LOC111091558 (uncharacterized LOC111091558) - Rat Genome Database

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Pathways
Gene: LOC111091558 (uncharacterized LOC111091558) Canis lupus familiaris
Analyze
Symbol: LOC111091558
Name: uncharacterized LOC111091558
RGD ID: 13280141
Description:
Type: ncrna
RefSeq Status: MODEL
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12135,158,015 - 35,169,000 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2134,721,170 - 34,730,261 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02136,033,600 - 36,042,663 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
UMICH_Zoey_3.12135,294,619 - 35,303,709 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02135,472,497 - 35,481,565 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02135,759,036 - 35,768,106 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
JBrowse:




References

Genomics

Variants

.
Variants in LOC111091558
173 total Variants

Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XR_002617302 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002617303 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002617304 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002617305 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005298790 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005298791 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005298792 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005313223 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005341982 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005341983 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005341984 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005375753 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005375754 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005375755 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005409714 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005409715 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005409716 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000244 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000059 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000057 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XR_002617302
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12135,163,568 - 35,168,984 (-)NCBI
Dog10K_Boxer_Tasha2134,726,727 - 34,730,243 (-)NCBI
Sequence:
RefSeq Acc Id: XR_002617303
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12135,158,016 - 35,169,000 (-)NCBI
Dog10K_Boxer_Tasha2134,721,170 - 34,730,258 (-)NCBI
Sequence:
RefSeq Acc Id: XR_005298790
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02136,039,161 - 36,042,645 (-)NCBI
RefSeq Acc Id: XR_005298791
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02136,033,600 - 36,042,660 (-)NCBI
RefSeq Acc Id: XR_005298792
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02136,033,600 - 36,042,663 (-)NCBI
RefSeq Acc Id: XR_005313223
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha2134,721,170 - 34,730,261 (-)NCBI
RefSeq Acc Id: XR_005341982
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12135,300,175 - 35,303,691 (-)NCBI
RefSeq Acc Id: XR_005341983
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12135,294,619 - 35,303,706 (-)NCBI
RefSeq Acc Id: XR_005341984
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12135,294,619 - 35,303,709 (-)NCBI
RefSeq Acc Id: XR_005375753
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02135,764,590 - 35,768,104 (-)NCBI
RefSeq Acc Id: XR_005375754
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02135,759,036 - 35,768,106 (-)NCBI
RefSeq Acc Id: XR_005375755
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02135,759,036 - 35,768,106 (-)NCBI
RefSeq Acc Id: XR_005409714
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02135,478,047 - 35,481,563 (-)NCBI
RefSeq Acc Id: XR_005409715
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02135,472,497 - 35,481,565 (-)NCBI
RefSeq Acc Id: XR_005409716
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02135,472,497 - 35,481,565 (-)NCBI

Additional Information

Database Acc Id Source(s)
NCBI Gene LOC111091558 ENTREZGENE