TMEM265 (transmembrane protein 265) - Rat Genome Database

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Pathways
Gene: TMEM265 (transmembrane protein 265) Sus scrofa
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Symbol: TMEM265
Name: transmembrane protein 265
RGD ID: 14151720
Description: FOUND IN membrane (inferred)
Type: protein-coding
RefSeq Status: VALIDATED
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl317,660,255 - 17,663,543 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1317,660,249 - 17,663,879 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2318,106,734 - 18,110,192 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
membrane  (IEA)

References
Additional References at PubMed
PMID:12226715   PMID:17407547   PMID:22301074  


Genomics

Comparative Map Data
TMEM265
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl317,660,255 - 17,663,543 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1317,660,249 - 17,663,879 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2318,106,734 - 18,110,192 (-)NCBISscrofa10.2Sscrofa10.2susScr3
TMEM265
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381630,740,642 - 30,745,196 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1630,740,642 - 30,745,196 (+)Ensemblhg38GRCh38
GRCh371630,751,963 - 30,756,517 (+)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map16p11.2NCBI
HuRef1628,314,322 - 28,319,326 (+)NCBIHuRef
CHM1_11632,068,744 - 32,073,748 (+)NCBICHM1_1
T2T-CHM13v2.01631,127,651 - 31,132,204 (+)NCBIT2T-CHM13v2.0
Tmem265
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397127,160,395 - 127,164,443 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7127,160,562 - 127,166,112 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm387127,561,223 - 127,565,271 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7127,561,390 - 127,566,940 (+)Ensemblmm10GRCm38
Celera7127,406,192 - 127,410,240 (+)NCBICelera
Cytogenetic Map7F3NCBI
Tmem265
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81191,603,200 - 191,607,096 (+)NCBIGRCr8GRCr8GRCr8
mRatBN7.21182,172,704 - 182,176,600 (+)NCBImRatBN7.2mRatBN7.2
UTH_Rnor_SHR_Utx1190,523,280 - 190,527,176 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01197,709,363 - 197,713,259 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01190,379,866 - 190,383,762 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd1190,917,355 - 190,921,264 (+)NCBIDahl_SR_JrHsd
Lyon_Normotensive1195,919,165 - 195,923,061 (+)NCBILyon_Normotensive
Lyon_Hypertensive1192,586,692 - 192,590,588 (+)NCBILyon_Hypertensive
F344_StmMcwi1190,877,074 - 190,880,979 (+)NCBIF344_StmMcwi
Rnor_6.01199,007,637 - 199,011,533 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01206,015,998 - 206,019,415 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41186,846,194 - 186,850,092 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1179,824,191 - 179,828,075 (+)NCBICelera
Cytogenetic Map1q37NCBI
Tmem265
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554937,603,434 - 7,607,510 (+)Ensembl
ChiLan1.0NW_0049554937,603,434 - 7,607,510 (+)NCBIChiLan1.0ChiLan1.0
TMEM265
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21833,945,489 - 33,952,212 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11638,746,634 - 38,753,671 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01624,225,712 - 24,229,731 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11631,106,850 - 31,111,354 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1631,106,374 - 31,111,354 (+)EnsemblpanPan2panpan1.1
TMEM265
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1617,433,564 - 17,436,683 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl617,433,564 - 17,436,683 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha619,008,479 - 19,011,598 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0617,565,289 - 17,568,408 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl617,565,294 - 17,572,827 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1617,365,548 - 17,368,667 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0617,283,232 - 17,286,351 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0617,596,052 - 17,599,171 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Tmem265
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344125,033,365 - 125,037,470 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493650113,131,255 - 13,135,324 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_00493650113,131,267 - 13,135,328 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TMEM265
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1527,428,424 - 27,433,084 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660682,043,556 - 2,048,342 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tmem265
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248712,980,482 - 2,984,880 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Tmem265
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1274,337,658 - 74,341,489 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in TMEM265
53 total Variants

Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
hemolymphoid system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
10 4 23 3 2 5 14 12 23 3 6 3

Sequence


Ensembl Acc Id: ENSSSCT00000056375   ⟹   ENSSSCP00000054046
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl317,660,254 - 17,688,586 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000103024   ⟹   ENSSSCP00000077325
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl317,660,255 - 17,663,543 (-)Ensembl
RefSeq Acc Id: NM_001304279   ⟹   NP_001291208
RefSeq Status: VALIDATED
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1317,660,249 - 17,663,707 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013992348   ⟹   XP_013847802
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1317,660,249 - 17,663,879 (-)NCBI
Sequence:
RefSeq Acc Id: XP_013847802   ⟸   XM_013992348
- Peptide Label: isoform X1
- UniProtKB: A0A287BBZ1 (UniProtKB/TrEMBL),   A0A4X1TQ89 (UniProtKB/TrEMBL),   A0A8D1T421 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001291208   ⟸   NM_001304279
- UniProtKB: A0A287BBZ1 (UniProtKB/TrEMBL),   A0A4X1TQ89 (UniProtKB/TrEMBL),   A0A8D1T421 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSSCP00000054046   ⟸   ENSSSCT00000056375
Ensembl Acc Id: ENSSSCP00000077325   ⟸   ENSSSCT00000103024


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000035518 Ensembl
  ENSSSCG00000058422 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00015023639 UniProtKB/TrEMBL
  ENSSSCG00025051944 UniProtKB/TrEMBL
  ENSSSCG00030057584 UniProtKB/TrEMBL
  ENSSSCG00035075391 UniProtKB/TrEMBL
  ENSSSCG00040073392 UniProtKB/TrEMBL
  ENSSSCG00045034474 UniProtKB/TrEMBL
  ENSSSCG00050077424 UniProtKB/TrEMBL
  ENSSSCG00055017589 UniProtKB/TrEMBL
  ENSSSCG00060017043 UniProtKB/TrEMBL
  ENSSSCG00065079015 UniProtKB/TrEMBL
  ENSSSCG00070010820 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000103024 ENTREZGENE
  ENSSSCT00000103024.1 UniProtKB/TrEMBL
  ENSSSCT00015031374.1 UniProtKB/TrEMBL
  ENSSSCT00025071084.1 UniProtKB/TrEMBL
  ENSSSCT00030080315.1 UniProtKB/TrEMBL
  ENSSSCT00035102460.1 UniProtKB/TrEMBL
  ENSSSCT00040101269.1 UniProtKB/TrEMBL
  ENSSSCT00045059029.1 UniProtKB/TrEMBL
  ENSSSCT00050106545.1 UniProtKB/TrEMBL
  ENSSSCT00055034512.1 UniProtKB/TrEMBL
  ENSSSCT00060022771.1 UniProtKB/TrEMBL
  ENSSSCT00065109795.1 UniProtKB/TrEMBL
  ENSSSCT00070020990.1 UniProtKB/TrEMBL
InterPro CD225/Dispanin_fam UniProtKB/TrEMBL
KEGG Report ssc:100513980 UniProtKB/TrEMBL
NCBI Gene TMEM265 ENTREZGENE
Pfam CD225 UniProtKB/TrEMBL
UniProt A0A287BBZ1 ENTREZGENE
  A0A4X1TQ89 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1T421 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary A0A287BBZ1 UniProtKB/TrEMBL