LOC100155532 (olfactory receptor 49-like) - Rat Genome Database

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Gene: LOC100155532 (olfactory receptor 49-like) Sus scrofa
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Symbol: LOC100155532
Name: olfactory receptor 49-like
RGD ID: 14016593
Description: ENCODES a protein that exhibits G protein-coupled receptor activity (inferred); olfactory receptor activity (inferred); INVOLVED IN detection of chemical stimulus involved in sensory perception of smell (inferred); G protein-coupled receptor signaling pathway (inferred); sensory perception of smell (inferred); FOUND IN membrane (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1776,334,630 - 76,336,037 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2781,574,002 - 81,606,928 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
membrane  (IEA)
plasma membrane  (IBA,IEA)

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Variants

.
Variants in LOC100155532
43 total Variants

Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_021100005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AEMK02000056 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XM_021100005   ⟹   XP_020955664
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1776,334,630 - 76,336,037 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_020955664 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSSCP00000002235
  ENSSSCP00000002235.2
  ENSSSCP00025044264.1
  ENSSSCP00035031028.1
  ENSSSCP00045004360.1
  ENSSSCP00055026011.1
  ENSSSCP00065011633.1
  ENSSSCP00070035241.1
RefSeq Acc Id: XP_020955664   ⟸   XM_021100005
- UniProtKB: A0A4X1V0V5 (UniProtKB/TrEMBL),   F1S9B4 (UniProtKB/TrEMBL)
- Sequence:
Protein Domains
G-protein coupled receptors family 1 profile


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000056092 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00025072924 UniProtKB/TrEMBL
  ENSSSCG00035056886 UniProtKB/TrEMBL
  ENSSSCG00045003870 UniProtKB/TrEMBL
  ENSSSCG00055016541 UniProtKB/TrEMBL
  ENSSSCG00065021337 UniProtKB/TrEMBL
  ENSSSCG00070021132 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000002287 ENTREZGENE
  ENSSSCT00000002287.4 UniProtKB/TrEMBL
  ENSSSCT00025100304.1 UniProtKB/TrEMBL
  ENSSSCT00035076040.1 UniProtKB/TrEMBL
  ENSSSCT00045006414.1 UniProtKB/TrEMBL
  ENSSSCT00055032657.1 UniProtKB/TrEMBL
  ENSSSCT00065028393.1 UniProtKB/TrEMBL
  ENSSSCT00070041955.1 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
  Olfact_rcpt_6C-like UniProtKB/TrEMBL
NCBI Gene LOC100155532 ENTREZGENE
PANTHER OLFACTORY RECEPTOR UniProtKB/TrEMBL
  OLFACTORY RECEPTOR 49 UniProtKB/TrEMBL
Pfam 7tm_4 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A4X1V0V5 ENTREZGENE, UniProtKB/TrEMBL
  F1S9B4 ENTREZGENE, UniProtKB/TrEMBL