rs145959973 Rat Genome Database

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Variant: rs145959973 -  Homo sapiens

RGD ID: 15180230
RS ID: rs145959973
ClinVar ID: CV713015
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: CDCA5  
Reference Nucleotide: C
Variant Nucleotide: T
Position
Assembly Chr Position
GRCh37 11 64,846,984
GRCh38 11 65,079,512
JBrowse: View Region in Genome Browser (JBrowse)
Model



ClinVar Data
HGVS Name(s) Last Evaluated Molecular Consequence Clinical Significance Trait Synonyms
NM_080668.4:c.519G>A
NC_000011.10:g.65079512C>T
NC_000011.9:g.64846984C>T
NM_080668.3:c.519G>A
More... 		12/31/2019 synonymous variant benign none provided

Variant Details
Variant Transcripts
Gene Symbol:CDCA5
Accession:NM_080668
Location:EXON
Amino Acid Prediction: G to G (synonymous)
Amino Acid Position: 173
Amino Acid Sequence
(Calculated using NCBI transcript definition)
MSGRRTRSGGAAQRSGPRAPSPTKPLRRSQRKSGSELPSILPEIWPKTPSAAAVRKPIVLKRIVAHAVEVPAVQSPRRSP
RISFFLEKENEPPGRELTKEDLFKTHSVPATPTSTPVPNPEAESSSKEGELDARDLEMSKKVRRSYSRLETLGSASTSTP
GRRSCFGFEGLLGAEDLSGVSPVVCSKLTEVPRVCAKPWAPDMTLPGISPPPEKQKRKKKKMPEILKTELDEWAAAMNAE
FEAAEQFDLLVE*

Gene Symbol:CDCA5
Accession:XM_005273733
Location:EXON
Amino Acid Prediction: G to G (synonymous)
Amino Acid Position: 173
Amino Acid Sequence
(Calculated using NCBI transcript definition)
MSGRRTRSGGAAQRSGPRAPSPTKPLRRSQRKSGSELPSILPEIWPKTPSAAAVRKPIVLKRIVAHAVEVPAVQSPRRSP
RISFFLEKENEPPGRELTKEDLFKTHSVPATPTSTPVPNPEAESSSKEGELDARDLEMSKKVRRSYSRLETLGSASTSTP
GRRSCFGFEGLLGAEDLSGVSPVVCSKLTEVPRVCAKPWAPDMTLPGISPPPEKQKRKKKKMPEILSLRGRQRAHSKLAN
KPVVQPVEEQEPKGPQASEERNLEPPSSEQLEPTVTFLFTLLNTSEPTEPKDPESDSEIQEYQFLDQEDWGPQRTSKEIR
QLQNDCMRLRESLNTTQVHNLALGEKLQNLPTLLYKSLKEGAQAIQEEAQAIQDEVKALQEESQALPEVALLRCAGSHGS
GEGRGGCPMLLTRAVSACSDPNPRKAGLLFKLPDLPHDHRDQGQAWPGPRPEVGHLLGRPLLQPAPP*

Gene Symbol:CDCA5
Accession:XM_005273734
Location:EXON
Amino Acid Prediction: G to G (synonymous)
Amino Acid Position: 173
Amino Acid Sequence
(Calculated using NCBI transcript definition)
MSGRRTRSGGAAQRSGPRAPSPTKPLRRSQRKSGSELPSILPEIWPKTPSAAAVRKPIVLKRIVAHAVEVPAVQSPRRSP
RISFFLEKENEPPGRELTKEDLFKTHSVPATPTSTPVPNPEAESSSKEGELDARDLEMSKKVRRSYSRLETLGSASTSTP
GRRSCFGFEGLLGAEDLSGVSPVVCSKLTEVPRVCAKPWAPDMTLPGISPPPEKQKRKKKKMPEILSLRGRQRAHSKLAN
KPVVQPVEEQEPKGPQASEERNLEPPSSEQLEPTVTFLFTLLNTSEPTEPKDPESDSEIQEYQFLDQEDWGPQRTSKEIR
QLQNDCMRLRESLNTTQVHNLALGEKLQNLPTLLYKSLKEGAQAIQEEAQAIQDEVKALQEESQALPEVALLSDPNPRKA
GLLFKLPDLPHDHRDQGQAWPGPRPEVGHLLGRPLLQPAPP*

Gene Symbol:CDCA5
Accession:XM_011544743
Location:EXON
Amino Acid Prediction: G to G (synonymous)
Amino Acid Position: 173
Amino Acid Sequence
(Calculated using NCBI transcript definition)
MSGRRTRSGGAAQRSGPRAPSPTKPLRRSQRKSGSELPSILPEIWPKTPSAAAVRKPIVLKRIVAHAVEVPAVQSPRRSP
RISFFLEKENEPPGRELTKEDLFKTHSVPATPTSTPVPNPEAESSSKEGELDARDLEMSKKVRRSYSRLETLGSASTSTP
GRRSCFGFEGLLGAEDLSGVSPVVCSKLTEVPRVCAKPWAPDMTLPGISPPPEKQKRKKKKMPEILSLRGRQRAHSKLAN
KPVVQPVEEQEPKGPQASEERNLEPPSSEQLEPTVTFLFTLLNTSEPTEPKDPESDSEIQEYQFLDQEDWGPQRTSKEIR
QLQNDCMRLRESLNTTQVHNLALGEKLQNLPTLLYKSLKEGAQAIQEEAQAIQDEVKALQEESQALPEVALLRETTAKRM
EIQGCLSVFTTWCPGGHVTLQAHPGARVQAQKKQKVSQK*

Gene Symbol:CDCA5
Accession:XM_011544749
Location:EXON
Amino Acid Prediction: G to G (synonymous)
Amino Acid Position: 173
Amino Acid Sequence
(Calculated using NCBI transcript definition)
MSGRRTRSGGAAQRSGPRAPSPTKPLRRSQRKSGSELPSILPEIWPKTPSAAAVRKPIVLKRIVAHAVEVPAVQSPRRSP
RISFFLEKENEPPGRELTKEDLFKTHSVPATPTSTPVPNPEAESSSKEGELDARDLEMSKKVRRSYSRLETLGSASTSTP
GRRSCFGFEGLLGAEDLSGVSPVVCSKLTEVPRVCAKPWAPDMTLPGISPPPEKQKRKKKKMPEILSLRGRQRAHSKLAN
KPVVQPVEEQEPKGPQASEERNLEASGVTEHHPSAQPGPGGEAAEPAHLIV*

Gene Symbol:CDCA5
Accession:XM_011544748
Location:EXON
Amino Acid Prediction: G to G (synonymous)
Amino Acid Position: 173
Amino Acid Sequence
(Calculated using NCBI transcript definition)
MSGRRTRSGGAAQRSGPRAPSPTKPLRRSQRKSGSELPSILPEIWPKTPSAAAVRKPIVLKRIVAHAVEVPAVQSPRRSP
RISFFLEKENEPPGRELTKEDLFKTHSVPATPTSTPVPNPEAESSSKEGELDARDLEMSKKVRRSYSRLETLGSASTSTP
GRRSCFGFEGLLGAEDLSGVSPVVCSKLTEVPRVCAKPWAPDMTLPGISPPPEKQKRKKKKMPEILSLRGRQRAHSKLAN
KPVVQPVEEQEPKGPQASEERNLESPWRFLCKATFLRTTGTHRHVPVYTPEHL*

Gene Symbol:CDCA5
Accession:XM_017017158
Location:EXON
Amino Acid Prediction: G to G (synonymous)
Amino Acid Position: 173
Amino Acid Sequence
(Calculated using NCBI transcript definition)
MSGRRTRSGGAAQRSGPRAPSPTKPLRRSQRKSGSELPSILPEIWPKTPSAAAVRKPIVLKRIVAHAVEVPAVQSPRRSP
RISFFLEKENEPPGRELTKEDLFKTHSVPATPTSTPVPNPEAESSSKEGELDARDLEMSKKVRRSYSRLETLGSASTSTP
GRRSCFGFEGLLGAEDLSGVSPVVCSKLTEVPRVCAKPWAPDMTLPGISPPPEKQKRKKKKMPEILSLRGRQRAHSKLAN
KPVVQPVEEQEPKGPQASEERNLEPPSSEQLEPTVTFLFTLLNTSEPTEPKDPESDSEIQEYQFLDQEDWGPQRTSKEIR
QLQNDCMRLRESLNTTQVHNLALGEKLQNLPTLLYKSLKEGAQAIQEEAQAIQDEVKALQEESQALPEVALLSI*

Gene Symbol:CDCA5
Accession:XR_001747758
Location:EXON;NON-CODING

Gene Symbol:CDCA5
Accession:XR_001747757
Location:EXON;NON-CODING

Gene Symbol:CDCA5
Accession:XM_011544747
Location:INTRON

Variant Samples
Additional References at PubMed
PMID:25741868   PMID:28492532  


Additional Information

Database Acc Id Source(s)
ClinVar RCV000974100 CLINVAR
dbSNP (RS) rs145959973 CLINVAR
MedGen C3661900 CLINVAR
NCBI Gene CDCA5 CLINVAR
OMIM 609374 CLINVAR