LOC106559908 (uncharacterized LOC106559908) - Rat Genome Database

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Pathways
Gene: LOC106559908 (uncharacterized LOC106559908) Canis lupus familiaris
Analyze
Symbol: LOC106559908
Name: uncharacterized LOC106559908
RGD ID: 12148314
Description:
Type: ncrna
RefSeq Status: MODEL
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.117466,112 - 473,687 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha17455,524 - 463,095 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.017525,455 - 533,028 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
UMICH_Zoey_3.117450,042 - 457,609 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.017469,979 - 477,194 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.017475,265 - 482,838 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
JBrowse:




References

Genomics

Variants

.
Variants in LOC106559908
161 total Variants

Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
6 5 5 23 22 16 6 6 6 6 33 22 12 14 10

Sequence

Nucleotide Sequences
RefSeq Transcripts XR_001318040 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001318041 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001318042 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001318043 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001318044 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001318045 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001318046 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002614903 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002614904 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005311353 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005311354 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005311355 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005311356 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005311357 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005311358 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005338156 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005338157 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005338158 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005338159 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005338160 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005338161 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005338162 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005338163 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005338164 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005371946 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005371947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005371948 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005371949 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005371950 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005371951 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005371952 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005371953 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005371954 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005371955 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005406046 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005406047 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005406048 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005406049 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005406050 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005406051 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005406052 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005406053 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005406054 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005439702 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005439703 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005439704 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005439705 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005439706 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005439707 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005439708 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005439709 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005439710 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005439711 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000017 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000195 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000035 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000359 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000017 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XR_001318043
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.117466,112 - 473,687 (-)NCBI
Dog10K_Boxer_Tasha17455,524 - 463,095 (-)NCBI
Sequence:
RefSeq Acc Id: XR_001318044
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.117466,112 - 473,687 (-)NCBI
Dog10K_Boxer_Tasha17455,524 - 463,095 (-)NCBI
Sequence:
RefSeq Acc Id: XR_002614903
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.117466,112 - 473,687 (-)NCBI
Dog10K_Boxer_Tasha17455,524 - 463,095 (-)NCBI
Sequence:
RefSeq Acc Id: XR_002614904
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.117466,112 - 473,687 (-)NCBI
Dog10K_Boxer_Tasha17455,524 - 463,095 (-)NCBI
Sequence:
RefSeq Acc Id: XR_005311353
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha17455,524 - 463,095 (-)NCBI
RefSeq Acc Id: XR_005311354
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha17455,524 - 463,095 (-)NCBI
RefSeq Acc Id: XR_005311355
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha17455,524 - 463,095 (-)NCBI
RefSeq Acc Id: XR_005311356
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha17455,524 - 463,095 (-)NCBI
RefSeq Acc Id: XR_005311357
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha17455,524 - 463,095 (-)NCBI
RefSeq Acc Id: XR_005311358
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha17455,524 - 463,095 (-)NCBI
RefSeq Acc Id: XR_005338156
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.117450,042 - 457,609 (-)NCBI
RefSeq Acc Id: XR_005338157
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.117450,042 - 457,609 (-)NCBI
RefSeq Acc Id: XR_005338158
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.117450,042 - 457,609 (-)NCBI
RefSeq Acc Id: XR_005338159
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.117450,042 - 457,609 (-)NCBI
RefSeq Acc Id: XR_005338160
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.117450,042 - 457,609 (-)NCBI
RefSeq Acc Id: XR_005338161
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.117450,042 - 457,609 (-)NCBI
RefSeq Acc Id: XR_005338162
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.117450,042 - 457,609 (-)NCBI
RefSeq Acc Id: XR_005338163
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.117450,042 - 457,609 (-)NCBI
RefSeq Acc Id: XR_005338164
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.117450,042 - 457,609 (-)NCBI
RefSeq Acc Id: XR_005371946
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.017475,265 - 482,838 (-)NCBI
RefSeq Acc Id: XR_005371947
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.017475,265 - 482,838 (-)NCBI
RefSeq Acc Id: XR_005371948
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.017475,265 - 482,838 (-)NCBI
RefSeq Acc Id: XR_005371949
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.017475,265 - 482,838 (-)NCBI
RefSeq Acc Id: XR_005371950
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.017475,265 - 482,838 (-)NCBI
RefSeq Acc Id: XR_005371951
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.017475,265 - 482,838 (-)NCBI
RefSeq Acc Id: XR_005371952
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.017475,265 - 482,838 (-)NCBI
RefSeq Acc Id: XR_005371953
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.017475,265 - 482,838 (-)NCBI
RefSeq Acc Id: XR_005371954
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.017475,265 - 482,838 (-)NCBI
RefSeq Acc Id: XR_005371955
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.017475,265 - 482,838 (-)NCBI
RefSeq Acc Id: XR_005406046
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.017469,979 - 477,193 (-)NCBI
RefSeq Acc Id: XR_005406047
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.017469,979 - 477,193 (-)NCBI
RefSeq Acc Id: XR_005406048
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.017469,979 - 477,193 (-)NCBI
RefSeq Acc Id: XR_005406049
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.017469,979 - 477,193 (-)NCBI
RefSeq Acc Id: XR_005406050
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.017469,979 - 477,194 (-)NCBI
RefSeq Acc Id: XR_005406051
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.017469,979 - 477,193 (-)NCBI
RefSeq Acc Id: XR_005406052
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.017469,979 - 477,193 (-)NCBI
RefSeq Acc Id: XR_005406053
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.017469,979 - 477,193 (-)NCBI
RefSeq Acc Id: XR_005406054
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.017469,979 - 477,193 (-)NCBI
RefSeq Acc Id: XR_005439702
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.017525,455 - 533,028 (-)NCBI
RefSeq Acc Id: XR_005439703
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.017525,455 - 533,028 (-)NCBI
RefSeq Acc Id: XR_005439704
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.017525,455 - 533,028 (-)NCBI
RefSeq Acc Id: XR_005439705
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.017525,455 - 533,028 (-)NCBI
RefSeq Acc Id: XR_005439706
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.017525,455 - 533,028 (-)NCBI
RefSeq Acc Id: XR_005439707
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.017525,455 - 533,028 (-)NCBI
RefSeq Acc Id: XR_005439708
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.017525,455 - 533,028 (-)NCBI
RefSeq Acc Id: XR_005439709
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.017525,455 - 533,028 (-)NCBI
RefSeq Acc Id: XR_005439710
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.017525,455 - 533,028 (-)NCBI
RefSeq Acc Id: XR_005439711
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.017525,455 - 533,028 (-)NCBI

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00845017049 ENTREZGENE
Ensembl Transcript ENSCAFT00845030175 ENTREZGENE
NCBI Gene LOC106559908 ENTREZGENE
RNAcentral URS00022B0390 RNACentral
  URS00022B5EDA RNACentral