RGD:405661537 Rat Genome Database

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RGD ID:

405661537

ClinVar ID:

CV3300901

Genic Status:

GENIC

Type:

SNV (SO:0001483)

Associated Genes:

Reference Nucleotide:

Variant Nucleotide:

Position

Assembly	Chr	Position
GRCh37	1	203,153,714
GRCh38	1	203,184,586

JBrowse:

Model

ClinVar Data

HGVS Name(s)	Last Evaluated	Molecular Consequence	Clinical Significance	Trait Synonyms
NM_001276.4:c.304G>T NG_013056.2:g.7118G>T NG_013056.1:g.7209G>T NC_000001.11:g.203184586C>A More...	02/06/2024	missense variant	uncertain significance	AllHighlyPenetrant

Variant Details

Variant Transcripts

Gene Symbol:	CHI3L1
Accession:	XM_047442841
Location:	EXON
Amino Acid Prediction:	G to W (nonsynonymous)
Amino Acid Position:	102

Amino Acid Sequence (Calculated using NCBI transcript definition)
MGVKASQTGFVVLVLLQCCSAYKLVCYYTSWSQYREGDGSCFPDALDRFLCTHIIYSFANISNDHIDTWEWNDVTLYGML NTLKNRNPNLKTLLSVGGWNFWSQRADFGPRFSKIASNTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGRRDKQHFTTLI KEMKAEFIKEAQPGKKQLLLSAALSAGKVTIDSSYDIAKISQHLDFISIMTYDFHGAWRGTTGHHSPLFRGQEDASPDRF SNTICDFLRGATVHRILGQQVPYATKGNQWVGYDDQESVKSKVGFPKATPQDKEKEGGPAPSSQIPVPCTEVWAGLTEHM CPVHTLGQGTQPCSSGPPLPGAVPEGQAAGGRHGMGPGPG*

Gene Symbol:	CHI3L1
Accession:	NM_001276
Location:	EXON
Amino Acid Prediction:	G to W (nonsynonymous)
Amino Acid Position:	102

Amino Acid Sequence (Calculated using NCBI transcript definition)
MGVKASQTGFVVLVLLQCCSAYKLVCYYTSWSQYREGDGSCFPDALDRFLCTHIIYSFANISNDHIDTWEWNDVTLYGML NTLKNRNPNLKTLLSVGGWNFWSQRFSKIASNTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGRRDKQHFTTLIKEMKAE FIKEAQPGKKQLLLSAALSAGKVTIDSSYDIAKISQHLDFISIMTYDFHGAWRGTTGHHSPLFRGQEDASPDRFSNTDYA VGYMLRLGAPASKLVMGIPTFGRSFTLASSETGVGAPISGPGIPGRFTKEAGTLAYYEICDFLRGATVHRILGQQVPYAT KGNQWVGYDDQESVKSKVQYLKDRQLAGAMVWALDLDDFQGSFCGQDLRFPLTNAIKDALAAT*

Gene Symbol:	CHI3L1
Accession:	XM_047442873
Location:	EXON
Amino Acid Prediction:	G to W (nonsynonymous)
Amino Acid Position:	102

Amino Acid Sequence (Calculated using NCBI transcript definition)
MGVKASQTGFVVLVLLQCCSAYKLVCYYTSWSQYREGDGSCFPDALDRFLCTHIIYSFANISNDHIDTWEWNDVTLYGML NTLKNRNPNLKTLLSVGGWNFWSQRADFGPRFSKIASNTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGRRDKQHFTTLI KEMKAEFIKEAQPGKKQLLLSAALSAGKVTIDSSYDIAKISQPPPFLLAPRLILTPPLMPVRNKEQPSSLISPESRAMGL GKPRSKEQRLFKMTSELSLGSQGGVNSVLN*

Gene Symbol:	CHI3L1
Accession:	XM_047442879
Location:	EXON
Amino Acid Prediction:	G to W (nonsynonymous)
Amino Acid Position:	102

Amino Acid Sequence (Calculated using NCBI transcript definition)
MGVKASQTGFVVLVLLQCCSAYKLVCYYTSWSQYREGDGSCFPDALDRFLCTHIIYSFANISNDHIDTWEWNDVTLYGML NTLKNRNPNLKTLLSVGGWNFWSQRFSKIASNTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGRRDKQHFTTLIKEMKAE FIKEAQPGKKQLLLSAALSAGKVTIDSSYDIAKISQPPPFLLAPRLILTPPLMPVRNKEQPSSLISPESRAMGLGKPRSK EQRLFKMTSELSLGSQGGVNSVLN*

Gene Symbol:	CHI3L1
Accession:	XM_047442846
Location:	EXON
Amino Acid Prediction:	G to W (nonsynonymous)
Amino Acid Position:	102

Amino Acid Sequence (Calculated using NCBI transcript definition)
MGVKASQTGFVVLVLLQCCSAYKLVCYYTSWSQYREGDGSCFPDALDRFLCTHIIYSFANISNDHIDTWEWNDVTLYGML NTLKNRNPNLKTLLSVGGWNFWSQRFSKIASNTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGRRDKQHFTTLIKEMKAE FIKEAQPGKKQLLLSAALSAGKVTIDSSYDIAKISQHLDFISIMTYDFHGAWRGTTGHHSPLFRGQEDASPDRFSNTICD FLRGATVHRILGQQVPYATKGNQWVGYDDQESVKSKVGFPKATPQDKEKEGGPAPSSQIPVPCTEVWAGLTEHMCPVHTL GQGTQPCSSGPPLPGAVPEGQAAGGRHGMGPGPG*

Gene Symbol:	CHI3L1
Accession:	XM_047442848
Location:	EXON
Amino Acid Prediction:	G to W (nonsynonymous)
Amino Acid Position:	102

Amino Acid Sequence (Calculated using NCBI transcript definition)
MGVKASQTGFVVLVLLQCCSAYKLVCYYTSWSQYREGDGSCFPDALDRFLCTHIIYSFANISNDHIDTWEWNDVTLYGML NTLKNRNPNLKTLLSVGGWNFWSQRFSKIASNTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGRRDKQHFTTLIKEMKAE FIKEAQPGKKQLLLSAALSAGKVTIDSSYDIAKISQHLDFISIMTYDFHGAWRGTTGHHSPLFRGQEDASPDRFSNTICD FLRGATVHRILGQQVPYATKGNQWVGYDDQESVKSKVQYLKDRQLAGAMVWALDLDDFQGSFCGQDLRFPLTNAIKDALA AT*

Gene Symbol:	CHI3L1
Accession:	XM_047442847
Location:	EXON
Amino Acid Prediction:	G to W (nonsynonymous)
Amino Acid Position:	102

Amino Acid Sequence (Calculated using NCBI transcript definition)
MGVKASQTGFVVLVLLQCCSAYKLVCYYTSWSQYREGDGSCFPDALDRFLCTHIIYSFANISNDHIDTWEWNDVTLYGML NTLKNRNPNLKTLLSVGGWNFWSQRADFGPRFSKIASNTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGRRDKQHFTTLI KEMKAEFIKEAQPGKKQLLLSAALSAGKVTIDSSYDIAKISQHLDFISIMTYDFHGAWRGTTGHHSPLFRGQEDASPDRF SNTICDFLRGATVHRILGQQVPYATKGNQWVGYDDQESVKSKVQYLKDRQLAGAMVWALDLDDFQGSFCGQDLRFPLTNA IKDALAAT*

Gene Symbol:	CHI3L1
Accession:	XM_047442840
Location:	EXON
Amino Acid Prediction:	G to W (nonsynonymous)
Amino Acid Position:	102

Amino Acid Sequence (Calculated using NCBI transcript definition)
MGVKASQTGFVVLVLLQCCSAYKLVCYYTSWSQYREGDGSCFPDALDRFLCTHIIYSFANISNDHIDTWEWNDVTLYGML NTLKNRNPNLKTLLSVGGWNFWSQRADFGPRFSKIASNTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGRRDKQHFTTLI KEMKAEFIKEAQPGKKQLLLSAALSAGKVTIDSSYDIAKISQHLDFISIMTYDFHGAWRGTTGHHSPLFRGQEDASPDRF SNTDYAVGYMLRLGAPASKLVMGIPTFGRSFTLASSETGVGAPISGPGIPGRFTKEAGTLAYYEICDFLRGATVHRILGQ QVPYATKGNQWVGYDDQESVKSKVQYLKDRQLAGAMVWALDLDDFQGSFCGQDLRFPLTNAIKDALAAT*

Variant Samples

Additional Information

External Database Links

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Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

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