LOC103690886 (uncharacterized LOC103690886) - Rat Genome Database

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Gene: LOC103690886 (uncharacterized LOC103690886) Rattus norvegicus
Analyze
Symbol: LOC103690886
Name: uncharacterized LOC103690886
RGD ID: 9463875
Description:
Type: ncrna
RefSeq Status: MODEL
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X107,683,222 - 107,723,860 (-)NCBIGRCr8GRCr8GRCr8
mRatBN7.2X102,894,655 - 102,935,220 (-)NCBImRatBN7.2mRatBN7.2
Rnor_6.0X110,477,183 - 110,487,576 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
CeleraX103,661,848 - 103,683,247 (-)NCBICelera
Cytogenetic MapXq32NCBI
JBrowse:




References

Genomics

Variants

.
Variants in LOC103690886
276 total Variants

QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1598872Memor14Memory QTL 144.5exploratory behavior trait (VT:0010471)difference between duration of physical contact or close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X97528096142528096Rat
738025Stresp3Stress response QTL 34.610.0066stress-related behavior trait (VT:0010451)defensive burying - approachX105359969157758123Rat
61430Cia18Collagen induced arthritis QTL 183.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)X80434318125434318Rat
738029Stresp2Stress response QTL 23.40.0004stress-related behavior trait (VT:0010451)defensive burying - approachX92979612117740458Rat
61431Cia19Collagen induced arthritis QTL 194.4joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)X105468858125434318Rat
738035Stresp1Stress response QTL 14.960.000011stress-related behavior trait (VT:0010451)defensive burying - copingX45182909117740458Rat
2302047Pia34Pristane induced arthritis QTL 345.80.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)1996916163141916163Rat


Expression

RNA-SEQ Expression

circulatory system
ectoderm
mesenchyme
mesoderm
nervous system
reproductive system
sensory system
visual system
1 1 1 1 1 1 1 1

Sequence


RefSeq Acc Id: XR_010061342
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X107,683,226 - 107,723,860 (-)NCBI
RefSeq Acc Id: XR_010061343
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X107,683,222 - 107,723,860 (-)NCBI

Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-1562 BioCyc
NCBI Gene LOC103690886 ENTREZGENE
PhenoGen LOC103690886 PhenoGen
RNAcentral URS0000CCEA1D RNACentral
  URS0000CD07A9 RNACentral


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2014-08-25 LOC103690886  uncharacterized LOC103690886      Symbol and Name status set to provisional 70820 PROVISIONAL