LOC120094299 (uncharacterized LOC120094299) - Rat Genome Database

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Gene: LOC120094299 (uncharacterized LOC120094299) Rattus norvegicus
Analyze
Symbol: LOC120094299
Name: uncharacterized LOC120094299
RGD ID: 40994054
Description:
Type: ncrna
RefSeq Status: VALIDATED
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88129,844,099 - 129,851,884 (+)NCBIGRCr8GRCr8GRCr8
mRatBN7.28120,966,220 - 120,974,357 (+)NCBImRatBN7.2mRatBN7.2
Dahl_SR_JrHsd8130,707,125 - 130,715,390 (+)NCBIDahl_SR_JrHsd
Lyon_Normotensive8132,808,819 - 132,817,084 (+)NCBILyon_Normotensive
Lyon_Hypertensive8131,295,445 - 131,303,710 (+)NCBILyon_Hypertensive
F344_StmMcwi8122,702,287 - 122,710,552 (+)NCBIF344_StmMcwi
Cytogenetic Map8q32NCBI
JBrowse:




References

Genomics


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
738011Anxrr9Anxiety related response QTL 96.1exploratory behavior trait (VT:0010471)number of entries into a discrete space in an experimental apparatus (CMO:0000960)8102413464132782436Rat
724539Cm19Cardiac mass QTL 192.6heart mass (VT:0007028)calculated heart weight (CMO:0000073)8103375781129871912Rat
2303171Bp331Blood pressure QTL 3315.570.005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)8105462581132782436Rat
634332Pia18Pristane induced arthritis QTL 184joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)884192326132782436Rat
2300181Bmd55Bone mineral density QTL 555.70.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)885348065130348065Rat
1300171Bp184Blood pressure QTL 1843.66arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)879394435132782436Rat
61437Cia6Collagen induced arthritis QTL 6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)891340911131690273Rat


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
exocrine system
hemolymphoid system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
sensory system
visual system
7 7 1 79 133 6 103 13 230 198 11 132 32 32 14 14

Sequence


RefSeq Acc Id: NR_190864
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Dahl_SR_JrHsd8130,707,125 - 130,715,390 (+)NCBI
Lyon_Normotensive8132,808,819 - 132,817,084 (+)NCBI
Lyon_Hypertensive8131,295,445 - 131,303,710 (+)NCBI
F344_StmMcwi8122,702,287 - 122,710,552 (+)NCBI
RefSeq Acc Id: NR_190865
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Dahl_SR_JrHsd8130,707,125 - 130,715,390 (+)NCBI
Lyon_Normotensive8132,808,819 - 132,817,084 (+)NCBI
Lyon_Hypertensive8131,295,445 - 131,303,710 (+)NCBI
F344_StmMcwi8122,702,287 - 122,710,552 (+)NCBI
RefSeq Acc Id: NR_190866
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Dahl_SR_JrHsd8130,707,125 - 130,715,390 (+)NCBI
Lyon_Normotensive8132,808,819 - 132,817,084 (+)NCBI
Lyon_Hypertensive8131,295,445 - 131,303,710 (+)NCBI
F344_StmMcwi8122,702,287 - 122,710,552 (+)NCBI
RefSeq Acc Id: NR_190867
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Dahl_SR_JrHsd8130,707,592 - 130,715,390 (+)NCBI
Lyon_Normotensive8132,809,286 - 132,817,084 (+)NCBI
Lyon_Hypertensive8131,295,912 - 131,303,710 (+)NCBI
F344_StmMcwi8122,702,754 - 122,710,552 (+)NCBI
RefSeq Acc Id: NR_190868
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Dahl_SR_JrHsd8130,707,592 - 130,715,390 (+)NCBI
Lyon_Normotensive8132,809,286 - 132,817,084 (+)NCBI
Lyon_Hypertensive8131,295,912 - 131,303,710 (+)NCBI
F344_StmMcwi8122,702,754 - 122,710,552 (+)NCBI
RefSeq Acc Id: NR_190869
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Dahl_SR_JrHsd8130,707,592 - 130,715,390 (+)NCBI
Lyon_Normotensive8132,809,286 - 132,817,084 (+)NCBI
Lyon_Hypertensive8131,295,912 - 131,303,710 (+)NCBI
F344_StmMcwi8122,702,754 - 122,710,552 (+)NCBI
RefSeq Acc Id: NR_190870
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Dahl_SR_JrHsd8130,707,592 - 130,715,390 (+)NCBI
Lyon_Normotensive8132,809,286 - 132,817,084 (+)NCBI
Lyon_Hypertensive8131,295,912 - 131,303,710 (+)NCBI
F344_StmMcwi8122,702,754 - 122,710,552 (+)NCBI
RefSeq Acc Id: NR_190871
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Dahl_SR_JrHsd8130,707,592 - 130,715,390 (+)NCBI
Lyon_Normotensive8132,809,286 - 132,817,084 (+)NCBI
Lyon_Hypertensive8131,295,912 - 131,303,710 (+)NCBI
F344_StmMcwi8122,702,754 - 122,710,552 (+)NCBI
RefSeq Acc Id: XR_005488577
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88129,844,395 - 129,851,884 (+)NCBI
mRatBN7.28120,966,220 - 120,974,357 (+)NCBI
RefSeq Acc Id: XR_005488578
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88129,844,188 - 129,851,884 (+)NCBI
mRatBN7.28120,966,406 - 120,974,357 (+)NCBI
RefSeq Acc Id: XR_005488579
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88129,844,099 - 129,851,884 (+)NCBI
mRatBN7.28120,966,406 - 120,970,903 (+)NCBI
RefSeq Acc Id: XR_005488580
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88129,844,109 - 129,851,884 (+)NCBI
mRatBN7.28120,966,406 - 120,974,357 (+)NCBI
RefSeq Acc Id: XR_010054518
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88129,844,214 - 129,851,884 (+)NCBI

Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-28705 BioCyc
NCBI Gene LOC120094299 ENTREZGENE
PhenoGen LOC120094299 PhenoGen
RNAcentral URS0002A14627 RNACentral
  URS0002A14644 RNACentral
  URS0002A146A7 RNACentral
  URS0002A14761 RNACentral
  URS0002A1476C RNACentral
  URS0002A147A3 RNACentral
  URS0002A147D3 RNACentral
  URS0002A14872 RNACentral


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-01-26 LOC120094299  uncharacterized LOC120094299      Symbol and Name status set to provisional 70820 PROVISIONAL