RGD:118797625 Rat Genome Database

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Variant: RGD:118797625 -  Rattus norvegicus

RGD ID: 118797625
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: Rab1a  
Reference Nucleotide: G
Variant Nucleotide: T
Position
Assembly Chr Position
Rnor_6.0 14 104,499,545
JBrowse: View Region in Genome Browser (JBrowse)
Model




Gene Symbol:Rab1a
Accession:NM_031090
Location:EXON
Amino Acid Prediction: G to V (nonsynonymous)
Amino Acid Position: 202
Polyphen Predictions
Prediction Basis Effect Site Score1 Score2 Diff Number Observed Structures Protein ID PDB ID Inverted
possibly damaging alignment   NO -1.314 -3.534 +2.220 155   NP_112352   +
Amino Acid Sequence
(Calculated using NCBI transcript definition)
MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSY
YRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATN
VEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQSTPVKQSGVGCC*
FHL/EurMcwi (MCW)