| Gene: TMEM265 (transmembrane protein 265) Sus scrofa |
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 Analyze |
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| Symbol: |
TMEM265 |
| Name: |
transmembrane protein 265 |
| RGD ID: |
14151720 |
| Description: |
FOUND IN membrane (inferred) |
| Type: |
protein-coding
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| RefSeq Status: |
VALIDATED |
| RGD Orthologs |
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| Alliance Orthologs |
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| More Info |
more info ...
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| More Info |
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| Latest Assembly: |
Sscrofa11.1 - Pig Sscrofa11.1 Assembly |
| Position: |
| Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 3 | 17,660,255 - 17,663,543 (-) | Ensembl | | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 3 | 17,660,249 - 17,663,879 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 3 | 18,106,734 - 18,110,192 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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| JBrowse: |
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References
Additional References at PubMed
Genomics
Comparative Map Data
TMEM265 (Sus scrofa - pig) |
| Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 3 | 17,660,255 - 17,663,543 (-) | Ensembl | | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 3 | 17,660,249 - 17,663,879 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 3 | 18,106,734 - 18,110,192 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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TMEM265 (Homo sapiens - human) |
| Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 16 | 30,740,642 - 30,745,196 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 16 | 30,740,642 - 30,745,196 (+) | Ensembl | | | hg38 | GRCh38 | GRCh37 | 16 | 30,751,963 - 30,756,517 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Cytogenetic Map | 16 | p11.2 | NCBI | | | | | HuRef | 16 | 28,314,322 - 28,319,326 (+) | NCBI | | HuRef | | | CHM1_1 | 16 | 32,068,744 - 32,073,748 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 16 | 31,127,651 - 31,132,204 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Tmem265 (Mus musculus - house mouse) |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 7 | 127,160,395 - 127,164,443 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 7 | 127,160,562 - 127,166,112 (+) | Ensembl | | GRCm39 Ensembl | | GRCm39 | GRCm38 | 7 | 127,561,223 - 127,565,271 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 7 | 127,561,390 - 127,566,940 (+) | Ensembl | | | mm10 | GRCm38 | Celera | 7 | 127,406,192 - 127,410,240 (+) | NCBI | | Celera | | | Cytogenetic Map | 7 | F3 | NCBI | | | | |
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Tmem265 (Rattus norvegicus - Norway rat) |
| Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 1 | 191,603,200 - 191,607,096 (+) | NCBI | GRCr8 | GRCr8 | | GRCr8 | mRatBN7.2 | 1 | 182,172,704 - 182,176,600 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | UTH_Rnor_SHR_Utx | 1 | 190,523,280 - 190,527,176 (+) | NCBI | UTH_Rnor_SHR_Utx | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 1 | 197,709,363 - 197,713,259 (+) | NCBI | UTH_Rnor_SHRSP_BbbUtx_1.0 | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 1 | 190,379,866 - 190,383,762 (+) | NCBI | UTH_Rnor_WKY_Bbb_1.0 | UTH_Rnor_WKY_Bbb_1.0 | | | Dahl_SR_JrHsd | 1 | 190,917,355 - 190,921,264 (+) | NCBI | | Dahl_SR_JrHsd | | | Lyon_Normotensive | 1 | 195,919,165 - 195,923,061 (+) | NCBI | | Lyon_Normotensive | | | Lyon_Hypertensive | 1 | 192,586,692 - 192,590,588 (+) | NCBI | | Lyon_Hypertensive | | | F344_StmMcwi | 1 | 190,877,074 - 190,880,979 (+) | NCBI | | F344_StmMcwi | | | Rnor_6.0 | 1 | 199,007,637 - 199,011,533 (+) | NCBI | Rnor_6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_5.0 | 1 | 206,015,998 - 206,019,415 (+) | NCBI | Rnor_5.0 | Rnor_5.0 | rn5 | | RGSC_v3.4 | 1 | 186,846,194 - 186,850,092 (+) | NCBI | RGSC_v3.4 | RGSC_v3.4 | rn4 | | Celera | 1 | 179,824,191 - 179,828,075 (+) | NCBI | | Celera | | | Cytogenetic Map | 1 | q37 | NCBI | | | | |
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Tmem265 (Chinchilla lanigera - long-tailed chinchilla) |
| Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955493 | 7,603,434 - 7,607,510 (+) | Ensembl | | | | | ChiLan1.0 | NW_004955493 | 7,603,434 - 7,607,510 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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TMEM265 (Pan paniscus - bonobo/pygmy chimpanzee) |
| Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 18 | 33,945,489 - 33,952,212 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 16 | 38,746,634 - 38,753,671 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 16 | 24,225,712 - 24,229,731 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 16 | 31,106,850 - 31,111,354 (+) | NCBI | PanPan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 16 | 31,106,374 - 31,111,354 (+) | Ensembl | | | panPan2 | panpan1.1 |
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TMEM265 (Canis lupus familiaris - dog) |
| Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 6 | 17,433,564 - 17,436,683 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 6 | 17,433,564 - 17,436,683 (-) | Ensembl | | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 6 | 19,008,479 - 19,011,598 (-) | NCBI | Dog10K_Boxer_Tasha | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 6 | 17,565,289 - 17,568,408 (-) | NCBI | ROS_Cfam_1.0 | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 6 | 17,565,294 - 17,572,827 (-) | Ensembl | | | | ROS_Cfam_1.0 Ensembl | UMICH_Zoey_3.1 | 6 | 17,365,548 - 17,368,667 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 6 | 17,283,232 - 17,286,351 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 6 | 17,596,052 - 17,599,171 (-) | NCBI | UU_Cfam_GSD_1.0 | UU_Cfam_GSD_1.0 | | |
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Tmem265 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
| Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024409344 | 125,033,365 - 125,037,470 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936501 | 13,131,255 - 13,135,324 (+) | Ensembl | | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936501 | 13,131,267 - 13,135,328 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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TMEM265 (Chlorocebus sabaeus - green monkey) |
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Tmem265 (Heterocephalus glaber - naked mole-rat) |
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Tmem265 (Rattus rattus - black rat) |
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Expression
RNA-SEQ Expression
alimentary part of gastrointestinal system
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10
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4
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23
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3
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2
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5
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14
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12
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23
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3
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6
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3
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{{data.value}}
Sequence
| Ensembl Acc Id: |
ENSSSCT00000056375 ⟹ ENSSSCP00000054046 |
| Type: |
CODING |
| Position: |
| Pig Assembly | Chr | Position (strand) | Source |
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Sscrofa11.1 Ensembl | 3 | 17,660,254 - 17,688,586 (-) | Ensembl |
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| Ensembl Acc Id: |
ENSSSCT00000103024 ⟹ ENSSSCP00000077325 |
| Type: |
CODING |
| Position: |
| Pig Assembly | Chr | Position (strand) | Source |
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Sscrofa11.1 Ensembl | 3 | 17,660,255 - 17,663,543 (-) | Ensembl |
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| RefSeq Acc Id: |
NM_001304279 ⟹ NP_001291208 |
| RefSeq Status: |
VALIDATED |
| Type: |
CODING |
| Position: |
| Pig Assembly | Chr | Position (strand) | Source |
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Sscrofa11.1 | 3 | 17,660,249 - 17,663,707 (-) | NCBI |
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| Sequence: |
AATTTTCCTCCTCTCTCTTCTGTTCCCTTGGTTCCTGAGCCTCAGAGCTATCTGGTGCCTCAGA CTGTTCCCTGCTTTTATCCCTCTTGCGCAGGTGCTTTCACTCCCTTTTCAGAAGGCAGGCATCC TACCTCCAGTTGCTCCATCCTTTGCTTTCCCTTGCTTTCCTCCATCTAGCCAAACTGGTTTGAA TCAGCCACACCCCCTTCCGAGTTTCTGGGGCTCCTCAGATGGTGGCTGGCCACCCAACCCCACC CCTGGGCTTGGCTTGGAGCCCTGAGTCAGCTCCCTCTCCACCCAAGCCAAATCAAACCTGAGGC AGGAGCCGAAACTCTCAGTCCCTCGAGGCCTTATTGCCAGGTGATGGAGGACGAGGAGAAAGCA GTGGAGATCTTGGTGACCAACACGGAAGCTGCTCATTCTCCATTCCCCATTCGCTGCTGTTGGT TCCGTCTCCGCTGCTTGGCAGCTACTAGCGTTATATGTGGCTGCTCTTGCCTGGGAGTTGTGGC CCTTGTGTTTGCCATCAAGGCAGAAGAGCGGCATAAGACAGGCCGGTTGGAGGAGGCAGTGCAC TGGGGGGCCCGGGCCCGGAGGTACATCCTGGCCAGCTTTGCTGTCTGGCTTGCAGTCCTCGTTC TGGGCCCCCTGCTTCTATGGCTGCTCTCCTACGTCATCGCCCAGGCTGAGTGACCCTGGGTGGC CTCTGCTGAGAGTCAGCTGAGACCTCCTGGTTCCTGCAGTGCTAGGGTCTGGTGCCAGCAGTGG TACTTCCTGACTGGAAGGATGGTGCTTCTCTCAAAGGTCTTTGGAAGAGCTCTTAAGTCCTTTA CAAATGGCAGCAGCTGAGACCGATGAGGGGAGGTCAACCTGCTCTGTTCTTTCAGTGCCCACCG TCCCCTATTCCCCCCAACCTACTCCTTTCCTAGAGGCCTCTAGGTGGTGTGGTTGAAGACCAGG CCTGATTTTATTAGTATTTGTTTTATAATAAAAATCTTTTTTAGTGGCAAAA
hide sequence
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| RefSeq Acc Id: |
XM_013992348 ⟹ XP_013847802 |
| Type: |
CODING |
| Position: |
| Pig Assembly | Chr | Position (strand) | Source |
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Sscrofa11.1 | 3 | 17,660,249 - 17,663,879 (-) | NCBI |
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| Sequence: |
CATTATTTTTCTCCTTGCTCTTGCTCTTGCTGAGACCCTAGTACCTCATCTCTAACCCAAAATT ATGTGTCTTTGAGGCAGAAATCTGCACCCAAGAAGAGGGGGAATGGCAGATCTGATCTGGTAGG GGTACCTTTCTCTAAAGTTTCCATTTTAAGTCATACAGACTCATAATTTTCCTCCTCTCTCTTC TGTTCCCTTGGTTCCTGAGCCTCAGAGCTATCTGGTGCCTCAGACTGTTCCCTGCTTTTATCCC TCTTGCGCAGGTGCTTTCACTCCCTTTTCAGAAGGCAGGCATCCTACCTCCAGTTGCTCCATCC TTTGCTTTCCCTTGCTTTCCTCCATCTAGCCAAACTGGTTTGAATCAGCCACACCCCCTTCCGA GTTTCTGGGGCTCCTCAGATGGTGGCTGGCCACCCAACCCCACCCCTGGGCTTGGCTTGGAGCC CTGAGTCAGCTCCCTCTCCACCCAAGCCAAATCAAACCTGAGGCAGGAGCCGAAACTCTCAGTC CCTCGAGGCCTTATTGCCAGGTAAGAGTCCCTGTATGTTTTTGTATTTTCTCTCCTCTCAATTC CCTGGACCCTCTCCTTGAGTTTTCCCCATGATGGCGCTATCTGTTTACCTCATCTGAGTTCTTT CCTCATGTCCATTTTCCTGCAGATTTGTGGCATATATGGTTTTTTGTTAATTTGCTTATCTTGC CTCTTTTCTTTCCCCTCTCCTATCCTTTGTTATTTGTGGTCAGAGAACTGCAAATGGTTTCATT TTGTCTAAGGCATAGGGAAATGGTTGGAGGTGAAGGTTAGAAAGACGGTTTGATGCCAAAGCTC CAAGGGCTTGAGAAATAGGGAGCTGAGAAATTACAAGGTCAGGCATCATTATGCAGGTTTCTGT GGGTTATGAAGTCATTGGGACTCAAGGTGCTAATCTGATTGTGTTGTATGATCTGGGTTAAAAT AGGAGGTGGAAGAGAGTACAGCAAGAGAGGCCCTGATTTAGGGAGGTGAGGTCTTTCTGATGTT CAGTTTCCCCAGCTATATAGAGCTTAGATGGGTAGTTTTCCCCTTCCTTTCCCCCATCCCCAGA ACTGTTTTCATATGCAATGGCTGCCTTGTTTGAAGTGGGGTGTAGGGCCTAGGGTGCCTTTCTC TGATCGCTCCATACTCGAGGGCAGCCTCTAAGGAACTTTAAGGAATTTTAGGGCCTTTTGAAGT ACAGATTAAAGTCACTCACTTGAGTAGTCACAGATTCCTATCAGGTTTTGAGAAACACTCTACT GCTTCTCAGTGTGCACTCGTCATTTTGCTTTTCCCCTCTTGTCAAAACAGTAAGTAGTACATGT AGACGATGCTATGTCCATACCAACCTGCCTTCAGAGACTTGGAACTGGGAGTTCTCCTGTGGCT CTGTGGGTTAAGGATCGGCATTGTCACTGCAGCAGCTCGAGTCGCTCCATCTAGCCAAACTGGG AACTTCCACGTGCAGGGAGCACTGCCAAAAAAAAGAAAGAAAAGAAAGACTCAGAACCTTAGGC TGAGGAGAAAGAATTCCAGCCACACATTTCCTCTCTTGGTCTGAGTCACTAGGGAATTCCCCAG TAAGGCGGCATTCCTGAGAGTTGGGCTAGACCACGGGGACATGATCAGAGAGAGGGATAGAGTC TGAGCAAGACAGGCCAAGGGTTCAGTTGCTGGACTTACACGTGTCTCGACTATCGCCCACAGGT GATGGAGGACGAGGAGAAAGCAGTGGAGATCTTGGTGACCAACACGGAAGCTGCTCATTCTCCA TTCCCCATTCGCTGCTGTTGGTTCCGTCTCCGCTGCTTGGCAGCTACTAGCGTTATATGTGGCT GCTCTTGCCTGGGAGTTGTGGCCCTTGTGTTTGCCATCAAGGCAGAAGAGCGGCATAAGACAGG CCGGTTGGAGGAGGCAGTGCACTGGGGGGCCCGGGCCCGGAGGTACATCCTGGCCAGCTTTGCT GTCTGGCTTGCAGTCCTCGTTCTGGGCCCCCTGCTTCTATGGCTGCTCTCCTACGTCATCGCCC AGGCTGAGTGACCCTGGGTGGCCTCTGCTGAGAGTCAGCTGAGACCTCCTGGTTCCTGCAGTGC TAGGGTCTGGTGCCAGCAGTGGTACTTCCTGACTGGAAGGATGGTGCTTCTCTCAAAGGTCTTT GGAAGAGCTCTTAAGTCCTTTACAAATGGCAGCAGCTGAGACCGATGAGGGGAGGTCAACCTGC TCTGTTCTTTCAGTGCCCACCGTCCCCTATTCCCCCCAACCTACTCCTTTCCTAGAGGCCTCTA GGTGGTGTGGTTGAAGACCAGGCCTGATTTTATTAGTATTTGTTTTATAATAAAAATCTTTTTT AGTGGCAAAA
hide sequence
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| RefSeq Acc Id: |
XP_013847802 ⟸ XM_013992348 |
| - Peptide Label: |
isoform X1 |
| - UniProtKB: |
A0A287BBZ1 (UniProtKB/TrEMBL), A0A4X1TQ89 (UniProtKB/TrEMBL), A0A8D1T421 (UniProtKB/TrEMBL) |
| - Sequence: |
MEDEEKAVEILVTNTEAAHSPFPIRCCWFRLRCLAATSVICGCSCLGVVALVFAIKAEERHKTG RLEEAVHWGARARRYILASFAVWLAVLVLGPLLLWLLSYVIAQAE
hide sequence
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| RefSeq Acc Id: |
NP_001291208 ⟸ NM_001304279 |
| - UniProtKB: |
A0A287BBZ1 (UniProtKB/TrEMBL), A0A4X1TQ89 (UniProtKB/TrEMBL), A0A8D1T421 (UniProtKB/TrEMBL) |
| - Sequence: |
MEDEEKAVEILVTNTEAAHSPFPIRCCWFRLRCLAATSVICGCSCLGVVALVFAIKAEERHKTG RLEEAVHWGARARRYILASFAVWLAVLVLGPLLLWLLSYVIAQAE
hide sequence
|
| Ensembl Acc Id: |
ENSSSCP00000054046 ⟸ ENSSSCT00000056375 |
| Ensembl Acc Id: |
ENSSSCP00000077325 ⟸ ENSSSCT00000103024 |
Additional Information
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