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Gene: LOC102164714 (uncharacterized LOC102164714) Sus scrofa

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Symbol:

LOC102164714

Name:

uncharacterized LOC102164714

RGD ID:

14031532

Description:

Type:

ncrna

RefSeq Status:

MODEL

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	12	59,158,071 - 59,181,467 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	62,285,934 - 62,307,872 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

References

Genomics

Variants

Variants in LOC102164714
1143 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XR_001299414	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000083	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

XR_001299414

Type:

NON-CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	12	59,158,071 - 59,181,467 (+)	NCBI

Sequence:

show sequence

AAAAAAAAAAAAAAACCTGGGCATACTTAACGTAAATTCTAGAGAGAGATGGGAGAGAGGGGTT
CAGAGTCTGGAAAGTGGGTAGTGCTGGCCTTGGAGTGAAGAAAGGGTCAGACTTGGGGTAAATG
AGGCGGACAAGCGAGAGCCTGCACCTTTACTTCTCCCAAAACTTGGTCCAAAGCCTGGGCTGGG
CCTGTTTACTGGTTAGAAGCAGCCTCTCTGAGCAGCTTTGCGTCTGAGTCTGACAGAAAAATAG
AAATAAGCCAGCTTAGGAGTCAGGCTTCCTGGAACAAGGGAGACAGACTGGAGACTAGCCGAGA
TGGCCCTGGCCTTTAGAGTGCCTTCTGCAGGAGAAGGGGACCAAAGTCCTGCTGGGTGGGTGGA
GGCTGCCTGGCCTGGGAGAATCTTCTCAAGGAGCTGCCCCTTCCCACACTGCCTCTGCACCCCA
GAGGCCACTGCTCAGCCAGGCCCACATGTGGGGCTTCTCTCTCAGGACCCAAAATAGCTACACC
CAGGCTCGGGGTCAAATCTGGGAGCCCAGGCCCAAGCCCAGAGCCTCCGGGGAGTTTCCCCAAC
TTGAGCTGGCGCTGGGCCCGTTTTCAACAGTCCCAGCTATTGGCTAATGGATGTCCGATTTTAC
TATTAAAAGAAAGATATTCTGTCTTCTGGAAGACAAGAATAGAGAAAGCGGAGCGGAGAGGCAG
AATTGAGATAAAGACGCCTCCGGTCGCAGAGACGCAGTTGAGAGGGGTAACAAAGACACAGCCC
GAGGCCTGAGATCCAGACAGGCAGGCCAGAACCAGCGACGGCAGCCACGACAGGAGAAACACCA
GACGCAGACAGAATCAGCCTGGCAAGGATGCATCGGATAGCCTGACTGAGACCAAGGATGACCT
GGGCTGCGGTCGAGCCAAAGGACCTGCAGAGGTTTCAACGGGCTCGCCTTTGCGCAGCCTTGCC
CACTGCGGGAATCCCGGGCTGTGCCTTAGCCACGCCCACACCGGGACTCCTCCTCTCCGCGCCT
TAGCCACACCCCTCATGGGACCCCGCCTCCATCGCGACTCAGCCACGCCTCCACCCCATGACTC
CTCCCCTCCGCGCCTCAGCCGCGCCCAAACTTGGGAACTCCACCCCCCGCGCCTCAGCGTCGCT
CCCAGCCCGGGTTACCCAGTTCCCTCCGTTTGCACCCCCACCGCCCCTGCCCGGGTGAGTCCCC
GCCCCTTTCCCCGACCCGCCACCAGGTGTCCGCGGTCCCGCTGGGGCTCCCAGCTGCTTGAAGA
CAAGCCAGGTACCAGCTGACTAAGAACAACTTATGGAAGAAACATTTAACCTGGAAACTTTTAT
CCATTGCCCCCTCCTTTGGGGAACCTAAGGCAGTGGGCTGCAGCAAGAAGAGCAGGAGACGGGA
TCCCGCATGACTTGACCGGATTCCCAGCTGGATTTCACGACAGCCCCGGGACTGTGTATTATTA
ACCCTAACTTCCCTCTCTGCGAAGAACAATCGTAGACCCGGCGTCTTCCTGCCTTGTCGAATTG
GGAGTCCTAAATTTAGGCAGGTCATTTGGCACTGAGCCGGTAGTGAGAAAATGTCATTTACCAT
CGCTTTCTCTTTGCTGTTTTGCTTGATTTCCTTTGCTGTTTACAGAGCTGCCCTTGGAAAGACT
GGTATTTTCTTTTCTTCCAGTACCTTTCTAGGTAATTCTCAAACTTAGTCAGTGAACCAAGAAA
TTGAGGCTTATCATACCAATTTCCCAACCTGTTAGAAAATTATACTAGGTATCCAGAAATAACT
AGGCAATAGTAGCTATTATTGCTTGGATAAATAAATTAATCTTGCACTATTCTCTTAGACTCCA
AGGAGCTATTCATTTCTTTTTCTGGTTACTATTGACTAATTCCCAATTTGTTTTTTAGGGTCCA
GAATTTAATCTGAGATTTCAGTGACATTTAAAATTTTTATTTATTGTTTTTAATATTTGCTGTC
AAGTGAAAAGAACAGAAGAGCTACACAAAAGATATAGATAAGTTGATGTGTTATTTTTGTTTGC
TGTGCCTCATTATGGGAATTGTCTTGAAAGCAGCCCTTTGCACCTATTTTGCTGTTGTGGGGTT
GGCTAGTATATCTTCTGATGGTTAGTAAATCTCTGATGCATAAAGGAA

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Additional Information

External Database Links

Database	Acc Id	Source(s)
NCBI Gene	LOC102164714	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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