RGD1311300 (similar to T cell receptor V delta 6) - Rat Genome Database

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Gene: RGD1311300 (similar to T cell receptor V delta 6) Rattus norvegicus
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Symbol: RGD1311300
Name: similar to T cell receptor V delta 6
RGD ID: 1311300
Description: INTERACTS WITH bis(2-ethylhexyl) phthalate; oxaliplatin; topotecan
Type: protein-coding
Previously known as: LOC364378; MGC116392
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
NCBI Annotation Information: Genome Annotation Status: not in current annotation release
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
RGSC_v3.41531,929,792 - 32,194,317 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11531,945,491 - 32,210,017 (+)NCBI
Celera1526,909,740 - 27,169,027 (+)NCBICelera
Cytogenetic Map15p13NCBI


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. GOA pipeline RGD automated data pipeline
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10866119   PMID:10941843   PMID:11169397   PMID:12477932  


Genomics

Markers in Region
AI501734  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21527,586,563 - 27,586,747 (+)MAPPERmRatBN7.2
Rnor_6.01532,777,417 - 32,777,600NCBIRnor6.0
Rnor_5.01536,588,237 - 36,588,420UniSTSRnor5.0
RGSC_v3.41532,193,992 - 32,194,175UniSTSRGSC3.4
Celera1527,168,702 - 27,168,885UniSTS
RH 3.4 Map15215.0UniSTS
Cytogenetic Map15p13UniSTS


Expression


Sequence

Nucleotide Sequences
GenBank Nucleotide AF196193 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF196194 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF196195 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF196196 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF196197 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF196198 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF196199 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF196209 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF196210 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF196211 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF196212 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF196213 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF196214 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF196215 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF196216 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF196217 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF196218 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF196219 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF196220 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF196221 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF196222 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF196223 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF196224 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF196225 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF196226 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF196227 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF196228 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF196230 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF196231 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF196232 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF196233 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF196235 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF196236 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF196237 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF196239 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF196240 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF196242 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF196243 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF196244 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF196247 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF196266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF196267 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF259788 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF259789 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ249228 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC099216 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Protein Sequences
GenBank Protein AAF26850 (Get FASTA)   NCBI Sequence Viewer  
  AAF26851 (Get FASTA)   NCBI Sequence Viewer  
  AAF26852 (Get FASTA)   NCBI Sequence Viewer  
  AAF26853 (Get FASTA)   NCBI Sequence Viewer  
  AAF26854 (Get FASTA)   NCBI Sequence Viewer  
  AAF26855 (Get FASTA)   NCBI Sequence Viewer  
  AAF26862 (Get FASTA)   NCBI Sequence Viewer  
  AAF26863 (Get FASTA)   NCBI Sequence Viewer  
  AAF26864 (Get FASTA)   NCBI Sequence Viewer  
  AAF26865 (Get FASTA)   NCBI Sequence Viewer  
  AAF26866 (Get FASTA)   NCBI Sequence Viewer  
  AAF26867 (Get FASTA)   NCBI Sequence Viewer  
  AAF26868 (Get FASTA)   NCBI Sequence Viewer  
  AAF26869 (Get FASTA)   NCBI Sequence Viewer  
  AAF26870 (Get FASTA)   NCBI Sequence Viewer  
  AAF26871 (Get FASTA)   NCBI Sequence Viewer  
  AAF26872 (Get FASTA)   NCBI Sequence Viewer  
  AAF26873 (Get FASTA)   NCBI Sequence Viewer  
  AAF26874 (Get FASTA)   NCBI Sequence Viewer  
  AAF26875 (Get FASTA)   NCBI Sequence Viewer  
  AAF26876 (Get FASTA)   NCBI Sequence Viewer  
  AAF26877 (Get FASTA)   NCBI Sequence Viewer  
  AAF26878 (Get FASTA)   NCBI Sequence Viewer  
  AAF26879 (Get FASTA)   NCBI Sequence Viewer  
  AAF26881 (Get FASTA)   NCBI Sequence Viewer  
  AAF26882 (Get FASTA)   NCBI Sequence Viewer  
  AAF26884 (Get FASTA)   NCBI Sequence Viewer  
  AAF26885 (Get FASTA)   NCBI Sequence Viewer  
  AAF26887 (Get FASTA)   NCBI Sequence Viewer  
  AAF26888 (Get FASTA)   NCBI Sequence Viewer  
  AAF26889 (Get FASTA)   NCBI Sequence Viewer  
  AAF26891 (Get FASTA)   NCBI Sequence Viewer  
  AAF26903 (Get FASTA)   NCBI Sequence Viewer  
  AAG59704 (Get FASTA)   NCBI Sequence Viewer  
  AAG59705 (Get FASTA)   NCBI Sequence Viewer  
  AAH99216 (Get FASTA)   NCBI Sequence Viewer  
  CAB58999 (Get FASTA)   NCBI Sequence Viewer  


Additional Information

Database Acc Id Source(s)
IMAGE_CLONE IMAGE:7384680 IMAGE-MGC_LOAD
MGC_CLONE MGC:116392 IMAGE-MGC_LOAD
NCBI Gene 364378 ENTREZGENE
PhenoGen RGD1311300 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2005-12-06 RGD1311300  similar to T cell receptor V delta 6  RGD1311300_predicted  similar to T cell receptor V delta 6 (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-20 RGD1311300_predicted  similar to T cell receptor V delta 6 (predicted)  LOC364378_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-12 LOC364378_predicted  similar to T cell receptor V delta 6 (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL