LOC110259737 (olfactory receptor 2T1) - Rat Genome Database

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Gene: LOC110259737 (olfactory receptor 2T1) Sus scrofa
Analyze
No known orthologs.
Symbol: LOC110259737 (Ensembl: OR2T1)
Name: olfactory receptor 2T1 (Ensembl:olfactory receptor family 2 subfamily T member 1)
RGD ID: 13873698
Description: ENCODES a protein that exhibits G protein-coupled receptor activity (inferred); olfactory receptor activity (inferred); INVOLVED IN detection of chemical stimulus involved in sensory perception of smell (inferred); G protein-coupled receptor signaling pathway (inferred); sensory perception of smell (inferred); FOUND IN membrane (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Alliance Orthologs
More Info homologs ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl253,186,402 - 53,187,358 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1253,186,402 - 53,187,485 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
membrane  (IEA)
plasma membrane  (IBA,IEA)

Molecular Function

References
Additional References at PubMed
PMID:22301074  


Genomics

Variants

.
Variants in LOC110259737
74 total Variants

Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_021085480 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AEMK02000010 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSSSCT00000043988   ⟹   ENSSSCP00000064980
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl253,186,402 - 53,187,358 (-)Ensembl
RefSeq Acc Id: XM_021085480   ⟹   XP_020941139
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1253,186,402 - 53,187,485 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_020941139 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSSCP00000064980
  ENSSSCP00000064980.1
  ENSSSCP00035009761.1
  ENSSSCP00035037050.1
  ENSSSCP00055025053.1
  ENSSSCP00070021210.1
RefSeq Acc Id: XP_020941139   ⟸   XM_021085480
- UniProtKB: A0A4X1U0A1 (UniProtKB/TrEMBL),   A0A5G2QLR0 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSSCP00000064980   ⟸   ENSSSCT00000043988
Protein Domains
G-protein coupled receptors family 1 profile


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000042100 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00035019849 UniProtKB/TrEMBL
  ENSSSCG00035065823 UniProtKB/TrEMBL
  ENSSSCG00055015979 UniProtKB/TrEMBL
  ENSSSCG00070013129 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000043988 ENTREZGENE
  ENSSSCT00000043988.2 UniProtKB/TrEMBL
  ENSSSCT00035025744.1 UniProtKB/TrEMBL
  ENSSSCT00035088659.1 UniProtKB/TrEMBL
  ENSSSCT00055031465.1 UniProtKB/TrEMBL
  ENSSSCT00070025583.1 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
NCBI Gene LOC110259737 ENTREZGENE
PANTHER OLFACTORY RECEPTOR UniProtKB/TrEMBL
Pfam 7tm_4 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A4X1U0A1 ENTREZGENE, UniProtKB/TrEMBL
  A0A5G2QLR0 ENTREZGENE, UniProtKB/TrEMBL