LOC100513367 (olfactory receptor 51H1-like) - Rat Genome Database

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Gene: LOC100513367 (olfactory receptor 51H1-like) Sus scrofa
Analyze
No known orthologs.
Symbol: LOC100513367
Name: olfactory receptor 51H1-like
RGD ID: 14271840
Description: ENCODES a protein that exhibits G protein-coupled receptor activity (inferred); olfactory receptor activity (inferred); signaling receptor activity (inferred); INVOLVED IN cellular response to lipid (inferred); detection of chemical stimulus involved in sensory perception of smell (inferred); G protein-coupled receptor signaling pathway (inferred); FOUND IN membrane (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Alliance Orthologs
More Info homologs ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.195,252,277 - 5,256,940 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.295,886,175 - 5,887,107 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
membrane  (IEA)
plasma membrane  (IBA,IEA)

Molecular Function

References
Additional References at PubMed
PMID:22301074  


Genomics

Variants

.
Variants in LOC100513367
225 total Variants

Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_021062399 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AEMK02000069 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XM_021062399   ⟹   XP_020918058
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.195,252,277 - 5,256,940 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_020918058 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSSCP00000065250
  ENSSSCP00000065250.1
  ENSSSCP00025036663.1
  ENSSSCP00045002498.1
  ENSSSCP00055008161.1
  ENSSSCP00070037251.1
RefSeq Acc Id: XP_020918058   ⟸   XM_021062399
- UniProtKB: A0A5G2QL22 (UniProtKB/TrEMBL),   A0A4X1V727 (UniProtKB/TrEMBL),   A0A8D1PQW5 (UniProtKB/TrEMBL)
- Sequence:
Protein Domains
G-protein coupled receptors family 1 profile


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000043619 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00025061562 UniProtKB/TrEMBL
  ENSSSCG00045002531 UniProtKB/TrEMBL
  ENSSSCG00055005305 UniProtKB/TrEMBL
  ENSSSCG00070022247 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000086888 ENTREZGENE
  ENSSSCT00000086888.2 UniProtKB/TrEMBL
  ENSSSCT00025084268.1 UniProtKB/TrEMBL
  ENSSSCT00045003946.1 UniProtKB/TrEMBL
  ENSSSCT00055010333.1 UniProtKB/TrEMBL
  ENSSSCT00070044219.1 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
  Olfactory_rcpt UniProtKB/TrEMBL
NCBI Gene LOC100513367 ENTREZGENE
PANTHER OLFACTORY RECEPTOR UniProtKB/TrEMBL
  OLFACTORY RECEPTOR 56B1-RELATED UniProtKB/TrEMBL
Pfam 7tm_4 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A4X1V727 ENTREZGENE, UniProtKB/TrEMBL
  A0A5G2QL22 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1PQW5 ENTREZGENE, UniProtKB/TrEMBL