LOC119874362 (U4 spliceosomal RNA) - Rat Genome Database

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Gene: LOC119874362 (U4 spliceosomal RNA) Canis lupus familiaris
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Symbol: LOC119874362 (Ensembl: U4)
Name: U4 spliceosomal RNA
RGD ID: 40908727
Description: ENCODES an snrna that exhibits U6 snRNA binding (inferred); INVOLVED IN formation of quadruple SL/U4/U5/U6 snRNP (inferred); spliceosomal tri-snRNP complex assembly (inferred); FOUND IN U4 snRNP (inferred); U4/U6 x U5 tri-snRNP complex (inferred)
Type: snrna
RefSeq Status: MODEL
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Dog10K_Boxer_Tasha12363,044 - 363,190 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.012368,819 - 368,965 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl12368,819 - 368,965 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.112225,446 - 225,592 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.012296,337 - 296,483 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.012367,048 - 367,194 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0



Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

Genomics


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSCAFT00845011539
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl12368,819 - 368,965 (-)Ensembl
RefSeq Acc Id: XR_005334655
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.112225,446 - 225,592 (-)NCBI
RefSeq Acc Id: XR_005368226
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.012367,048 - 367,194 (-)NCBI
RefSeq Acc Id: XR_005402557
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.012296,337 - 296,483 (-)NCBI
RefSeq Acc Id: XR_005435998
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.012368,819 - 368,965 (-)NCBI
RefSeq Acc Id: XR_005438026
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha12363,044 - 363,190 (-)NCBI

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00845006506 Ensembl, ENTREZGENE
Ensembl Transcript ENSCAFT00845011539 ENTREZGENE
NCBI Gene LOC119874362 ENTREZGENE
RNAcentral URS00006D09CE RNACentral