RGD:108953545 Rat Genome Database

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Variant: RGD:108953545 -  Rattus norvegicus

RGD ID: 108953545
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: Uty  
Reference Nucleotide: T
Variant Nucleotide: A
Position
Assembly Chr Position
Rnor_6.0 Y 1,142,587
JBrowse: View Region in Genome Browser (JBrowse)
Model




Gene Symbol:Uty
Accession:XM_008773695
Location:EXON
Amino Acid Prediction: Y to F (nonsynonymous)
Amino Acid Position: 225
Polyphen Predictions
Prediction Basis Effect Site Score1 Score2 Diff Number Observed Structures Protein ID PDB ID Inverted
benign alignment     -1.780 -2.006 +0.226 304   XP_008771917   -
Amino Acid Sequence
(Calculated using NCBI transcript definition)
MQMPVKFDILRISGNEEKKMAAEKARGEGEEGSFSLTVEEKKALCGLDSSFFGFLSLCKDGVKMKTLLNKAIHCYESLIV
KAEGKVESDFFCQLGHFNLLLEDYSKALSSYQRYYSLQTDYWKLWLVCKLRFQQKRDTNAAFLYGLGLVYFYYNAFQWAI
RAFQEVLYVDPNFCRAKEIHLRLGFMFKVNTDYESSLKHFQLALRDSNVCTLSSVEIQFHIAHLFEIQNGMARNSWCSKD
ICFMVIRKHRDRGNTILQKQPMNNFYKLKAFHHKSKQLYCNSWMHHNMDLVGDNTTKERYAIQYLQKSLEEDPNSGQSWY
FLGRCYSCIGKVQDAFVSYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHGHAAAWMDLGILYESCNQT
QDAIKCYLNATRSKSCSNTSVLISRIKFLQAQLCNLPQSSLQNKTKLLPSIEEAWSLPIPAELTSRQGAMNTAQQNVSDS
WNSVHTASHHPVQQQVYTQCFTTQKLQGLGKDQQRPFQTGSTRYIHAACVDNQNQNGNHTLPQNSKGDTQNHSSLHIPTS
EEQKIFNFTKESKDSRSKSLSPKTSRQDRDTSNIYVNAKEHSKNIHEITSVPISSLNNEDSVSPNLIIVDNPQLSVLVGE
AMDSVDHDSRTCDKVNNVHPTLHKKPDNLTASSPSSASSTETLSLKVTEQMHTHIVTSFISPNSGLDTINGGPENSESSI
SVSVGLRPRPQIIPSMSVSIYSSSTEVLKACRNLGKNGLSNGHILLDICPPPRPPTSPYPPLPKEKLNPPTPSIYLENKR
DAFFPPLHQFCINPKNPVTVIRGLAGALKLDLGLFSTKTLVEANNEHIVEVRTQFLQPADENWDPSGTKKIWRYENKSSH
TTIAKYAQYQACSFQESLREENERKTQVKDYSDNESTCSDISRRRQKVPFKTIKCGINIDLSDNKKWKLQLHELTKLPAF
VRVVSAGNLLSHVGYTILGMNSVQLCMKVPGSRIPGHQENNNFCSVNINIGPGDCEWFVVPEDYWGVLNDFCEKNNLNFL
MSSWWPNLEDLYEANVPVYRFIQRPGDLVWINAGTVHWVQAIGWCNNITWNVGPLTAFQYKLAVERYEWNKLQSIKSVVP
MVHLSWNMARNIKVSDPKLFEMIK*

Gene Symbol:Uty
Accession:XM_017602447
Location:EXON
Amino Acid Prediction: Y to F (nonsynonymous)
Amino Acid Position: 190
Polyphen Predictions
Prediction Basis Effect Site Score1 Score2 Diff Number Observed Structures Protein ID PDB ID Inverted
possibly damaging alignment     -1.741 -2.545 +0.804 20   XP_017457936   -
Amino Acid Sequence
(Calculated using NCBI transcript definition)
MAAEKARGEGEEGSFSLTVEEKKALCGLDSFFGFLSLCKDGVKMKTLLNKAIHCYESLIVKAEGKVESDFFCQLGHFNLL
LEDYSKALSSYQRYYSLQTDYWKNAAFLYGLGLVYFYYNAFQWAIRAFQEVLYVDPNFCRAKEIHLRLGFMFKVNTDYES
SLKHFQLALRDSNVCTLSSVEIQFHIAHLFEIQRKYHSAKAAYEQLLQIESLPSQVKATVLQQLGWMHHNMDLVGDNTTK
ERYAIQYLQKSLEEDPNSGQSWYFLGRCYSCIGKVQDAFVSYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAV
QLDHGHAAAWMDLGILYESCNQTQDAIKCYLNATRSKSCSNTSVLISRIKFLQAQLCNLPQSSLQNKTKLLPSIEEAWSL
PIPAELTSRQGAMNTAQQNVSDSWNSVHTASHHPVQQQVYTQCFTTQKLQGLGKDQQRPFQTGSTRYIHAACVDNQNQNG
NHTLPQNSKGDTQNHSSLHIPTSEEQKIFNFTKESKDSRSKSLSPKTSRQDRDTSNIYVNAKEHSKNIHEITSVPISSLN
NEDSVSPNLIIVDNPQLSVLVGEAMDSVDHDSRTCDKVNNVHPTLHKKPDNLTASSPSSASSTETLSLKVTEQMHTHIVT
SFISPNSGLDTINGGPENSESSISVSVGLRPRPQIIPSMSVSIYSSSTEVLKACRNLGKNGLSNGHILLDICPPPRPPTS
PYPPLPKEKLNPPTPSIYLENKRDAFFPPLHQFCINPKNPVTVIRGLAGALKLDLGLFSTKTLVEANNEHIVEVRTQFLQ
PADENWDPSGTKKIWRYENKSSHTTIAKYAQYQACSFQESLREENERKTQVKDYSDNESTCSDISRRRQKVPFKTIKCGI
NIDLSDNKKWKLQLHELTKLPAFVRVVSAGNLLSHVGYTILGMNSVQLCMKVPGSRIPGHQENNNFCSVNINIGPGDCEW
FVVPEDYWGVLNDFCEKNNLNFLMSSWWPNLEDLYEANVPVYRFIQRPGDLVWINAGTVHWVQAIGWCNNITWNVGPLTA
FQYKLAVERYEWNKLQSIKSVVPMVHLSWNMARNIKVSDPKLFEMIK*