likely benign	14	50628069	50628069	Human	1	name
127314973	CV1157265	single nucleotide variant	NM_015915.5(ATL1):c.1329T>C (p.His443=)	Hereditary spastic paraplegia 3A [RCV001519822]	benign	14	50628240	50628240	Human	1	name
127322161	CV1157266	single nucleotide variant	NM_015915.5(ATL1):c.1458C>T (p.Ile486=)	Hereditary spastic paraplegia 3A [RCV001523392]	benign	14	50628369	50628369	Human	1	name
150516465	CV1287371	single nucleotide variant	NM_015915.5(ATL1):c.1332A>C (p.Ala444=)	Hereditary spastic paraplegia 3A [RCV002538671]\|not provided [RCV001723350]	likely benign	14	50628243	50628243	Human	1	name
150551707	CV1295192	single nucleotide variant	NM_015915.5(ATL1):c.209T>A (p.Val70Glu)	not provided [RCV001754485]	uncertain significance	14	50588005	50588005	Human		name
150556711	CV1305638	deletion	NM_015915.5(ATL1):c.535del (p.Ser179fs)	not provided [RCV001774628]	uncertain significance	14	50593858	50593858	Human		name
151832395	CV1349929	single nucleotide variant	NM_015915.5(ATL1):c.254A>G (p.Asp85Gly)	Hereditary spastic paraplegia 3A [RCV001987055]	uncertain significance	14	50588050	50588050	Human	1	name
151709346	CV1351431	single nucleotide variant	NM_015915.5(ATL1):c.1650T>A (p.Thr550=)	Hereditary spastic paraplegia 3A [RCV001992996]	likely benign\|uncertain significance	14	50632312	50632312	Human	1	name
151815059	CV1358689	single nucleotide variant	NM_015915.5(ATL1):c.178G>C (p.Glu60Gln)	Hereditary spastic paraplegia 3A [RCV001950632]	uncertain significance	14	50587974	50587974	Human	1	name
151790982	CV1367450	single nucleotide variant	NM_015915.5(ATL1):c.282G>C (p.Gln94His)	Hereditary spastic paraplegia 3A [RCV001903958]	uncertain significance	14	50588078	50588078	Human	1	name
151718149	CV1382129	single nucleotide variant	NM_015915.5(ATL1):c.115A>G (p.Ile39Val)	Hereditary spastic paraplegia 3A [RCV002028584]	uncertain significance	14	50587911	50587911	Human	1	name
151793567	CV1399408	single nucleotide variant	NM_015915.5(ATL1):c.1074A>C (p.Ala358=)	Hereditary spastic paraplegia 3A [RCV001908624]	likely benign	14	50623203	50623203	Human	1	name
151722715	CV1508691	single nucleotide variant	NM_015915.5(ATL1):c.133T>G (p.Ser45Ala)	Hereditary spastic paraplegia 3A [RCV002043441]	uncertain significance	14	50587929	50587929	Human	1	name
152170403	CV1567594	single nucleotide variant	NM_015915.5(ATL1):c.1377T>C (p.Tyr459=)	Hereditary spastic paraplegia 3A [RCV002183138]	likely benign	14	50628288	50628288	Human	1	name
152171726	CV1575593	single nucleotide variant	NM_015915.5(ATL1):c.1341C>T (p.Thr447=)	Hereditary spastic paraplegia 3A [RCV002183597]	likely benign	14	50628252	50628252	Human	1	name
152036703	CV1609889	single nucleotide variant	NM_015915.5(ATL1):c.1296T>C (p.Tyr432=)	Hereditary spastic paraplegia 3A [RCV002165065]	likely benign	14	50628207	50628207	Human	1	name
152045557	CV1614228	single nucleotide variant	NM_015915.5(ATL1):c.1428A>G (p.Leu476=)	Hereditary spastic paraplegia 3A [RCV002166235]	likely benign	14	50628339	50628339	Human	1	name
152083868	CV1645563	single nucleotide variant	NM_015915.5(ATL1):c.1245G>A (p.Arg415=)	Hereditary spastic paraplegia 3A [RCV002170900]	likely benign	14	50628156	50628156	Human	1	name
155671371	CV1829225	single nucleotide variant	NM_015915.5(ATL1):c.132T>A (p.His44Gln)	Inborn genetic diseases [RCV002385903]	uncertain significance	14	50587928	50587928	Human	1	name
156381492	CV1889868	single nucleotide variant	NM_015915.5(ATL1):c.1311T>C (p.Asp437=)	Hereditary spastic paraplegia 3A [RCV003093311]	likely benign	14	50628222	50628222	Human	1	name
156221894	CV1899849	single nucleotide variant	NM_015915.5(ATL1):c.1201C>T (p.Leu401=)	Hereditary spastic paraplegia 3A [RCV003085030]	likely benign	14	50628112	50628112	Human	1	name
156184574	CV1908725	single nucleotide variant	NM_015915.5(ATL1):c.1347C>T (p.Ala449=)	Hereditary spastic paraplegia 3A [RCV002595172]	likely benign	14	50628258	50628258	Human	1	name
10050002	CV191260	single nucleotide variant	NM_015915.5(ATL1):c.1200G>A (p.Lys400=)	Hereditary spastic paraplegia 3A [RCV001081632]\|Inborn genetic diseases [RCV002345600]\|not provided [RCV000724714]	benign\|likely benign\|conflicting interpretations of pathogenicity\|uncertain significance	14	50628111	50628111	Human	2	name
156437688	CV1947699	single nucleotide variant	NM_015915.5(ATL1):c.1374A>G (p.Thr458=)	Hereditary spastic paraplegia 3A [RCV003107228]	likely benign	14	50628285	50628285	Human	1	name
156009919	CV1989662	single nucleotide variant	NM_015915.5(ATL1):c.182C>T (p.Ala61Val)	Hereditary spastic paraplegia 3A [RCV002636166]\|Inborn genetic diseases [RCV005281206]	uncertain significance	14	50587978	50587978	Human	2	name
156398140	CV1990817	single nucleotide variant	NM_015915.5(ATL1):c.1077C>T (p.Ala359=)	Hereditary spastic paraplegia 3A [RCV002605340]	likely benign	14	50623206	50623206	Human	1	name
156047194	CV1996643	single nucleotide variant	NM_015915.5(ATL1):c.268T>C (p.Tyr90His)	Hereditary spastic paraplegia 3A [RCV002659245]\|not provided [RCV003151902]	uncertain significance	14	50588064	50588064	Human	1	name
155984628	CV2070305	single nucleotide variant	NM_015915.5(ATL1):c.271A>C (p.Met91Leu)	Hereditary spastic paraplegia 3A [RCV002842683]	uncertain significance	14	50588067	50588067	Human	1	name
156043331	CV2089759	single nucleotide variant	NM_015915.5(ATL1):c.1002G>A (p.Lys334=)	Hereditary spastic paraplegia 3A [RCV002867529]	likely benign	14	50621854	50621854	Human	1	name
156229152	CV2093720	single nucleotide variant	NM_015915.5(ATL1):c.1512A>G (p.Gly504=)	Hereditary spastic paraplegia 3A [RCV002894486]	likely benign	14	50628423	50628423	Human	1	name
156155828	CV2121973	single nucleotide variant	NM_015915.5(ATL1):c.261G>A (p.Met87Ile)	Hereditary spastic paraplegia 3A [RCV002929060]\|Inborn genetic diseases [RCV003274099]	uncertain significance	14	50588057	50588057	Human	2	name
10408067	CV213113	single nucleotide variant	NM_015915.5(ATL1):c.1641G>A (p.Ser547=)	Hereditary spastic paraplegia 3A [RCV001475871]\|Inborn genetic diseases [RCV002390529]	pathogenic\|likely pathogenic\|likely benign	14	50632303	50632303	Human	2	name
156082871	CV2169127	single nucleotide variant	NM_015915.5(ATL1):c.1392G>C (p.Val464=)	Hereditary spastic paraplegia 3A [RCV003037944]	likely benign	14	50628303	50628303	Human	1	name
156148109	CV2188522	single nucleotide variant	NM_015915.5(ATL1):c.179A>C (p.Glu60Ala)	Hereditary spastic paraplegia 3A [RCV003056433]	uncertain significance	14	50587975	50587975	Human	1	name
11348534	CV241848	single nucleotide variant	NM_015915.5(ATL1):c.1230G>A (p.Gly410=)	Hereditary spastic paraplegia 3A [RCV000227026]\|Hereditary spastic paraplegia 3A [RCV002494654]\|Hereditary spastic paraplegia [RCV001847999]\|Inborn genetic diseases [RCV002365211]\|Neuropathy, hereditary sensory, type 1D [RCV002259738]\|not provided [RCV001812648]\|not specified [RCV000613364]	benign\|likely benign	14	50628141	50628141	Human	4	name
329395306	CV2473083	single nucleotide variant	NM_015915.5(ATL1):c.208G>T (p.Val70Leu)	not provided [RCV003219067]	uncertain significance	14	50588004	50588004	Human		name
401780003	CV2725818	single nucleotide variant	NM_015915.5(ATL1):c.147T>G (p.Asp49Glu)	Inborn genetic diseases [RCV003287791]	uncertain significance	14	50587943	50587943	Human	1	name
401909132	CV2803838	single nucleotide variant	NM_015915.5(ATL1):c.218C>T (p.Ala73Val)	ATL1-related disorder [RCV003397779]	uncertain significance	14	50588014	50588014	Human		name , trait , alternate_id
401902008	CV2810415	single nucleotide variant	NM_015915.5(ATL1):c.1212G>A (p.Gly404=)	not provided [RCV003393426]	likely benign	14	50628123	50628123	Human		name
405075790	CV2952914	single nucleotide variant	NM_015915.5(ATL1):c.1485G>C (p.Arg495=)	Hereditary spastic paraplegia 3A [RCV003612510]	likely benign	14	50628396	50628396	Human	1	name
405058505	CV3031525	single nucleotide variant	NM_015915.5(ATL1):c.1203A>T (p.Leu401=)	Hereditary spastic paraplegia 3A [RCV003611148]	likely benign	14	50628114	50628114	Human	1	name
405071320	CV3065474	single nucleotide variant	NM_015915.5(ATL1):c.1035A>G (p.Lys345=)	Hereditary spastic paraplegia 3A [RCV003612177]	likely benign	14	50621887	50621887	Human	1	name
404978844	CV3127683	single nucleotide variant	NM_015915.5(ATL1):c.1449G>C (p.Leu483=)	Hereditary spastic paraplegia 3A [RCV003825715]	likely benign	14	50628360	50628360	Human	1	name
405181183	CV3147537	single nucleotide variant	NM_015915.5(ATL1):c.271A>G (p.Met91Val)	Hereditary spastic paraplegia 3A [RCV003842439]	uncertain significance	14	50588067	50588067	Human	1	name
402470425	CV3171143	single nucleotide variant	NM_015915.5(ATL1):c.1197G>C (p.Val399=)	Hereditary spastic paraplegia 3A [RCV003874106]	likely benign	14	50628108	50628108	Human	1	name
402495206	CV3183069	single nucleotide variant	NM_015915.5(ATL1):c.1611G>C (p.Leu537=)	Hereditary spastic paraplegia 3A [RCV003877377]	likely benign	14	50632273	50632273	Human	1	name
11601685	CV320669	single nucleotide variant	NM_015915.5(ATL1):c.1623T>G (p.Ala541=)	Hereditary spastic paraplegia 3A [RCV000875223]\|Inborn genetic diseases [RCV002402025]	likely benign\|conflicting interpretations of pathogenicity\|uncertain significance	14	50632285	50632285	Human	2	name
11612478	CV337983	single nucleotide variant	NM_015915.5(ATL1):c.1152A>G (p.Pro384=)	Hereditary spastic paraplegia 3A [RCV000865579]\|Inborn genetic diseases [RCV002348051]\|not specified [RCV000608836]	likely benign\|conflicting interpretations of pathogenicity\|uncertain significance	14	50628063	50628063	Human	2	name
11618957	CV337987	single nucleotide variant	NM_015915.5(ATL1):c.1173C>T (p.His391=)	Hereditary spastic paraplegia 3A [RCV001086937]\|Inborn genetic diseases [RCV002328826]\|not provided [RCV000487834]\|not specified [RCV000518429]	benign\|likely benign\|conflicting interpretations of pathogenicity\|uncertain significance	14	50628084	50628084	Human	2	name
8601219	CV34381	single nucleotide variant	NM_015915.5(ATL1):c.129C>G (p.Asp43Glu)	Hereditary spastic paraplegia 3A [RCV000020719]	benign\|not provided	14	50587925	50587925	Human	1	name
597656305	CV3731562	single nucleotide variant	NM_015915.5(ATL1):c.273G>A (p.Met91Ile)	not provided [RCV005001743]	uncertain significance	14	50588069	50588069	Human		name
597847463	CV3746358	single nucleotide variant	NM_015915.5(ATL1):c.109G>C (p.Val37Leu)	Hereditary spastic paraplegia 3A [RCV005060176]	uncertain significance	14	50587905	50587905	Human	1	name
597871793	CV3768399	deletion	NM_015915.5(ATL1):c.521del (p.Gln174fs)	Hereditary spastic paraplegia 3A [RCV005122778]	pathogenic	14	50591638	50591638	Human	1	name
597972978	CV3790859	single nucleotide variant	NM_015915.5(ATL1):c.1392G>A (p.Val464=)	Hereditary spastic paraplegia 3A [RCV005143074]	likely benign	14	50628303	50628303	Human	1	name
597948043	CV3800858	single nucleotide variant	NM_015915.5(ATL1):c.1341C>G (p.Thr447=)	Hereditary spastic paraplegia 3A [RCV005135258]	likely benign	14	50628252	50628252	Human	1	name
597836351	CV3828416	single nucleotide variant	NM_015915.5(ATL1):c.1426C>T (p.Leu476=)	Hereditary spastic paraplegia 3A [RCV005171308]	likely benign	14	50628337	50628337	Human	1	name
597935806	CV3845304	single nucleotide variant	NM_015915.5(ATL1):c.1518A>C (p.Val506=)	Hereditary spastic paraplegia 3A [RCV005186617]	likely benign	14	50628429	50628429	Human	1	name
597846186	CV3880587	single nucleotide variant	NM_015915.5(ATL1):c.1410G>A (p.Leu470=)	not provided [RCV005227475]	uncertain significance	14	50628321	50628321	Human		name
598243236	CV3914878	single nucleotide variant	NM_015915.5(ATL1):c.205G>T (p.Ala69Ser)	Inborn genetic diseases [RCV005276669]	uncertain significance	14	50588001	50588001	Human	1	name
8602260	CV39537	single nucleotide variant	NM_015915.5(ATL1):c.196G>C (p.Glu66Gln)	Hereditary spastic paraplegia 3A [RCV000543629]\|Inborn genetic diseases [RCV002415427]\|Neuropathy, hereditary sensory, type 1D [RCV000023543]\|not provided [RCV000236565]	pathogenic\|likely benign\|uncertain significance	14	50587992	50587992	Human	3	name
13490315	CV464290	single nucleotide variant	NM_015915.5(ATL1):c.164G>A (p.Arg55Gln)	Hereditary spastic paraplegia 3A [RCV000533437]\|Inborn genetic diseases [RCV004024173]\|not provided [RCV001755864]	uncertain significance	14	50587960	50587960	Human	2	name
13535239	CV505477	single nucleotide variant	NM_015915.5(ATL1):c.1676A>G (p.Ter559=)	Hereditary spastic paraplegia 3A [RCV003502540]\|not specified [RCV000607630]	likely benign	14	50632338	50632338	Human	1	name
13705586	CV536873	single nucleotide variant	NM_015915.5(ATL1):c.127G>A (p.Asp43Asn)	not provided [RCV000658147]	uncertain significance	14	50587923	50587923	Human		name
13809406	CV568098	single nucleotide variant	NM_015915.5(ATL1):c.163C>T (p.Arg55Trp)	Hereditary spastic paraplegia 3A [RCV000702118]\|Inborn genetic diseases [RCV004669092]\|not provided [RCV003140112]	uncertain significance	14	50587959	50587959	Human	2	name
14700069	CV625307	deletion	NM_015915.5(ATL1):c.976del (p.Val326fs)	Charcot-Marie-Tooth disease [RCV000789725]\|Neuropathy, hereditary sensory, type 1D [RCV000023544]	pathogenic\|uncertain significance	14	50620711	50620711	Human	2	name
14730256	CV642484	single nucleotide variant	NM_015915.5(ATL1):c.176C>T (p.Ser59Leu)	Hereditary spastic paraplegia 3A [RCV000800876]\|Inborn genetic diseases [RCV002397615]	uncertain significance	14	50587972	50587972	Human	2	name
15144401	CV769817	single nucleotide variant	NM_015915.5(ATL1):c.1308T>C (p.Asn436=)	Hereditary spastic paraplegia 3A [RCV001492703]	likely benign	14	50628219	50628219	Human	1	name
15136414	CV784725	single nucleotide variant	NM_015915.5(ATL1):c.1266G>A (p.Glu422=)	Hereditary spastic paraplegia 3A [RCV001481963]	likely benign	14	50628177	50628177	Human	1	name
26893079	CV841541	single nucleotide variant	NM_015915.5(ATL1):c.293A>G (p.Asp98Gly)	Hereditary spastic paraplegia 3A [RCV001068936]	uncertain significance	14	50590951	50590951	Human	1	name
28870818	CV871913	single nucleotide variant	NM_015915.5(ATL1):c.1635A>G (p.Pro545=)	Hereditary spastic paraplegia 3A [RCV001113748]\|Neuropathy, hereditary sensory, type 1D [RCV002260140]	benign	14	50632297	50632297	Human	2	name
8635226	CV90448	single nucleotide variant	NM_001127713.1(ATL1):c.87G>A (p.Val29=)	Malignant melanoma [RCV000070546]	not provided	14	50587883	50587883	Human		name
38459343	CV919529	single nucleotide variant	NM_015915.5(ATL1):c.169C>T (p.Leu57Phe)	Neuropathy, hereditary sensory, type 1D [RCV001195765]	uncertain significance	14	50587965	50587965	Human	1	name
38492320	CV927095	single nucleotide variant	NM_015915.5(ATL1):c.1119G>A (p.Glu373=)	Hereditary spastic paraplegia 3A [RCV001223499]	likely pathogenic	14	50623248	50623248	Human	1	name
127233978	CV977098	single nucleotide variant	NM_015915.5(ATL1):c.118G>T (p.Val40Phe)	Hereditary spastic paraplegia 3A [RCV001391389]	pathogenic	14	50587914	50587914	Human	1	name
126772505	CV1011125	single nucleotide variant	NM_015915.5(ATL1):c.298G>T (p.Val100Phe)	Hereditary spastic paraplegia 3A [RCV001323791]	uncertain significance	14	50590956	50590956	Human	1	name
126753571	CV1011126	single nucleotide variant	NM_015915.5(ATL1):c.716G>A (p.Arg239His)	Hereditary spastic paraplegia 3A [RCV001316506]\|Spastic paraplegia [RCV001731196]	likely pathogenic\|uncertain significance	14	50613344	50613344	Human	3	name
126915490	CV1048571	single nucleotide variant	NM_015915.5(ATL1):c.471G>T (p.Leu157Phe)	Hereditary spastic paraplegia 3A [RCV001360017]	likely pathogenic\|uncertain significance	14	50591588	50591588	Human	1	name
126924328	CV1048572	single nucleotide variant	NM_015915.5(ATL1):c.701A>G (p.Lys234Arg)	Hereditary spastic paraplegia 3A [RCV001366908]\|Inborn genetic diseases [RCV002368186]	uncertain significance	14	50613329	50613329	Human	2	name
127237367	CV1053977	single nucleotide variant	NM_015915.5(ATL1):c.740A>G (p.His247Arg)	Hereditary spastic paraplegia 3A [RCV001376177]	likely pathogenic\|conflicting interpretations of pathogenicity	14	50614389	50614389	Human	1	name
127250670	CV1063108	single nucleotide variant	NM_015915.5(ATL1):c.565C>G (p.His189Asp)	Hereditary spastic paraplegia 3A [RCV001385343]	pathogenic	14	50593888	50593888	Human	1	name
150334799	CV1166103	single nucleotide variant	NM_015915.5(ATL1):c.944T>G (p.Ile315Ser)	not provided [RCV001531189]	likely pathogenic	14	50620680	50620680	Human		name
150419241	CV1194842	single nucleotide variant	NM_015915.5(ATL1):c.766C>G (p.His256Asp)	Hereditary spastic paraplegia 3A [RCV001866014]\|not provided [RCV001569594]	likely pathogenic\|uncertain significance	14	50614415	50614415	Human	1	name
150412136	CV1196116	single nucleotide variant	NM_015915.5(ATL1):c.508A>G (p.Ile170Val)	not provided [RCV001573980]	uncertain significance	14	50591625	50591625	Human		name
150432158	CV1246196	single nucleotide variant	NM_015915.5(ATL1):c.754A>T (p.Asn252Tyr)	not provided [RCV001663609]	uncertain significance	14	50614403	50614403	Human		name
150528682	CV1288442	single nucleotide variant	NM_015915.5(ATL1):c.991G>T (p.Ala331Ser)	not provided [RCV001726910]	uncertain significance	14	50621843	50621843	Human		name
150528104	CV1301628	single nucleotide variant	NM_015915.5(ATL1):c.533T>G (p.Leu178Ter)	not provided [RCV001755000]	uncertain significance	14	50593856	50593856	Human		name
151754487	CV1335943	single nucleotide variant	NM_015915.5(ATL1):c.670G>A (p.Glu224Lys)	Hereditary spastic paraplegia [RCV001848343]	uncertain significance	14	50613298	50613298	Human	1	name
151793108	CV1365528	single nucleotide variant	NM_015915.5(ATL1):c.754A>C (p.Asn252His)	Hereditary spastic paraplegia 3A [RCV001907906]	uncertain significance	14	50614403	50614403	Human	1	name
151786430	CV1365741	single nucleotide variant	NM_015915.5(ATL1):c.544G>A (p.Val182Ile)	Hereditary spastic paraplegia 3A [RCV001893789]	uncertain significance	14	50593867	50593867	Human	1	name
151818355	CV1385077	single nucleotide variant	NM_015915.5(ATL1):c.997A>G (p.Ile333Val)	Hereditary spastic paraplegia 3A [RCV001958165]\|Inborn genetic diseases [RCV004681349]	likely benign\|uncertain significance	14	50621849	50621849	Human	2	name
151807013	CV1441106	single nucleotide variant	NM_015915.5(ATL1):c.391C>T (p.Leu131Phe)	Hereditary spastic paraplegia 3A [RCV001933778]	uncertain significance	14	50591049	50591049	Human	1	name
151823900	CV1458085	single nucleotide variant	NM_015915.5(ATL1):c.773A>T (p.His258Leu)	Hereditary spastic paraplegia 3A [RCV001970209]	pathogenic	14	50614422	50614422	Human	1	name
151718589	CV1468563	single nucleotide variant	NM_015915.5(ATL1):c.482C>T (p.Ala161Val)	Hereditary spastic paraplegia 3A [RCV002030577]	likely pathogenic	14	50591599	50591599	Human	1	name
151724274	CV1482589	single nucleotide variant	NM_015915.5(ATL1):c.568C>T (p.Leu190Phe)	Hereditary spastic paraplegia 3A [RCV002047311]\|not provided [RCV002285507]	uncertain significance	14	50593891	50593891	Human	1	name
151712253	CV1485294	single nucleotide variant	NM_015915.5(ATL1):c.341G>T (p.Gly114Val)	Hereditary spastic paraplegia 3A [RCV002006429]	uncertain significance	14	50590999	50590999	Human	1	name
151808949	CV1506728	single nucleotide variant	NM_015915.5(ATL1):c.409G>T (p.Gly137Cys)	Hereditary spastic paraplegia 3A [RCV001937898]\|Inborn genetic diseases [RCV002324316]	uncertain significance	14	50591067	50591067	Human	2	name
9681764	CV167412	single nucleotide variant	NM_015915.5(ATL1):c.353G>A (p.Arg118Gln)	Hereditary spastic paraplegia 3A [RCV002514782]\|not provided [RCV000144894]	pathogenic\|likely pathogenic\|uncertain significance	14	50591011	50591011	Human	1	name
152982326	CV1677268	single nucleotide variant	NM_015915.5(ATL1):c.466A>C (p.Thr156Pro)	Hereditary spastic paraplegia 3A [RCV002248974]	pathogenic\|likely pathogenic	14	50591583	50591583	Human	1	name
153001184	CV1679933	single nucleotide variant	NM_015915.5(ATL1):c.740A>C (p.His247Pro)	not provided [RCV002251612]	likely pathogenic	14	50614389	50614389	Human		name
153303948	CV1686533	single nucleotide variant	NM_015915.5(ATL1):c.299T>C (p.Val100Ala)	not provided [RCV002261967]	uncertain significance	14	50590957	50590957	Human		name
153301804	CV1687937	single nucleotide variant	NM_015915.5(ATL1):c.628C>A (p.Gln210Lys)	not provided [RCV002265163]	uncertain significance	14	50595630	50595630	Human		name
155697866	CV1778712	single nucleotide variant	NM_015915.5(ATL1):c.412A>G (p.Lys138Glu)	Hereditary spastic paraplegia 3A [RCV002299752]	uncertain significance	14	50591070	50591070	Human	1	name
155715298	CV1784907	single nucleotide variant	NM_015915.5(ATL1):c.308A>G (p.Tyr103Cys)	Hereditary spastic paraplegia 3A [RCV003102304]\|Inborn genetic diseases [RCV002325767]	uncertain significance	14	50590966	50590966	Human	2	name
155740475	CV1809415	single nucleotide variant	NM_015915.5(ATL1):c.499A>G (p.Ser167Gly)	Inborn genetic diseases [RCV002342985]	uncertain significance	14	50591616	50591616	Human	1	name
155747115	CV1816645	single nucleotide variant	NM_015915.5(ATL1):c.788A>G (p.Asn263Ser)	Hereditary spastic paraplegia 3A [RCV003099774]\|Inborn genetic diseases [RCV002416573]	uncertain significance	14	50614437	50614437	Human	2	name
155701778	CV1818446	single nucleotide variant	NM_015915.5(ATL1):c.968G>A (p.Arg323Gln)	Inborn genetic diseases [RCV002376578]	uncertain significance	14	50620704	50620704	Human	1	name
155702702	CV1825381	single nucleotide variant	NM_015915.5(ATL1):c.970G>T (p.Gly324Cys)	Inborn genetic diseases [RCV002376695]	uncertain significance	14	50620706	50620706	Human	1	name
155797592	CV1863392	single nucleotide variant	NM_015915.5(ATL1):c.458G>C (p.Ser153Thr)	Hereditary spastic paraplegia 3A [RCV002470667]	likely pathogenic	14	50591575	50591575	Human	1	name
156176586	CV1874703	single nucleotide variant	NM_015915.5(ATL1):c.916A>G (p.Ser306Gly)	Hereditary spastic paraplegia 3A [RCV003041206]	uncertain significance	14	50620652	50620652	Human	1	name
10045100	CV188852	single nucleotide variant	NM_015915.5(ATL1):c.988A>T (p.Lys330Ter)	Hereditary spastic paraplegia 3A [RCV003987402]\|not provided [RCV000171222]	pathogenic\|likely pathogenic\|no classifications from unflagged records	14	50620724	50620724	Human	1	name
156416825	CV1898238	single nucleotide variant	NM_015915.5(ATL1):c.884A>G (p.Lys295Arg)	Hereditary spastic paraplegia 3A [RCV002610381]\|Inborn genetic diseases [RCV004673805]	uncertain significance	14	50620620	50620620	Human	2	name
155953580	CV1918246	single nucleotide variant	NM_015915.5(ATL1):c.947A>G (p.Asn316Ser)	Hereditary spastic paraplegia 3A [RCV002616355]	uncertain significance	14	50620683	50620683	Human	1	name
156039094	CV1929478	single nucleotide variant	NM_015915.5(ATL1):c.375A>G (p.Ile125Met)	Hereditary spastic paraplegia 3A [RCV002637502]	uncertain significance	14	50591033	50591033	Human	1	name
8596380	CV19385	single nucleotide variant	NM_015915.5(ATL1):c.715C>T (p.Arg239Cys)	Hereditary spastic paraplegia 3A [RCV000004594]\|Hereditary spastic paraplegia 3A [RCV000850530]\|Hereditary spastic paraplegia [RCV001847579]\|Spastic paraplegia [RCV001003978]\|not provided [RCV000215830]	pathogenic\|likely pathogenic	14	50613343	50613343	Human	4	name
8596381	CV19386	single nucleotide variant	NM_015915.5(ATL1):c.776C>A (p.Ser259Tyr)	Hereditary spastic paraplegia 3A [RCV000004595]	pathogenic	14	50614425	50614425	Human	1	name
8596382	CV19387	single nucleotide variant	NM_015915.5(ATL1):c.773A>G (p.His258Arg)	Hereditary spastic paraplegia 3A [RCV000004596]	pathogenic	14	50614422	50614422	Human	1	name
8596383	CV19388	single nucleotide variant	NM_015915.5(ATL1):c.650G>A (p.Arg217Gln)	Hereditary spastic paraplegia 3A [RCV000004597]\|not provided [RCV001725929]	pathogenic\|likely pathogenic	14	50613278	50613278	Human	1	name
8596386	CV19392	single nucleotide variant	NM_015915.5(ATL1):c.470T>G (p.Leu157Trp)	Hereditary spastic paraplegia 3A [RCV000004601]	pathogenic	14	50591587	50591587	Human	1	name
156244079	CV1956857	single nucleotide variant	NM_015915.5(ATL1):c.864A>C (p.Glu288Asp)	Hereditary spastic paraplegia 3A [RCV002576320]	uncertain significance	14	50620600	50620600	Human	1	name
156290788	CV1998021	single nucleotide variant	NM_015915.5(ATL1):c.875A>G (p.Glu292Gly)	Hereditary spastic paraplegia 3A [RCV002670757]	uncertain significance	14	50620611	50620611	Human	1	name
156222381	CV2009236	single nucleotide variant	NM_015915.5(ATL1):c.898C>A (p.Leu300Met)	Hereditary spastic paraplegia 3A [RCV002701054]\|not provided [RCV003443071]	uncertain significance	14	50620634	50620634	Human	1	name
156202127	CV2034782	single nucleotide variant	NM_015915.5(ATL1):c.741T>G (p.His247Gln)	Hereditary spastic paraplegia 3A [RCV002766278]	uncertain significance	14	50614390	50614390	Human	1	name
156285502	CV2050153	single nucleotide variant	NM_015915.5(ATL1):c.584A>C (p.Glu195Ala)	Hereditary spastic paraplegia 3A [RCV002807138]	pathogenic	14	50595586	50595586	Human	1	name
10401322	CV205019	single nucleotide variant	NM_015915.5(ATL1):c.596T>A (p.Leu199Gln)	Hereditary spastic paraplegia 3A [RCV000190502]	pathogenic	14	50595598	50595598	Human	1	name
156111131	CV2121164	single nucleotide variant	NM_015915.5(ATL1):c.710A>G (p.Glu237Gly)	Hereditary spastic paraplegia 3A [RCV002953119]	uncertain significance	14	50613338	50613338	Human	1	name
156055136	CV2192659	single nucleotide variant	NM_015915.5(ATL1):c.412A>T (p.Lys138Ter)	not provided [RCV003037049]	uncertain significance	14	50591070	50591070	Human		name
10768241	CV222372	single nucleotide variant	NM_015915.5(ATL1):c.757G>A (p.Val253Ile)	Hereditary spastic paraplegia 3A [RCV000206078]\|Hereditary spastic paraplegia [RCV001847933]\|not provided [RCV000235294]	pathogenic\|likely pathogenic	14	50614406	50614406	Human	2	name
155993226	CV2252198	single nucleotide variant	NM_015915.5(ATL1):c.304G>C (p.Asp102His)	Inborn genetic diseases [RCV002778730]	uncertain significance	14	50590962	50590962	Human	1	name
243063645	CV2411922	single nucleotide variant	NM_015915.5(ATL1):c.713A>G (p.Lys238Arg)	not provided [RCV003141646]	uncertain significance	14	50613341	50613341	Human		name
11523390	CV244919	single nucleotide variant	NM_015915.5(ATL1):c.416A>G (p.Lys139Arg)	not provided [RCV000235824]	uncertain significance	14	50591074	50591074	Human		name
11633172	CV264598	single nucleotide variant	NM_015915.5(ATL1):c.478T>C (p.Ser160Pro)	Hereditary spastic paraplegia 3A [RCV000705284]\|not provided [RCV000316265]	pathogenic\|uncertain significance	14	50591595	50591595	Human	1	name
329848354	CV2668001	single nucleotide variant	NM_015915.5(ATL1):c.656G>A (p.Trp219Ter)	Hereditary spastic paraplegia [RCV003229541]	likely pathogenic	14	50613284	50613284	Human	1	name
329953886	CV2669225	single nucleotide variant	NM_015915.5(ATL1):c.757G>T (p.Val253Phe)	Hereditary spastic paraplegia 3A [RCV003502715]\|not provided [RCV003231729]	likely pathogenic\|uncertain significance	14	50614406	50614406	Human	1	name
401724115	CV2672222	single nucleotide variant	NM_015915.5(ATL1):c.845T>G (p.Phe282Cys)	not provided [RCV003239123]	uncertain significance	14	50614494	50614494	Human		name
401727681	CV2736469	duplication	NM_015915.5(ATL1):c.1474dup (p.Ala492fs)	Hereditary spastic paraplegia 3A [RCV003312917]	uncertain significance	14	50628382	50628383	Human	1	name
401727682	CV2736470	duplication	NM_015915.5(ATL1):c.1504dup (p.Glu502fs)	Hereditary spastic paraplegia 3A [RCV003312918]	uncertain significance	14	50628414	50628415	Human	1	name
401727684	CV2736471	single nucleotide variant	NM_015915.5(ATL1):c.452T>C (p.Phe151Ser)	Hereditary spastic paraplegia 3A [RCV003312919]	uncertain significance	14	50591569	50591569	Human	1	name
401727685	CV2736472	single nucleotide variant	NM_015915.5(ATL1):c.460C>G (p.Gln154Glu)	Hereditary spastic paraplegia 3A [RCV003312920]	uncertain significance	14	50591577	50591577	Human	1	name
401828694	CV2743029	single nucleotide variant	NM_015915.5(ATL1):c.404C>T (p.Pro135Leu)	not provided [RCV003325737]	uncertain significance	14	50591062	50591062	Human		name
401829269	CV2743715	single nucleotide variant	NM_015915.5(ATL1):c.439A>T (p.Thr147Ser)	not provided [RCV003326891]	uncertain significance	14	50591556	50591556	Human		name
401940518	CV2839497	single nucleotide variant	NM_015915.5(ATL1):c.709G>A (p.Glu237Lys)	Hereditary spastic paraplegia 3A [RCV003455853]	uncertain significance	14	50613337	50613337	Human	1	name
404988773	CV2849662	single nucleotide variant	NM_015915.5(ATL1):c.602T>C (p.Met201Thr)	not provided [RCV003490489]	uncertain significance	14	50595604	50595604	Human		name
405065509	CV2938179	single nucleotide variant	NM_015915.5(ATL1):c.421G>T (p.Ala141Ser)	Hereditary spastic paraplegia 3A [RCV003611768]	uncertain significance	14	50591538	50591538	Human	1	name
405077937	CV2965328	single nucleotide variant	NM_015915.5(ATL1):c.763A>G (p.Lys255Glu)	Hereditary spastic paraplegia 3A [RCV003612648]	uncertain significance	14	50614412	50614412	Human	1	name
405078250	CV2976125	single nucleotide variant	NM_015915.5(ATL1):c.583G>A (p.Glu195Lys)	Hereditary spastic paraplegia 3A [RCV003612676]	uncertain significance	14	50595585	50595585	Human	1	name
405078792	CV2984025	single nucleotide variant	NM_015915.5(ATL1):c.574C>G (p.Leu192Val)	Hereditary spastic paraplegia 3A [RCV003612723]\|not provided [RCV004823177]	pathogenic\|uncertain significance	14	50595576	50595576	Human	1	name
405081571	CV2998075	single nucleotide variant	NM_015915.5(ATL1):c.317C>G (p.Pro106Arg)	Hereditary spastic paraplegia 3A [RCV003612969]	uncertain significance	14	50590975	50590975	Human	1	name
405084249	CV3000846	single nucleotide variant	NM_015915.5(ATL1):c.574C>A (p.Leu192Ile)	Hereditary spastic paraplegia 3A [RCV003613197]	uncertain significance	14	50595576	50595576	Human	1	name
405057445	CV3022978	single nucleotide variant	NM_015915.5(ATL1):c.463T>C (p.Ser155Pro)	Hereditary spastic paraplegia 3A [RCV003611027]	uncertain significance	14	50591580	50591580	Human	1	name
405088224	CV3028890	single nucleotide variant	NM_015915.5(ATL1):c.336G>A (p.Trp112Ter)	Hereditary spastic paraplegia 3A [RCV003613515]	pathogenic	14	50590994	50590994	Human	1	name
405291092	CV3222199	single nucleotide variant	NM_015915.5(ATL1):c.749T>G (p.Leu250Arg)	Hereditary spastic paraplegia 3A [RCV003985013]	not provided	14	50614398	50614398	Human		name
405701213	CV3279957	single nucleotide variant	NM_015915.5(ATL1):c.509T>C (p.Ile170Thr)	Inborn genetic diseases [RCV004425439]	uncertain significance	14	50591626	50591626	Human	1	name
11626057	CV329463	single nucleotide variant	NM_015915.5(ATL1):c.622C>T (p.Pro208Ser)	ATL1-related disorder [RCV003409489]\|Hereditary spastic paraplegia 3A [RCV000406065]\|Inborn genetic diseases [RCV002365364]\|not provided [RCV000428652]	conflicting interpretations of pathogenicity\|uncertain significance	14	50595624	50595624	Human	2	name , trait , alternate_id
407429098	CV3413485	single nucleotide variant	NM_015915.5(ATL1):c.701A>T (p.Lys234Ile)	Hereditary spastic paraplegia 3A [RCV004594893]	uncertain significance	14	50613329	50613329	Human	1	name
8566970	CV34380	duplication	NM_015915.5(ATL1):c.1519dup (p.Ile507fs)	Hereditary spastic paraplegia 3A [RCV000020718]	pathogenic\|conflicting interpretations of pathogenicity	14	50628428	50628429	Human	1	name
8601221	CV34383	single nucleotide variant	NM_015915.5(ATL1):c.467C>T (p.Thr156Ile)	Hereditary spastic paraplegia 3A [RCV000020721]\|not provided [RCV000713455]	pathogenic	14	50591584	50591584	Human	1	name
8601222	CV34384	single nucleotide variant	NM_015915.5(ATL1):c.578T>G (p.Phe193Cys)	Hereditary spastic paraplegia 3A [RCV000020722]	benign\|not provided	14	50595580	50595580	Human	1	name
407504787	CV3485158	single nucleotide variant	NM_015915.5(ATL1):c.311A>T (p.Asn104Ile)	Inborn genetic diseases [RCV004670649]	uncertain significance	14	50590969	50590969	Human	1	name
407505065	CV3485169	single nucleotide variant	NM_015915.5(ATL1):c.955A>C (p.Lys319Gln)	Inborn genetic diseases [RCV004670658]	uncertain significance	14	50620691	50620691	Human	1	name
407505010	CV3485200	single nucleotide variant	NM_015915.5(ATL1):c.959T>C (p.Ile320Thr)	Inborn genetic diseases [RCV004670678]	uncertain significance	14	50620695	50620695	Human	1	name
408391144	CV3527905	single nucleotide variant	NM_015915.5(ATL1):c.680A>G (p.Tyr227Cys)	not provided [RCV004775176]\|not specified [RCV005061403]	uncertain significance	14	50613308	50613308	Human		name
597626988	CV3599908	single nucleotide variant	NM_015915.5(ATL1):c.843C>G (p.Asn281Lys)	Inborn genetic diseases [RCV004966302]	uncertain significance	14	50614492	50614492	Human	1	name
597676193	CV3710805	single nucleotide variant	NM_015915.5(ATL1):c.940G>T (p.Glu314Ter)	Hereditary spastic paraplegia 3A [RCV005005637]	likely pathogenic	14	50620676	50620676	Human	1	name
12843167	CV373858	single nucleotide variant	NM_015915.5(ATL1):c.322A>G (p.Thr108Ala)	Hereditary spastic paraplegia 3A [RCV000647937]\|Inborn genetic diseases [RCV002446648]\|not provided [RCV001702364]	likely benign\|conflicting interpretations of pathogenicity\|uncertain significance	14	50590980	50590980	Human	2	name
597932599	CV3742653	single nucleotide variant	NM_015915.5(ATL1):c.349G>C (p.Glu117Gln)	Hereditary spastic paraplegia 3A [RCV005076092]	uncertain significance	14	50591007	50591007	Human	1	name
597936727	CV3774564	single nucleotide variant	NM_015915.5(ATL1):c.924G>C (p.Glu308Asp)	Hereditary spastic paraplegia 3A [RCV005117597]	uncertain significance	14	50620660	50620660	Human	1	name
597944527	CV3793747	single nucleotide variant	NM_015915.5(ATL1):c.757G>C (p.Val253Leu)	Hereditary spastic paraplegia 3A [RCV005134387]	uncertain significance	14	50614406	50614406	Human	1	name
597958745	CV3797334	single nucleotide variant	NM_015915.5(ATL1):c.417G>T (p.Lys139Asn)	Hereditary spastic paraplegia 3A [RCV005138021]	uncertain significance	14	50591075	50591075	Human	1	name
597944092	CV3812454	single nucleotide variant	NM_015915.5(ATL1):c.995A>C (p.Tyr332Ser)	Hereditary spastic paraplegia 3A [RCV005159664]	uncertain significance	14	50621847	50621847	Human	1	name
597959665	CV3843424	single nucleotide variant	NM_015915.5(ATL1):c.935T>C (p.Ile312Thr)	Hereditary spastic paraplegia 3A [RCV005192459]	uncertain significance	14	50620671	50620671	Human	1	name
597906474	CV3853460	single nucleotide variant	NM_015915.5(ATL1):c.773A>C (p.His258Pro)	Hereditary spastic paraplegia 3A [RCV005202938]	uncertain significance	14	50614422	50614422	Human	1	name
598218188	CV3891630	single nucleotide variant	NM_015915.5(ATL1):c.766C>A (p.His256Asn)	Hereditary spastic paraplegia 3A [RCV005252472]\|not provided [RCV005410051]	uncertain significance	14	50614415	50614415	Human	1	name
598243197	CV3914870	single nucleotide variant	NM_015915.5(ATL1):c.907T>C (p.Trp303Arg)	Inborn genetic diseases [RCV005276661]	uncertain significance	14	50620643	50620643	Human	1	name
598243270	CV3914886	single nucleotide variant	NM_015915.5(ATL1):c.965G>C (p.Cys322Ser)	Inborn genetic diseases [RCV005276676]	uncertain significance	14	50620701	50620701	Human	1	name
12887904	CV399833	single nucleotide variant	NM_015915.5(ATL1):c.461A>G (p.Gln154Arg)	Abnormal pyramidal sign [RCV001526629]\|Hereditary spastic paraplegia 3A [RCV000469923]	likely pathogenic\|conflicting interpretations of pathogenicity\|uncertain significance	14	50591578	50591578	Human	2	name
12906011	CV413376	single nucleotide variant	NM_015915.5(ATL1):c.922G>A (p.Glu308Lys)	Hereditary spastic paraplegia 3A [RCV001856884]\|Neuropathy, hereditary sensory, type 1D [RCV001334885]\|not provided [RCV000488307]	likely benign\|uncertain significance	14	50620658	50620658	Human	2	name
13446400	CV437968	single nucleotide variant	NM_015915.5(ATL1):c.688G>A (p.Asp230Asn)	Hereditary spastic paraplegia 3A [RCV001346950]\|Inborn genetic diseases [RCV002367703]\|Neuropathy, hereditary sensory, type 1D [RCV001706655]\|not provided [RCV000513662]	uncertain significance	14	50613316	50613316	Human	3	name
13481549	CV441647	single nucleotide variant	NM_015915.5(ATL1):c.481G>T (p.Ala161Ser)	Hereditary spastic paraplegia 3A [RCV000802695]\|not specified [RCV000517609]	likely pathogenic\|uncertain significance	14	50591598	50591598	Human	1	name
13471157	CV441648	single nucleotide variant	NM_015915.5(ATL1):c.563A>G (p.Gln188Arg)	not provided [RCV000518489]	likely pathogenic	14	50593886	50593886	Human		name
13485984	CV445234	single nucleotide variant	NM_015915.5(ATL1):c.311A>G (p.Asn104Ser)	Hereditary spastic paraplegia 3A [RCV000536617]\|not provided [RCV000522762]	conflicting interpretations of pathogenicity\|uncertain significance	14	50590969	50590969	Human	1	name
13477682	CV445235	single nucleotide variant	NM_015915.5(ATL1):c.587A>G (p.Tyr196Cys)	Hereditary spastic paraplegia 3A [RCV001320969]\|not provided [RCV000520465]	pathogenic\|likely pathogenic\|uncertain significance	14	50595589	50595589	Human	1	name
13494406	CV463801	single nucleotide variant	NM_015915.5(ATL1):c.594A>C (p.Arg198Ser)	Hereditary spastic paraplegia 3A [RCV000536383]	likely pathogenic\|uncertain significance	14	50595596	50595596	Human	1	name
13472402	CV464298	single nucleotide variant	NM_015915.5(ATL1):c.874G>A (p.Glu292Lys)	Hereditary spastic paraplegia 3A [RCV000524891]	uncertain significance	14	50620610	50620610	Human	1	name
13499027	CV464300	single nucleotide variant	NM_015915.5(ATL1):c.953A>T (p.Asn318Ile)	Hereditary spastic paraplegia 3A [RCV000539569]\|Inborn genetic diseases [RCV002530064]\|not provided [RCV003235284]	uncertain significance	14	50620689	50620689	Human	2	name
13620972	CV528195	single nucleotide variant	NM_015915.5(ATL1):c.769A>G (p.Ile257Val)	Hereditary spastic paraplegia 3A [RCV000647929]	uncertain significance	14	50614418	50614418	Human	1	name
13620985	CV528559	single nucleotide variant	NM_015915.5(ATL1):c.306C>A (p.Asp102Glu)	Hereditary spastic paraplegia 3A [RCV000647939]\|Inborn genetic diseases [RCV002449065]\|Neuropathy, hereditary sensory, type 1D [RCV002260039]\|not provided [RCV001653968]	benign\|likely benign	14	50590964	50590964	Human	3	name
13620978	CV528565	single nucleotide variant	NM_015915.5(ATL1):c.536C>A (p.Ser179Tyr)	Hereditary spastic paraplegia 3A [RCV000647934]\|not provided [RCV003480737]	likely pathogenic\|uncertain significance	14	50593859	50593859	Human	1	name
13802608	CV566492	single nucleotide variant	NM_015915.5(ATL1):c.572A>G (p.Gln191Arg)	Hereditary spastic paraplegia 3A [RCV000698465]	pathogenic\|likely pathogenic\|uncertain significance	14	50593895	50593895	Human	1	name
13807099	CV568101	single nucleotide variant	NM_015915.5(ATL1):c.373A>G (p.Ile125Val)	Hereditary spastic paraplegia 3A [RCV000700886]	uncertain significance	14	50591031	50591031	Human	1	name
14396325	CV612099	deletion	NM_015915.5(ATL1):c.1511del (p.Gly504fs)	Hereditary spastic paraplegia 3A [RCV000761255]	likely pathogenic	14	50628420	50628420	Human	1	name
14396816	CV612987	single nucleotide variant	NM_015915.5(ATL1):c.547C>G (p.Gln183Glu)	not provided [RCV000761873]	uncertain significance	14	50593870	50593870	Human		name
14704300	CV626229	duplication	NM_015915.5(ATL1):c.1111dup (p.Met371fs)	Neuropathy, hereditary sensory, type 1D [RCV000791019]	likely pathogenic	14	50623233	50623234	Human	1	name
14707244	CV642485	single nucleotide variant	NM_015915.5(ATL1):c.388T>C (p.Phe130Leu)	Hereditary spastic paraplegia 3A [RCV000792266]\|Inborn genetic diseases [RCV002352309]	uncertain significance	14	50591046	50591046	Human	2	name
14724244	CV642486	single nucleotide variant	NM_015915.5(ATL1):c.540A>C (p.Gln180His)	Hereditary spastic paraplegia 3A [RCV000798317]	uncertain significance	14	50593863	50593863	Human	1	name
14734121	CV642487	single nucleotide variant	NM_015915.5(ATL1):c.756C>A (p.Asn252Lys)	Hereditary spastic paraplegia 3A [RCV000818981]	uncertain significance	14	50614405	50614405	Human	1	name
21072587	CV791410	single nucleotide variant	NM_015915.5(ATL1):c.488T>C (p.Val163Ala)	Hereditary spastic paraplegia 3A [RCV000989218]\|not provided [RCV001580004]	pathogenic\|likely pathogenic	14	50591605	50591605	Human	1	name
26885717	CV841542	single nucleotide variant	NM_015915.5(ATL1):c.716G>T (p.Arg239Leu)	Hereditary spastic paraplegia 3A [RCV001065616]	pathogenic\|likely pathogenic	14	50613344	50613344	Human	1	name
26903382	CV841543	single nucleotide variant	NM_015915.5(ATL1):c.860A>G (p.Lys287Arg)	Hereditary spastic paraplegia 3A [RCV001050443]	uncertain significance	14	50614509	50614509	Human	1	name
26896949	CV841544	single nucleotide variant	NM_015915.5(ATL1):c.918T>G (p.Ser306Arg)	Hereditary spastic paraplegia 3A [RCV001048303]	uncertain significance	14	50620654	50620654	Human	1	name
28877905	CV860107	single nucleotide variant	NM_015915.5(ATL1):c.543T>A (p.Asn181Lys)	not provided [RCV001090530]	uncertain significance	14	50593866	50593866	Human		name
38462275	CV919530	single nucleotide variant	NM_015915.5(ATL1):c.833C>T (p.Thr278Ile)	Neuropathy, hereditary sensory, type 1D [RCV001198355]	uncertain significance	14	50614482	50614482	Human	1	name
38468350	CV920874	single nucleotide variant	NM_015915.5(ATL1):c.564G>T (p.Gln188His)	not provided [RCV001200590]	uncertain significance	14	50593887	50593887	Human		name
38484569	CV927093	single nucleotide variant	NM_015915.5(ATL1):c.686C>G (p.Ala229Gly)	Hereditary spastic paraplegia 3A [RCV001219488]\|Inborn genetic diseases [RCV002365992]\|not provided [RCV001288451]	uncertain significance	14	50613314	50613314	Human	2	name
38489015	CV927094	single nucleotide variant	NM_015915.5(ATL1):c.776C>T (p.Ser259Phe)	Hereditary spastic paraplegia 3A [RCV001221487]\|not provided [RCV001268896]	pathogenic\|conflicting interpretations of pathogenicity	14	50614425	50614425	Human	1	name
38476577	CV936633	single nucleotide variant	NM_015915.5(ATL1):c.473G>T (p.Arg158Ile)	Hereditary spastic paraplegia 3A [RCV001204748]	uncertain significance	14	50591590	50591590	Human	1	name
38458564	CV936634	single nucleotide variant	NM_015915.5(ATL1):c.971G>A (p.Gly324Asp)	Hereditary spastic paraplegia 3A [RCV001211444]	uncertain significance	14	50620707	50620707	Human	1	name
38494201	CV957231	single nucleotide variant	NM_015915.5(ATL1):c.598G>A (p.Ala200Thr)	Hereditary spastic paraplegia 3A [RCV001240910]	uncertain significance	14	50595600	50595600	Human	1	name
38598089	CV963167	single nucleotide variant	NM_015915.5(ATL1):c.574C>T (p.Leu192Phe)	Hereditary spastic paraplegia 3A [RCV001251114]	likely pathogenic	14	50595576	50595576	Human	1	name
40889894	CV975391	single nucleotide variant	NM_015915.5(ATL1):c.352C>T (p.Arg118Ter)	not provided [RCV001268399]	pathogenic	14	50591010	50591010	Human		name
127233981	CV977099	single nucleotide variant	NM_015915.5(ATL1):c.470T>C (p.Leu157Ser)	Hereditary spastic paraplegia 3A [RCV001391390]	pathogenic	14	50591587	50591587	Human	1	name
127233986	CV977100	single nucleotide variant	NM_015915.5(ATL1):c.575T>A (p.Leu192His)	Hereditary spastic paraplegia 3A [RCV001391391]	pathogenic	14	50595577	50595577	Human	1	name
127233987	CV977101	single nucleotide variant	NM_015915.5(ATL1):c.749T>C (p.Leu250Pro)	Hereditary spastic paraplegia 3A [RCV001391392]	pathogenic	14	50614398	50614398	Human	1	name
127233991	CV977102	single nucleotide variant	NM_015915.5(ATL1):c.751C>A (p.Gln251Lys)	Hereditary spastic paraplegia 3A [RCV001391393]	pathogenic\|conflicting interpretations of pathogenicity	14	50614400	50614400	Human	1	name
127233995	CV977104	deletion	NM_015915.5(ATL1):c.1207del (p.Arg403fs)	Hereditary spastic paraplegia 3A [RCV001391395]	pathogenic	14	50628117	50628117	Human	1	name
126731193	CV995863	single nucleotide variant	NM_015915.5(ATL1):c.731G>T (p.Gly244Val)	Hereditary spastic paraplegia 3A [RCV001294337]	uncertain significance	14	50614380	50614380	Human	1	name
126751799	CV1011127	single nucleotide variant	NM_015915.5(ATL1):c.1360G>C (p.Val454Leu)	Hereditary spastic paraplegia 3A [RCV001316182]\|Inborn genetic diseases [RCV002384399]\|not provided [RCV001751606]	uncertain significance	14	50628271	50628271	Human	2	name
126765463	CV1031624	single nucleotide variant	NM_015915.5(ATL1):c.1511G>A (p.Gly504Glu)	Hereditary spastic paraplegia 3A [RCV001342040]	uncertain significance	14	50628422	50628422	Human	1	name
126763930	CV1031625	single nucleotide variant	NM_015915.5(ATL1):c.1638G>C (p.Lys546Asn)	Hereditary spastic paraplegia 3A [RCV001341468]	uncertain significance	14	50632300	50632300	Human	1	name
127258561	CV1056171	single nucleotide variant	NM_015915.5(ATL1):c.1048G>T (p.Ala350Ser)	Hereditary spastic paraplegia 3A [RCV001379963]	likely pathogenic	14	50623177	50623177	Human	1	name
127257122	CV1056172	single nucleotide variant	NM_015915.5(ATL1):c.1216A>C (p.Lys406Gln)	Accessory ectopic thyroid tissue [RCV001849513]\|Hereditary spastic paraplegia 3A [RCV001379692]	likely pathogenic\|uncertain significance	14	50628127	50628127	Human	2	name
151349261	CV1170287	single nucleotide variant	NM_015915.5(ATL1):c.1225G>A (p.Gly409Ser)	Abnormality of the nervous system [RCV001814486]	likely pathogenic	14	50628136	50628136	Human	2	name
150405263	CV1191585	single nucleotide variant	NM_015915.5(ATL1):c.1051A>G (p.Thr351Ala)	Hereditary spastic paraplegia 3A [RCV002568431]\|not provided [RCV001564203]	likely pathogenic\|uncertain significance	14	50623180	50623180	Human	1	name
150481938	CV1265700	single nucleotide variant	NM_015915.5(ATL1):c.1501C>T (p.Arg501Ter)	ATL1-related spastic paraplegia, recessive [RCV005253870]\|not provided [RCV001682696]	pathogenic	14	50628412	50628412	Human		name , trait
150495554	CV1282983	insertion	NM_015915.5(ATL1):c.1552-68_1552-67insATA	Hereditary spastic paraplegia 3A [RCV002260389]\|Neuropathy, hereditary sensory, type 1D [RCV002260390]\|not provided [RCV001717405]	benign	14	50629926	50629927	Human	2	name
150551432	CV1292708	single nucleotide variant	NM_015915.5(ATL1):c.1346C>A (p.Ala449Asp)	not provided [RCV001754316]	likely pathogenic\|uncertain significance	14	50628257	50628257	Human		name
151351791	CV1323635	single nucleotide variant	NM_015915.5(ATL1):c.1061C>T (p.Ala354Val)	See cases [RCV004584447]	uncertain significance	14	50623190	50623190	Human		name
151353173	CV1326118	single nucleotide variant	NM_015915.5(ATL1):c.1242C>G (p.Ser414Arg)	not provided [RCV001816138]	likely pathogenic	14	50628153	50628153	Human		name
151733532	CV1336579	single nucleotide variant	NM_015915.5(ATL1):c.1049C>T (p.Ala350Val)	Lingual thyroid [RCV001849809]	uncertain significance	14	50623178	50623178	Human	2	name
151710228	CV1338846	single nucleotide variant	NM_015915.5(ATL1):c.1574A>G (p.Tyr525Cys)	Hereditary spastic paraplegia 3A [RCV001997381]\|Inborn genetic diseases [RCV004043903]	uncertain significance	14	50632236	50632236	Human	2	name
151724839	CV1350614	single nucleotide variant	NM_015915.5(ATL1):c.1460C>T (p.Thr487Ile)	Hereditary spastic paraplegia 3A [RCV002048916]	uncertain significance	14	50628371	50628371	Human	1	name
151715139	CV1351593	single nucleotide variant	NM_015915.5(ATL1):c.1502G>A (p.Arg501Gln)	Hereditary spastic paraplegia 3A [RCV002018912]	uncertain significance	14	50628413	50628413	Human	1	name
151812481	CV1361565	single nucleotide variant	NM_015915.5(ATL1):c.1256A>T (p.Gln419Leu)	Hereditary spastic paraplegia 3A [RCV001945080]	uncertain significance	14	50628167	50628167	Human	1	name
151821544	CV1379637	single nucleotide variant	NM_015915.5(ATL1):c.1514C>G (p.Ala505Gly)	Hereditary spastic paraplegia 3A [RCV001964851]	uncertain significance	14	50628425	50628425	Human	1	name
151777049	CV1430839	single nucleotide variant	NM_015915.5(ATL1):c.1501C>G (p.Arg501Gly)	Hereditary spastic paraplegia 3A [RCV001877330]	uncertain significance	14	50628412	50628412	Human	1	name
151720182	CV1437155	single nucleotide variant	NM_015915.5(ATL1):c.1263G>C (p.Leu421Phe)	Hereditary spastic paraplegia 3A [RCV002035784]	uncertain significance	14	50628174	50628174	Human	1	name
151808254	CV1457636	single nucleotide variant	NM_015915.5(ATL1):c.1631C>T (p.Thr544Ile)	Hereditary spastic paraplegia 3A [RCV001936422]	uncertain significance	14	50632293	50632293	Human	1	name
151711107	CV1472029	single nucleotide variant	NM_015915.5(ATL1):c.1640C>T (p.Ser547Leu)	Hereditary spastic paraplegia 3A [RCV002000917]	uncertain significance	14	50632302	50632302	Human	1	name
151790766	CV1483958	single nucleotide variant	NM_015915.5(ATL1):c.1663A>G (p.Lys555Glu)	Hereditary spastic paraplegia 3A [RCV001903600]	uncertain significance	14	50632325	50632325	Human	1	name
151807764	CV1493424	single nucleotide variant	NM_015915.5(ATL1):c.1191A>C (p.Glu397Asp)	Hereditary spastic paraplegia 3A [RCV001935360]	uncertain significance	14	50628102	50628102	Human	1	name
151717650	CV1495586	single nucleotide variant	NM_015915.5(ATL1):c.1323C>G (p.Ile441Met)	Hereditary spastic paraplegia 3A [RCV002026877]	uncertain significance	14	50628234	50628234	Human	1	name
151770602	CV1512828	single nucleotide variant	NM_015915.5(ATL1):c.1519A>G (p.Ile507Val)	Hereditary spastic paraplegia 3A [RCV001866802]\|Inborn genetic diseases [RCV003375376]\|not provided [RCV005001242]	uncertain significance	14	50628430	50628430	Human	2	name
152980657	CV1676042	single nucleotide variant	NM_015915.5(ATL1):c.1288A>C (p.Ile430Leu)	Hereditary spastic paraplegia 3A [RCV003101322]\|not provided [RCV002245111]	uncertain significance	14	50628199	50628199	Human	1	name
152999470	CV1679825	single nucleotide variant	NM_015915.5(ATL1):c.1027C>G (p.His343Asp)	Hereditary spastic paraplegia 3A [RCV002251214]	uncertain significance	14	50621879	50621879	Human	1	name
153304589	CV1687151	single nucleotide variant	NM_015915.5(ATL1):c.1556G>C (p.Ser519Thr)	not provided [RCV002262439]	uncertain significance	14	50629999	50629999	Human		name
153348427	CV1692464	single nucleotide variant	NM_015915.5(ATL1):c.1018G>A (p.Glu340Lys)	Neurodevelopmental delay [RCV002274317]	likely pathogenic	14	50621870	50621870	Human	1	name
153348428	CV1692465	single nucleotide variant	NM_015915.5(ATL1):c.1031C>A (p.Pro344His)	Neurodevelopmental delay [RCV002274318]	likely pathogenic	14	50621883	50621883	Human	1	name
155266733	CV1699291	single nucleotide variant	NM_015915.5(ATL1):c.1508T>C (p.Leu503Pro)	not provided [RCV002283086]	uncertain significance	14	50628419	50628419	Human		name
155643482	CV1707867	single nucleotide variant	NM_015915.5(ATL1):c.1358T>C (p.Val453Ala)	Hereditary spastic paraplegia 3A [RCV002289328]	uncertain significance	14	50628269	50628269	Human	1	name
155666570	CV1773384	single nucleotide variant	NM_015915.5(ATL1):c.1070T>C (p.Leu357Ser)	ATL1-related disorder [RCV003403782]\|Hereditary spastic paraplegia 3A [RCV002297096]	uncertain significance	14	50623199	50623199	Human	1	name , trait , alternate_id
155672082	CV1773978	single nucleotide variant	NM_015915.5(ATL1):c.1674G>A (p.Met558Ile)	Hereditary spastic paraplegia 3A [RCV002297548]	uncertain significance	14	50632336	50632336	Human	1	name
155742997	CV1777459	single nucleotide variant	NM_015915.5(ATL1):c.1673T>G (p.Met558Arg)	Hereditary spastic paraplegia 3A [RCV002302960]	uncertain significance	14	50632335	50632335	Human	1	name
155714510	CV1815311	single nucleotide variant	NM_015915.5(ATL1):c.1232A>C (p.Glu411Ala)	Inborn genetic diseases [RCV002362133]	uncertain significance	14	50628143	50628143	Human	1	name
155720361	CV1830730	single nucleotide variant	NM_015915.5(ATL1):c.1572G>C (p.Leu524Phe)	Hereditary spastic paraplegia 3A [RCV003774391]\|Inborn genetic diseases [RCV002405673]	uncertain significance	14	50632234	50632234	Human	2	name
155702577	CV1837659	single nucleotide variant	NM_015915.5(ATL1):c.1612T>A (p.Tyr538Asn)	Hereditary spastic paraplegia 3A [RCV003611608]\|Inborn genetic diseases [RCV002394847]	uncertain significance	14	50632274	50632274	Human	2	name
155671849	CV1852230	single nucleotide variant	NM_015915.5(ATL1):c.1109A>G (p.Lys370Arg)	Inborn genetic diseases [RCV002437275]	uncertain significance	14	50623238	50623238	Human	1	name
155795447	CV1861305	single nucleotide variant	NM_015915.5(ATL1):c.1445G>T (p.Gly482Val)	not provided [RCV002469587]	uncertain significance	14	50628356	50628356	Human		name
156330142	CV1884302	single nucleotide variant	NM_015915.5(ATL1):c.1309G>A (p.Asp437Asn)	Hereditary spastic paraplegia 3A [RCV003089743]	uncertain significance	14	50628220	50628220	Human	1	name
156412005	CV1890263	single nucleotide variant	NM_015915.5(ATL1):c.1336C>T (p.Arg446Cys)	Hereditary spastic paraplegia 3A [RCV003072717]	uncertain significance	14	50628247	50628247	Human	1	name
156204931	CV1913103	single nucleotide variant	NM_015915.5(ATL1):c.1267A>G (p.Ser423Gly)	Hereditary spastic paraplegia 3A [RCV002595845]	uncertain significance	14	50628178	50628178	Human	1	name
156304435	CV1916326	single nucleotide variant	NM_015915.5(ATL1):c.1484G>A (p.Arg495Gln)	Hereditary spastic paraplegia 3A [RCV002599329]\|not provided [RCV005098907]	likely pathogenic\|uncertain significance	14	50628395	50628395	Human	1	name
8596384	CV19390	single nucleotide variant	NM_015915.5(ATL1):c.1222A>G (p.Met408Val)	Hereditary spastic paraplegia 3A [RCV000004599]	pathogenic\|likely pathogenic	14	50628133	50628133	Human	1	name
8596385	CV19391	single nucleotide variant	NM_015915.5(ATL1):c.1243C>T (p.Arg415Trp)	Hereditary spastic paraplegia 3A [RCV000004600]\|Inborn genetic diseases [RCV000190652]\|not provided [RCV001090532]	pathogenic\|likely pathogenic	14	50628154	50628154	Human	2	name
156285006	CV1964546	single nucleotide variant	NM_015915.5(ATL1):c.1639T>G (p.Ser547Ala)	Hereditary spastic paraplegia 3A [RCV002577605]	uncertain significance	14	50632301	50632301	Human	1	name
156417448	CV1966958	single nucleotide variant	NM_015915.5(ATL1):c.1337G>A (p.Arg446His)	Hereditary spastic paraplegia 3A [RCV002590195]	uncertain significance	14	50628248	50628248	Human	1	name
156013796	CV2038463	single nucleotide variant	NM_015915.5(ATL1):c.1208G>A (p.Arg403Gln)	Hereditary spastic paraplegia 3A [RCV002780286]	uncertain significance	14	50628119	50628119	Human	1	name
155956819	CV2087036	single nucleotide variant	NM_015915.5(ATL1):c.1214T>G (p.Val405Gly)	Hereditary spastic paraplegia 3A [RCV002862650]	likely pathogenic	14	50628125	50628125	Human	1	name
155986963	CV2097920	single nucleotide variant	NM_015915.5(ATL1):c.1101C>A (p.Tyr367Ter)	Hereditary spastic paraplegia 3A [RCV002882206]	pathogenic	14	50623230	50623230	Human	1	name
156335574	CV2099427	single nucleotide variant	NM_015915.5(ATL1):c.1415T>G (p.Ile472Ser)	Hereditary spastic paraplegia 3A [RCV002900182]	uncertain significance	14	50628326	50628326	Human	1	name
156302548	CV2146381	single nucleotide variant	NM_015915.5(ATL1):c.1665G>T (p.Lys555Asn)	Hereditary spastic paraplegia 3A [RCV003028164]	uncertain significance	14	50632327	50632327	Human	1	name
156107231	CV2149498	single nucleotide variant	NM_015915.5(ATL1):c.1369A>G (p.Ile457Val)	Hereditary spastic paraplegia 3A [RCV003021263]	uncertain significance	14	50628280	50628280	Human	1	name
156065615	CV2170707	single nucleotide variant	NM_015915.5(ATL1):c.1173C>A (p.His391Gln)	Hereditary spastic paraplegia 3A [RCV003019879]	uncertain significance	14	50628084	50628084	Human	1	name
156264762	CV2189126	single nucleotide variant	NM_015915.5(ATL1):c.1134C>G (p.Asp378Glu)	Hereditary spastic paraplegia 3A [RCV003044245]	uncertain significance	14	50628045	50628045	Human	1	name
10766960	CV222373	single nucleotide variant	NM_015915.5(ATL1):c.1193C>A (p.Ser398Tyr)	Hereditary spastic paraplegia 3A [RCV000203941]	likely pathogenic	14	50628104	50628104	Human	1	name
10766828	CV222374	single nucleotide variant	NM_015915.5(ATL1):c.1483C>T (p.Arg495Trp)	Hereditary spastic paraplegia 3A [RCV000203724]\|Hereditary spastic paraplegia [RCV001847927]\|Inborn genetic diseases [RCV000624103]\|not provided [RCV000390284]	pathogenic\|likely pathogenic	14	50628394	50628394	Human	3	name
243063644	CV2411923	single nucleotide variant	NM_015915.5(ATL1):c.1602C>A (p.His534Gln)	Hereditary spastic paraplegia 3A [RCV003502696]\|not provided [RCV003141647]	uncertain significance	14	50632264	50632264	Human	1	name
243063643	CV2411924	single nucleotide variant	NM_015915.5(ATL1):c.1229G>C (p.Gly410Ala)	not provided [RCV003141648]	uncertain significance	14	50628140	50628140	Human		name
243052981	CV2418065	single nucleotide variant	NM_015915.5(ATL1):c.1041G>T (p.Met347Ile)	Hereditary spastic paraplegia 3A [RCV003153130]	likely pathogenic	14	50621893	50621893	Human	1	name
401798521	CV2669603	single nucleotide variant	NM_015915.5(ATL1):c.1208G>C (p.Arg403Pro)	Hereditary spastic paraplegia 3A [RCV003320400]	likely pathogenic	14	50628119	50628119	Human	1	name
401727668	CV2736460	single nucleotide variant	NM_015915.5(ATL1):c.1024C>T (p.Pro342Ser)	Hereditary spastic paraplegia 3A [RCV003312908]	uncertain significance	14	50621876	50621876	Human	1	name
401727670	CV2736461	single nucleotide variant	NM_015915.5(ATL1):c.1025C>A (p.Pro342Gln)	Hereditary spastic paraplegia 3A [RCV003312909]	uncertain significance	14	50621877	50621877	Human	1	name
401727671	CV2736462	single nucleotide variant	NM_015915.5(ATL1):c.1030C>T (p.Pro344Ser)	Hereditary spastic paraplegia 3A [RCV003312910]	uncertain significance	14	50621882	50621882	Human	1	name
401727672	CV2736463	single nucleotide variant	NM_015915.5(ATL1):c.1193C>T (p.Ser398Phe)	Hereditary spastic paraplegia 3A [RCV003312911]\|not provided [RCV004719318]	pathogenic\|uncertain significance	14	50628104	50628104	Human	1	name
401727675	CV2736465	single nucleotide variant	NM_015915.5(ATL1):c.1237T>C (p.Phe413Leu)	Hereditary spastic paraplegia 3A [RCV003312913]	likely pathogenic\|uncertain significance	14	50628148	50628148	Human	1	name
401727677	CV2736466	single nucleotide variant	NM_015915.5(ATL1):c.1237T>G (p.Phe413Val)	Hereditary spastic paraplegia 3A [RCV003312914]	uncertain significance	14	50628148	50628148	Human	1	name
401727678	CV2736467	single nucleotide variant	NM_015915.5(ATL1):c.1319A>C (p.Asn440Thr)	Hereditary spastic paraplegia 3A [RCV003312915]	pathogenic\|uncertain significance	14	50628230	50628230	Human	1	name
401830751	CV2748324	single nucleotide variant	NM_015915.5(ATL1):c.1430G>C (p.Cys477Ser)	Hereditary spastic paraplegia 3A [RCV005061277]\|not provided [RCV003329933]	uncertain significance	14	50628341	50628341	Human	1	name
401902009	CV2810416	single nucleotide variant	NM_015915.5(ATL1):c.1269T>G (p.Ser423Arg)	not provided [RCV003393427]	uncertain significance	14	50628180	50628180	Human		name
402469879	CV2882212	single nucleotide variant	NM_015915.5(ATL1):c.1037C>T (p.Ser346Phe)	Hereditary spastic paraplegia 3A [RCV003504241]	uncertain significance	14	50621889	50621889	Human	1	name
402471277	CV2894803	single nucleotide variant	NM_015915.5(ATL1):c.1221G>C (p.Lys407Asn)	Hereditary spastic paraplegia 3A [RCV003504578]	uncertain significance	14	50628132	50628132	Human	1	name
402471273	CV2894804	single nucleotide variant	NM_015915.5(ATL1):c.1376A>G (p.Tyr459Cys)	Hereditary spastic paraplegia 3A [RCV003504579]	likely pathogenic	14	50628287	50628287	Human	1	name
405131796	CV2906793	single nucleotide variant	NM_015915.5(ATL1):c.1079T>G (p.Val360Gly)	Hereditary spastic paraplegia 3A [RCV003502217]	uncertain significance	14	50623208	50623208	Human	1	name
405134240	CV2915655	single nucleotide variant	NM_015915.5(ATL1):c.1129G>A (p.Gly377Ser)	Hereditary spastic paraplegia 3A [RCV003502473]	uncertain significance	14	50628040	50628040	Human	1	name
405079732	CV2988517	single nucleotide variant	NM_015915.5(ATL1):c.1144C>G (p.Leu382Val)	Hereditary spastic paraplegia 3A [RCV003612809]	uncertain significance	14	50628055	50628055	Human	1	name
405062636	CV3052042	single nucleotide variant	NM_015915.5(ATL1):c.1423A>G (p.Ser475Gly)	Hereditary spastic paraplegia 3A [RCV003611467]	uncertain significance	14	50628334	50628334	Human	1	name
405081930	CV3072401	single nucleotide variant	NM_015915.5(ATL1):c.1097C>T (p.Thr366Ile)	Hereditary spastic paraplegia 3A [RCV003612999]	uncertain significance	14	50623226	50623226	Human	1	name
405072602	CV3072825	single nucleotide variant	NM_015915.5(ATL1):c.1259A>C (p.Gln420Pro)	Hereditary spastic paraplegia 3A [RCV003612268]	uncertain significance	14	50628170	50628170	Human	1	name
405186383	CV3156388	single nucleotide variant	NM_015915.5(ATL1):c.1552G>A (p.Gly518Arg)	Hereditary spastic paraplegia 3A [RCV003859266]	uncertain significance	14	50629995	50629995	Human	1	name
405854085	CV3393762	single nucleotide variant	NM_015915.5(ATL1):c.1370T>C (p.Ile457Thr)	not provided [RCV004546988]	uncertain significance	14	50628281	50628281	Human		name
407525396	CV3485137	single nucleotide variant	NM_015915.5(ATL1):c.1616A>C (p.His539Pro)	Inborn genetic diseases [RCV004679224]	uncertain significance	14	50632278	50632278	Human	1	name
407505026	CV3485190	single nucleotide variant	NM_015915.5(ATL1):c.1553G>C (p.Gly518Ala)	Inborn genetic diseases [RCV004670673]	uncertain significance	14	50629996	50629996	Human	1	name
408389583	CV3524626	single nucleotide variant	NM_015915.5(ATL1):c.1237T>A (p.Phe413Ile)	not provided [RCV004769521]	uncertain significance	14	50628148	50628148	Human		name
596932740	CV3539367	single nucleotide variant	NM_015915.5(ATL1):c.1469C>T (p.Thr490Ile)	not provided [RCV004793991]	uncertain significance	14	50628380	50628380	Human		name
596926596	CV3542215	single nucleotide variant	NM_015915.5(ATL1):c.1006T>C (p.Tyr336His)	Hereditary spastic paraplegia 3A [RCV004796429]	uncertain significance	14	50621858	50621858	Human	1	name
12841017	CV373862	single nucleotide variant	NM_015915.5(ATL1):c.1651G>T (p.Glu551Ter)	not provided [RCV000431827]	uncertain significance	14	50632313	50632313	Human		name
12838554	CV374245	single nucleotide variant	NM_015915.5(ATL1):c.1078G>A (p.Val360Met)	Hereditary spastic paraplegia 3A [RCV000647932]\|Inborn genetic diseases [RCV002418324]\|not provided [RCV001721415]	likely pathogenic\|likely benign\|uncertain significance	14	50623207	50623207	Human	2	name
12836874	CV374247	single nucleotide variant	NM_015915.5(ATL1):c.1173C>G (p.His391Gln)	Hereditary spastic paraplegia 3A [RCV002526338]\|not provided [RCV000424185]	uncertain significance	14	50628084	50628084	Human	1	name
12845994	CV376079	single nucleotide variant	NM_015915.5(ATL1):c.1105A>C (p.Lys369Gln)	Inborn genetic diseases [RCV002429452]\|not provided [RCV000440807]	uncertain significance	14	50623234	50623234	Human	1	name
597925081	CV3778137	single nucleotide variant	NM_015915.5(ATL1):c.1435A>T (p.Met479Leu)	Hereditary spastic paraplegia 3A [RCV005130861]	uncertain significance	14	50628346	50628346	Human	1	name
597962794	CV3819452	single nucleotide variant	NM_015915.5(ATL1):c.1605A>C (p.Arg535Ser)	Hereditary spastic paraplegia 3A [RCV005164168]	uncertain significance	14	50632267	50632267	Human	1	name
597832505	CV3831263	single nucleotide variant	NM_015915.5(ATL1):c.1637A>G (p.Lys546Arg)	Hereditary spastic paraplegia 3A [RCV005170466]	uncertain significance	14	50632299	50632299	Human	1	name
597959668	CV3843425	single nucleotide variant	NM_015915.5(ATL1):c.1064A>C (p.Asn355Thr)	Hereditary spastic paraplegia 3A [RCV005192460]	uncertain significance	14	50623193	50623193	Human	1	name
597950262	CV3846750	single nucleotide variant	NM_015915.5(ATL1):c.1523A>C (p.Asp508Ala)	Hereditary spastic paraplegia 3A [RCV005189921]	uncertain significance	14	50628434	50628434	Human	1	name
597967954	CV3853316	single nucleotide variant	NM_015915.5(ATL1):c.1138C>A (p.Pro380Thr)	Hereditary spastic paraplegia 3A [RCV005194958]	uncertain significance	14	50628049	50628049	Human	1	name
597935922	CV3858932	single nucleotide variant	NM_015915.5(ATL1):c.1008T>G (p.Tyr336Ter)	Hereditary spastic paraplegia 3A [RCV005207653]	pathogenic	14	50621860	50621860	Human	1	name
597931893	CV3863296	single nucleotide variant	NM_015915.5(ATL1):c.1013G>A (p.Gly338Asp)	Hereditary spastic paraplegia 3A [RCV005206822]	uncertain significance	14	50621865	50621865	Human	1	name
8568445	CV39536	single nucleotide variant	NM_015915.5(ATL1):c.1065C>A (p.Asn355Lys)	Charcot-Marie-Tooth disease [RCV000789726]\|Neuropathy, hereditary sensory, type 1D [RCV000023542]\|Penetrating foot ulcers [RCV000626932]	pathogenic\|uncertain significance	14	50623194	50623194	Human	6	name
8602261	CV39539	single nucleotide variant	NM_015915.5(ATL1):c.1246C>T (p.Arg416Cys)	Hereditary spastic paraplegia 3A [RCV000023545]\|Hereditary spastic paraplegia [RCV001847621]\|Inborn genetic diseases [RCV002513195]\|Neuropathy, hereditary sensory, type 1D [RCV004767019]\|not provided [RCV002285257]	pathogenic\|likely pathogenic	14	50628157	50628157	Human	4	name
616939538	CV4014033	single nucleotide variant	NM_015915.5(ATL1):c.1249T>A (p.Tyr417Asn)	not provided [RCV005413525]	uncertain significance	14	50628160	50628160	Human		name
616939840	CV4014443	single nucleotide variant	NM_015915.5(ATL1):c.1378G>A (p.Val460Met)	not provided [RCV005413937]	uncertain significance	14	50628289	50628289	Human		name
616935525	CV4016089	single nucleotide variant	NM_015915.5(ATL1):c.1390G>A (p.Val464Met)	not provided [RCV005414955]	uncertain significance	14	50628301	50628301	Human		name
12893677	CV409129	single nucleotide variant	NM_015915.5(ATL1):c.1225G>T (p.Gly409Cys)	Hereditary spastic paraplegia 3A [RCV002526601]\|not provided [RCV000479836]	pathogenic\|likely pathogenic	14	50628136	50628136	Human	1	name
13469973	CV441649	single nucleotide variant	NM_015915.5(ATL1):c.1228G>A (p.Gly410Arg)	Hereditary spastic paraplegia 3A [RCV002527456]\|not provided [RCV000516661]	pathogenic\|likely pathogenic	14	50628139	50628139	Human	1	name
13478885	CV445236	single nucleotide variant	NM_015915.5(ATL1):c.1204T>C (p.Phe402Leu)	Hereditary spastic paraplegia 3A [RCV002248755]\|not provided [RCV000520804]	pathogenic\|likely pathogenic\|conflicting interpretations of pathogenicity	14	50628115	50628115	Human	1	name
13490840	CV463293	single nucleotide variant	NM_015915.5(ATL1):c.1057G>A (p.Glu353Lys)	Hereditary spastic paraplegia 3A [RCV000556273]	likely pathogenic\|uncertain significance	14	50623186	50623186	Human	1	name
13467534	CV463302	single nucleotide variant	NM_015915.5(ATL1):c.1275A>G (p.Ile425Met)	Hereditary spastic paraplegia 3A [RCV000543969]	uncertain significance	14	50628186	50628186	Human	1	name
13484163	CV463803	single nucleotide variant	NM_015915.5(ATL1):c.1213G>A (p.Val405Met)	Hereditary spastic paraplegia 3A [RCV000530204]\|not provided [RCV004767372]	uncertain significance	14	50628124	50628124	Human	1	name
13494267	CV463808	single nucleotide variant	NM_015915.5(ATL1):c.1379T>A (p.Val460Glu)	Hereditary spastic paraplegia 3A [RCV000558776]	uncertain significance	14	50628290	50628290	Human	1	name
13612517	CV514044	single nucleotide variant	NM_015915.4(ATL1):c.1065C>A (p.Asn355Lys)	Penetrating foot ulcers [RCV000626932]	pathogenic	14	50623194	50623194	Human	1	name
13620983	CV528207	single nucleotide variant	NM_015915.5(ATL1):c.1041G>A (p.Met347Ile)	Hereditary spastic paraplegia 3A [RCV000647936]\|not provided [RCV003483702]	likely pathogenic\|uncertain significance	14	50621893	50621893	Human	1	name
13620971	CV528210	single nucleotide variant	NM_015915.5(ATL1):c.1189G>C (p.Glu397Gln)	Hereditary spastic paraplegia 3A [RCV000647928]	uncertain significance	14	50628100	50628100	Human	1	name
13620980	CV528213	single nucleotide variant	NM_015915.5(ATL1):c.1556G>A (p.Ser519Asn)	Hereditary spastic paraplegia 3A [RCV000647935]\|Hereditary spastic paraplegia 3A [RCV003483701]	uncertain significance\|not provided	14	50629999	50629999	Human	1	name
13620975	CV528569	single nucleotide variant	NM_015915.5(ATL1):c.1024C>G (p.Pro342Ala)	Hereditary spastic paraplegia 3A [RCV000647931]	conflicting interpretations of pathogenicity\|uncertain significance	14	50621876	50621876	Human	1	name
13794491	CV552176	single nucleotide variant	NM_015915.5(ATL1):c.1206C>A (p.Phe402Leu)	Hereditary spastic paraplegia 3A [RCV000679930]	uncertain significance	14	50628117	50628117	Human	1	name
13794492	CV552177	single nucleotide variant	NM_015915.5(ATL1):c.1222A>T (p.Met408Leu)	Hereditary spastic paraplegia 3A [RCV000679931]	uncertain significance	14	50628133	50628133	Human	1	name
13821840	CV568939	single nucleotide variant	NM_015915.5(ATL1):c.1546G>A (p.Asp516Asn)	Hereditary spastic paraplegia 3A [RCV000696450]\|not provided [RCV000755830]	uncertain significance	14	50628457	50628457	Human	1	name
14396817	CV612988	single nucleotide variant	NM_015915.5(ATL1):c.1308T>A (p.Asn436Lys)	not provided [RCV000761874]	likely pathogenic	14	50628219	50628219	Human		name
14711685	CV642488	single nucleotide variant	NM_015915.5(ATL1):c.1048G>A (p.Ala350Thr)	Hereditary spastic paraplegia 3A [RCV000810038]	pathogenic\|uncertain significance	14	50623177	50623177	Human	1	name
14712476	CV642489	single nucleotide variant	NM_015915.5(ATL1):c.1068T>A (p.Asn356Lys)	Hereditary spastic paraplegia 3A [RCV000793809]	likely pathogenic	14	50623197	50623197	Human	1	name
14727433	CV642490	single nucleotide variant	NM_015915.5(ATL1):c.1160T>C (p.Leu387Ser)	Hereditary spastic paraplegia 3A [RCV000816079]\|not provided [RCV001547425]	pathogenic\|likely pathogenic\|uncertain significance	14	50628071	50628071	Human	1	name
14703449	CV642491	single nucleotide variant	NM_015915.5(ATL1):c.1259A>G (p.Gln420Arg)	Hereditary spastic paraplegia 3A [RCV000807382]	uncertain significance	14	50628170	50628170	Human	1	name
14728661	CV642492	single nucleotide variant	NM_015915.5(ATL1):c.1334C>T (p.Ala445Val)	Hereditary spastic paraplegia 3A [RCV000800152]	uncertain significance	14	50628245	50628245	Human	1	name
14711697	CV642493	single nucleotide variant	NM_015915.5(ATL1):c.1414A>G (p.Ile472Val)	Hereditary spastic paraplegia 3A [RCV000810041]	uncertain significance	14	50628325	50628325	Human	1	name
14712976	CV642494	single nucleotide variant	NM_015915.5(ATL1):c.1488C>A (p.Tyr496Ter)	Hereditary spastic paraplegia 3A [RCV000793973]	pathogenic\|uncertain significance	14	50628399	50628399	Human	1	name
14743537	CV642495	single nucleotide variant	NM_015915.5(ATL1):c.1502G>C (p.Arg501Pro)	Hereditary spastic paraplegia 3A [RCV000823500]	uncertain significance	14	50628413	50628413	Human	1	name
14732815	CV642496	single nucleotide variant	NM_015915.5(ATL1):c.1573T>C (p.Tyr525His)	Hereditary spastic paraplegia 3A [RCV000802025]	uncertain significance	14	50632235	50632235	Human	1	name
8617538	CV71462	single nucleotide variant	NM_015915.5(ATL1):c.1244G>A (p.Arg415Gln)	Hereditary spastic paraplegia 3A [RCV000050231]\|not provided [RCV000480817]	pathogenic\|likely pathogenic\|conflicting interpretations of pathogenicity\|uncertain significance	14	50628155	50628155	Human	1	name
21072588	CV791411	single nucleotide variant	NM_015915.5(ATL1):c.1223T>C (p.Met408Thr)	Hereditary spastic paraplegia 3A [RCV000989219]\|not provided [RCV001585898]	pathogenic	14	50628134	50628134	Human	1	name
21068026	CV793502	single nucleotide variant	NM_015915.5(ATL1):c.1040T>C (p.Met347Thr)	Hereditary spastic paraplegia 3A [RCV003311931]\|not provided [RCV000993058]	pathogenic\|uncertain significance	14	50621892	50621892	Human	1	name
21074481	CV797035	single nucleotide variant	NM_015915.5(ATL1):c.1055C>A (p.Ala352Glu)	not provided [RCV000995174]	likely pathogenic	14	50623184	50623184	Human		name
25327659	CV816001	single nucleotide variant	NM_015915.5(ATL1):c.1216A>G (p.Lys406Glu)	Hereditary spastic paraplegia 3A [RCV001027705]	likely pathogenic	14	50628127	50628127	Human	1	name
26892624	CV841545	single nucleotide variant	NM_015915.5(ATL1):c.1030C>A (p.Pro344Thr)	Hereditary spastic paraplegia 3A [RCV001068765]	uncertain significance	14	50621882	50621882	Human	1	name
26923528	CV841546	single nucleotide variant	NM_015915.5(ATL1):c.1247G>A (p.Arg416His)	Hereditary spastic paraplegia 3A [RCV001064153]\|Inborn genetic diseases [RCV002393313]\|not provided [RCV001593242]	likely pathogenic\|conflicting interpretations of pathogenicity\|uncertain significance	14	50628158	50628158	Human	2	name
26923087	CV841547	single nucleotide variant	NM_015915.5(ATL1):c.1355T>C (p.Phe452Ser)	Hereditary spastic paraplegia 3A [RCV001063282]\|Hereditary spastic paraplegia 3A [RCV005012515]\|not provided [RCV002462308]	uncertain significance	14	50628266	50628266	Human	1	name
26902005	CV841548	single nucleotide variant	NM_015915.5(ATL1):c.1673T>C (p.Met558Thr)	Hereditary spastic paraplegia 3A [RCV001071748]	uncertain significance	14	50632335	50632335	Human	1	name
28877911	CV860108	single nucleotide variant	NM_015915.5(ATL1):c.1226G>A (p.Gly409Asp)	Hereditary spastic paraplegia 3A [RCV003502587]\|Hereditary spastic paraplegia [RCV001847151]\|not provided [RCV001090531]	pathogenic\|conflicting interpretations of pathogenicity\|uncertain significance	14	50628137	50628137	Human	2	name
38458147	CV948579	single nucleotide variant	NM_015915.5(ATL1):c.1142T>A (p.Phe381Tyr)	Hereditary spastic paraplegia 3A [RCV001228830]	uncertain significance	14	50628053	50628053	Human	1	name
38469489	CV948580	single nucleotide variant	NM_015915.5(ATL1):c.1295A>G (p.Tyr432Cys)	Hereditary spastic paraplegia 3A [RCV001230783]	uncertain significance	14	50628206	50628206	Human	1	name
38489407	CV948581	single nucleotide variant	NM_015915.5(ATL1):c.1322T>G (p.Ile441Ser)	Hereditary spastic paraplegia 3A [RCV001238403]\|not provided [RCV001288450]	uncertain significance	14	50628233	50628233	Human	1	name
38476017	CV948582	single nucleotide variant	NM_015915.5(ATL1):c.1330G>T (p.Ala444Ser)	Hereditary spastic paraplegia 3A [RCV001232886]\|not provided [RCV001760239]	uncertain significance	14	50628241	50628241	Human	1	name
38470229	CV948583	single nucleotide variant	NM_015915.5(ATL1):c.1673T>A (p.Met558Lys)	Hereditary spastic paraplegia 3A [RCV001230923]\|not provided [RCV003227012]	uncertain significance	14	50632335	50632335	Human	1	name
38468322	CV957232	single nucleotide variant	NM_015915.5(ATL1):c.1314C>G (p.Ser438Arg)	Hereditary spastic paraplegia 3A [RCV001248013]\|not provided [RCV004769967]	uncertain significance	14	50628225	50628225	Human	1	name
38598227	CV964416	single nucleotide variant	NM_015915.5(ATL1):c.1634C>T (p.Pro545Leu)	Neuropathy, hereditary sensory, type 1D [RCV001253483]	uncertain significance	14	50632296	50632296	Human	1	name
40814803	CV970144	single nucleotide variant	NM_015915.5(ATL1):c.1472G>A (p.Trp491Ter)	Hereditary spastic paraplegia 3A [RCV001261529]	pathogenic	14	50628383	50628383	Human	1	name
40887947	CV973926	single nucleotide variant	NM_015915.5(ATL1):c.1220A>T (p.Lys407Met)	Hereditary spastic paraplegia 3A [RCV001391396]\|Inborn genetic diseases [RCV001267476]	pathogenic\|likely pathogenic	14	50628131	50628131	Human	2	name
127233992	CV977103	single nucleotide variant	NM_015915.5(ATL1):c.1065C>G (p.Asn355Lys)	Hereditary spastic paraplegia 3A [RCV001391394]	pathogenic	14	50623194	50623194	Human	1	name
127234100	CV977105	single nucleotide variant	NM_015915.5(ATL1):c.1306A>G (p.Asn436Asp)	Hereditary spastic paraplegia 3A [RCV001391448]	pathogenic\|conflicting interpretations of pathogenicity	14	50628217	50628217	Human	1	name
127234103	CV977106	single nucleotide variant	NM_015915.5(ATL1):c.1543T>C (p.Trp515Arg)	Hereditary spastic paraplegia 3A [RCV001391449]	pathogenic	14	50628454	50628454	Human	1	name
126727757	CV995864	single nucleotide variant	NM_015915.5(ATL1):c.1157A>G (p.Asp386Gly)	Hereditary spastic paraplegia 3A [RCV001303229]	uncertain significance	14	50628068	50628068	Human	1	name
126758924	CV995865	single nucleotide variant	NM_015915.5(ATL1):c.1274T>C (p.Ile425Thr)	Hereditary spastic paraplegia 3A [RCV001299340]\|not provided [RCV004720840]	uncertain significance	14	50628185	50628185	Human	1	name
14734637	CV667670	insertion	NM_015915.5(ATL1):c.1119+136_1119+137insAT	Neuropathy, hereditary sensory, type 1D [RCV001554130]\|not provided [RCV000837646]	benign	14	50623384	50623385	Human	1	name
8627529	CV82673	single nucleotide variant	NM_001127713.1(ATL1):c.794C>T (p.Ser265Phe)	Malignant melanoma [RCV000062753]	not provided	14	50614443	50614443	Human		name
405701198	CV3279955	microsatellite	NM_015915.5(ATL1):c.1614TCA[1] (p.His539del)	Inborn genetic diseases [RCV004425437]	uncertain significance	14	50632275	50632277	Human		name
13520340	CV495758	insertion	NM_015915.5(ATL1):c.781_782insA (p.Phe261fs)	Hereditary spastic paraplegia 3A [RCV000810980]\|not provided [RCV000598554]	pathogenic\|conflicting interpretations of pathogenicity\|uncertain significance	14	50614430	50614431	Human	1	name
21074912	CV798676	microsatellite	NM_015915.5(ATL1):c.1217AGA[1] (p.Lys407del)	Hereditary spastic paraplegia 3A [RCV000995703]\|Hereditary spastic paraplegia [RCV001847131]\|not provided [RCV002307651]	pathogenic\|likely pathogenic	14	50628126	50628128	Human		name
8627530	CV82674	single nucleotide variant	NM_001127713.1(ATL1):c.1189G>A (p.Glu397Lys)	Malignant melanoma [RCV000062754]	not provided	14	50628100	50628100	Human		name
151713990	CV1442995	microsatellite	NM_015915.5(ATL1):c.1505_1506del (p.Glu502fs)	Hereditary spastic paraplegia 3A [RCV002013922]	uncertain significance	14	50628413	50628414	Human		name
401727680	CV2736468	microsatellite	NM_015915.5(ATL1):c.1465_1466dup (p.Thr490fs)	Hereditary spastic paraplegia 3A [RCV003312916]	uncertain significance	14	50628373	50628374	Human		name
405080598	CV2989782	deletion	NM_015915.5(ATL1):c.1030_1040del (p.Pro344fs)	Hereditary spastic paraplegia 3A [RCV003612879]	pathogenic	14	50621879	50621889	Human	1	name
14716218	CV667356	insertion	NM_015915.5(ATL1):c.1552-103_1552-102insTTCTT	not provided [RCV000829654]	benign	14	50629892	50629893	Human		name
8558039	CV19393	deletion	NM_015915.5(ATL1):c.1306_1308del (p.Asn436del)	Hereditary spastic paraplegia 3A [RCV000004602]\|Hereditary spastic paraplegia [RCV001847580]	pathogenic\|likely pathogenic	14	50628217	50628219	Human	2	name
156247662	CV2168749	deletion	NM_015915.5(ATL1):c.1021_1023del (p.Leu341del)	Hereditary spastic paraplegia 3A [RCV003026230]	likely pathogenic	14	50621872	50621874	Human	1	name
597830930	CV3743663	microsatellite	NM_015915.5(ATL1):c.56_57del (p.Thr18_Tyr19insTer)	Hereditary spastic paraplegia 3A [RCV005062480]	pathogenic	14	50587850	50587851	Human		name
150529615	CV1292895	deletion	NM_015915.5(ATL1):c.1516del (p.Ala505_Val506insTer)	Hereditary spastic paraplegia 3A [RCV005094925]\|not provided [RCV001756288]	pathogenic\|uncertain significance	14	50628427	50628427	Human	1	name

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