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Gene: R3HDM4 (R3H domain containing 4) Canis lupus familiaris

Analyze

Symbol:

R3HDM4

Name:

R3H domain containing 4

RGD ID:

12120954

Description:

ENCODES a protein that exhibits nucleic acid binding (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

C20H19orf22; R3H domain-containing protein 4

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	R3HDM4 (R3H domain containing 4)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	R3hdm4 (R3H domain containing 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	R3hdm4 (R3H domain containing 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	R3hdm4 (R3H domain containing 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	R3HDM4 (R3H domain containing 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	R3hdm4 (R3H domain containing 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	R3HDM4 (R3H domain containing 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	R3HDM4 (R3H domain containing 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	R3hdm4 (R3H domain containing 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	R3hdm4 (R3H domain containing 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	20	57,761,100 - 57,769,656 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	20	57,760,909 - 57,769,105 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	20	57,563,079 - 57,571,673 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	20	58,503,366 - 58,511,900 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	20	58,503,160 - 58,511,349 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	20	57,558,210 - 57,566,745 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	20	58,037,856 - 58,046,464 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	20	58,240,857 - 58,249,400 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene Ontology Annotations Click to see Annotation Detail View

Molecular Function

nucleic acid binding (IEA)

References

Additional References at PubMed

PMID:22301074

Genomics

Comparative Map Data

R3HDM4
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	20	57,761,100 - 57,769,656 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	20	57,760,909 - 57,769,105 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	20	57,563,079 - 57,571,673 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	20	58,503,366 - 58,511,900 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	20	58,503,160 - 58,511,349 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	20	57,558,210 - 57,566,745 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	20	58,037,856 - 58,046,464 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	20	58,240,857 - 58,249,400 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

R3HDM4
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	896,503 - 913,219 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	19	896,503 - 913,245 (-)	Ensembl			hg38	GRCh38
GRCh37	19	896,503 - 913,219 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	847,503 - 864,200 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	19	847,502 - 864,200	NCBI
Celera	19	828,869 - 845,586 (-)	NCBI		Celera
Cytogenetic Map	19	p13.3	NCBI
HuRef	19	670,513 - 686,876 (-)	NCBI		HuRef
CHM1_1	19	895,123 - 912,814 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	19	859,232 - 875,957 (-)	NCBI		T2T-CHM13v2.0

R3hdm4
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	79,745,886 - 79,752,764 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	10	79,745,886 - 79,757,042 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	10	79,910,052 - 79,916,930 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	79,910,052 - 79,921,208 (-)	Ensembl			mm10	GRCm38
MGSCv37	10	79,372,798 - 79,379,675 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	10	79,313,181 - 79,320,040 (-)	NCBI		MGSCv36	mm8
Celera	10	80,924,863 - 80,931,740 (-)	NCBI		Celera
Cytogenetic Map	10	C1	NCBI
cM Map	10	39.72	NCBI

R3hdm4
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	10,441,032 - 10,448,143 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	7	10,440,772 - 10,448,143 (+)	Ensembl				GRCr8
mRatBN7.2	7	9,790,401 - 9,797,512 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	9,790,322 - 9,797,512 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	7	12,672,377 - 12,679,525 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	14,547,697 - 14,554,842 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	12,408,881 - 12,416,016 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd	7	13,189,103 - 13,196,238 (+)	NCBI		Dahl_SR_JrHsd
Lyon_Normotensive	7	13,352,573 - 13,359,702 (+)	NCBI		Lyon_Normotensive
Lyon_Hypertensive	7	13,427,399 - 13,434,537 (+)	NCBI		Lyon_Hypertensive
F344_StmMcwi	7	11,793,198 - 11,800,340 (+)	NCBI		F344_StmMcwi
Rnor_6.0	7	12,611,476 - 12,618,586 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	12,611,468 - 12,618,586 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	7	12,781,198 - 12,788,308 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	7	11,302,975 - 11,309,973 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	7	7,965,345 - 7,972,285 (+)	NCBI		Celera
RGSC_v3.1	7	11,301,478 - 11,309,971 (+)	NCBI
Cytogenetic Map	7	q11	NCBI

R3hdm4
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955495	6,919,236 - 6,936,128 (+)	Ensembl
ChiLan1.0	NW_004955495	6,926,619 - 6,936,128 (+)	NCBI	ChiLan1.0	ChiLan1.0

R3HDM4
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	20	5,227,576 - 5,244,164 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	19	4,466,969 - 4,483,481 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	19	219,000 - 235,541 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	19	868,192 - 874,301 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	868,192 - 877,925 (-)	Ensembl			panPan2	panpan1.1

R3hdm4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	217,453,435 - 217,461,602 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936588	372,971 - 378,538 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936588	373,177 - 382,018 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

R3HDM4
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	77,479,273 - 77,489,105 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	2	77,479,259 - 77,489,106 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	77,508,534 - 77,518,363 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

R3HDM4
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	643,058 - 662,407 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	6	644,005 - 662,338 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666081	8,255,189 - 8,272,039 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

R3hdm4
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624828	7,682,754 - 7,692,778 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624828	7,682,770 - 7,691,215 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

R3hdm4
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	1	154,958,671 - 154,965,725 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in R3HDM4
169 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_038429362	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038504886	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038568045	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038632154	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_850107	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000020	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000236	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000058	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000291	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000020	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000031268 ⟹ ENSCAFP00000029098

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	20	57,760,909 - 57,769,105 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000061381 ⟹ ENSCAFP00000052828

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	20	57,760,909 - 57,767,163 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000082220 ⟹ ENSCAFP00000044121

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	20	57,760,909 - 57,768,179 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845025823 ⟹ ENSCAFP00845020346

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	20	58,503,160 - 58,511,349 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845025839 ⟹ ENSCAFP00845020360

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	20	58,503,160 - 58,510,423 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845025853 ⟹ ENSCAFP00845020371

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	20	58,503,160 - 58,509,407 (+)	Ensembl

RefSeq Acc Id:

XM_038429362 ⟹ XP_038285290

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	20	58,503,366 - 58,511,900 (+)	NCBI

RefSeq Acc Id:

XM_038504886 ⟹ XP_038360814

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	20	57,558,210 - 57,566,745 (+)	NCBI

RefSeq Acc Id:

XM_038568045 ⟹ XP_038423973

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	20	58,240,857 - 58,249,400 (+)	NCBI

RefSeq Acc Id:

XM_038632154 ⟹ XP_038488082

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	20	58,037,856 - 58,046,464 (+)	NCBI

RefSeq Acc Id:

XM_850107 ⟹ XP_855200

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	20	57,761,100 - 57,769,656 (+)	NCBI
Dog10K_Boxer_Tasha	20	57,563,079 - 57,571,673 (+)	NCBI

Sequence:

show sequence

CCTGGGCGCCCGTCACTTCCTGCACGGTCGCGAGAAGGCCCTGCCGGGCGGCGGCGACAACAGC
AGCCGGGCCATGGTCGCGCTGGAGAACCCGGAGGGCAGCTTGGAGGAGGCGGCGGCGGCGGTGG
GAAGCCCCCCGGGCGGGCAGCGGACGCTGCCCCTTCCGGGCTGCCTGCCCGCTCTGGCTGGCTC
CCAGGTGAAGAGGCTGTCAGCCTCCAAGCGGAAGCAGCACTTCATCAACCAGGCTGTGCGGAAC
TCAGACCTCGTGCCCAAGGCCAAGGGGCGGAAGAGCCTCCAGCGCCTAGAGAACACCCAGTACC
TCCTAACCCTGCTGGAGACAGACGGGGGCACAGCTGGCCTGGACGATGGGGACCTGGCCCCCCC
GGCAGCACCCGGCATCTTCGCAGAGGCCTGCAGCAATGAGACCTACGTGGAGGTCTGGAATGAC
TTCATGAACCGCTCCGGGGAGGAGCAGGAAAGGGTTCTCCGCTACCTGGAGGATGAGGGCAAGA
GCAAGGCGCGGAGGAGGGGGCCTGGCCGCGGGGAGGACCGCAGGAGAGAGGACCCAGCCTACAC
GCCCCGCGACTGCTTCCAGCGCATCAGCCGGCGTCTGAGAGCCGTCCTCAAGCGGAGCCGCATC
CCCATGGCAACGCTGGAGACCTGGGAGGAGCGGTTGCTGAGGTTCTTTTCTGTGTCCCCCCAGG
CCGTGTACACGGCCATGCTGGACAACAGCTTTGAGCGGCTCCTGCTTCACGCCGTCTGCCAGTA
CATGGACCTCATCTCAGCCAGCGCGGACCTGGAAGGCAAGAGGCAGATGAGGGTCAGCAACCGG
CACCTGGACTTCCTGCCGCCCGGGCTGCTCCTGTCCGCGTACCTGGAGCAGCGGAGCTGATGGC
GGCCCCCGCGGCCTCCCCGGCGCCAACACCTCGATGCCATTTGCTGCAGTGTCTTTATTATTTT
GAGAATTCGTCCCTGTAGACTCGCTGCCCGCGGGTGGCGCCCTTCACCTGGCCCTGCCCGTCGC
CTCTCCCAGGTAACCGCCCGCGGGGCCTGGGGCTGCCCGGGCCTCGTGCGAGCGGCGAGAGCGG
CCCGGCCCCGTCCCCGACCTTCGTTCTGCTTTCCCGGCCCGGCCCAGCGCCTGAGCAAGGAGTG
AGAGGCTGGGTTTTTATCACTTTTAATGAATTTGGCATGATTTGTTGTAGATTTTTAAAATTTC
CCTTTTGGGAAGAAAAACCAAAAACTTGCCCCAGCTGATACATTGGGGGACTTTGTTCCCTTCC
CTGCTTGACCCCCCCTCCCAGTTTTTGGGTTGGATTGGGGGGTGTCTCTGGGGCTCTGCCCCTT
TTTCCAGGAGTGGTACGTCGTGTGTGCGTGTGCGTGCGTGTGTGTGCGTGTGCCCCACAACCTA
GAACAGAAGCTCCGTGTTAGAGGCTGGTCTTCCCCGCCCTGGGGTGTGCGCTGCTCTCGCCTGG
TGGCTCCTGGGGCTTTGTCTGCTCTGCACACCTCCTCCCTGCATCCTGGAGGTCGGAACTTCCA
GCCAGAAGCCTCTGCCCTCGGACTGCCCCACTCCCCTCCCTCTGCCCCCCGCCCCCGGCCCGGC
CCCTGCCTGTTACCTTGGGGTGTCCTCGCACCGGTCACCCCGGCGTGTCCCTCAAAATCAGGGC
CGGGGGACAGCCCTCCCGTGTGTGTGGCTAGTTGTGCTTTGGGAAAAGTGGAGAGTTCAATAAA
TTTCTGGTGCTCTGGTCTCCA

hide sequence

Protein Sequences


Protein RefSeqs	XP_038285290	(Get FASTA)	NCBI Sequence Viewer
	XP_038360814	(Get FASTA)	NCBI Sequence Viewer
	XP_038423973	(Get FASTA)	NCBI Sequence Viewer
	XP_038488082	(Get FASTA)	NCBI Sequence Viewer
	XP_855200	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000029098.4
	ENSCAFP00030031209.1
	ENSCAFP00040016889.1
	ENSCAFP00845020346.1
	ENSCAFP00845020360.1
	ENSCAFP00845020371.1

RefSeq Acc Id:

XP_855200 ⟸ XM_850107

- UniProtKB:

A0A8C0YUK5 (UniProtKB/TrEMBL), A0A8C0NY86 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MVALENPEGSLEEAAAAVGSPPGGQRTLPLPGCLPALAGSQVKRLSASKRKQHFINQAVRNSDL
VPKAKGRKSLQRLENTQYLLTLLETDGGTAGLDDGDLAPPAAPGIFAEACSNETYVEVWNDFMN
RSGEEQERVLRYLEDEGKSKARRRGPGRGEDRRREDPAYTPRDCFQRISRRLRAVLKRSRIPMA
TLETWEERLLRFFSVSPQAVYTAMLDNSFERLLLHAVCQYMDLISASADLEGKRQMRVSNRHLD
FLPPGLLLSAYLEQRS

hide sequence

Ensembl Acc Id:

ENSCAFP00000029098 ⟸ ENSCAFT00000031268

Ensembl Acc Id:

ENSCAFP00000044121 ⟸ ENSCAFT00000082220

Ensembl Acc Id:

ENSCAFP00000052828 ⟸ ENSCAFT00000061381

RefSeq Acc Id:

XP_038360814 ⟸ XM_038504886

RefSeq Acc Id:

XP_038488082 ⟸ XM_038632154

RefSeq Acc Id:	XP_038285290 ⟸ XM_038429362
- UniProtKB:	A0A8C0YUK5 (UniProtKB/TrEMBL), A0A8C0NY86 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038423973 ⟸ XM_038568045
- UniProtKB:	A0A8C0NY86 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCAFP00845020360 ⟸ ENSCAFT00845025839

Ensembl Acc Id:

ENSCAFP00845020346 ⟸ ENSCAFT00845025823

Ensembl Acc Id:

ENSCAFP00845020371 ⟸ ENSCAFT00845025853

Protein Domains

R3H R3H-associated N-terminal

Promoters

RGD ID:

13687136

Promoter ID:

EPDNEW_C5203

Type:

multiple initiation site

Name:

R3HDM4_1

Description:

R3H domain containing 4

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	20	57,761,132 - 57,761,192	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000019665	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030019444	UniProtKB/TrEMBL
	ENSCAFG00040010497	UniProtKB/TrEMBL
	ENSCAFG00845014433	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000031268.5	UniProtKB/TrEMBL
	ENSCAFT00030035781.1	UniProtKB/TrEMBL
	ENSCAFT00040019454.1	UniProtKB/TrEMBL
	ENSCAFT00845025823.1	UniProtKB/TrEMBL
	ENSCAFT00845025839.1	UniProtKB/TrEMBL
	ENSCAFT00845025853.1	UniProtKB/TrEMBL
InterPro	R3H-assoc_dom	UniProtKB/TrEMBL
	R3H_dom	UniProtKB/TrEMBL
	R3H_dom_sf	UniProtKB/TrEMBL
	R3HDM4	UniProtKB/TrEMBL
KEGG Report	cfa:612376	UniProtKB/TrEMBL
NCBI Gene	R3HDM4	ENTREZGENE
PANTHER	PTHR32019	UniProtKB/TrEMBL
	R3H DOMAIN-CONTAINING PROTEIN 4	UniProtKB/TrEMBL
Pfam	R3H	UniProtKB/TrEMBL
	R3H-assoc	UniProtKB/TrEMBL
PROSITE	R3H	UniProtKB/TrEMBL
Superfamily-SCOP	SSF82708	UniProtKB/TrEMBL
UniProt	A0A8C0NY86	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0YUK5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3NTR5_CANLF	UniProtKB/TrEMBL
	A0A8I3P2E6_CANLF	UniProtKB/TrEMBL
	A0A8I3S0V8_CANLF	UniProtKB/TrEMBL
	A0A8P0NKX0_CANLF	UniProtKB/TrEMBL
VGNC ID	VGNC:45245	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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