rs115439873 Rat Genome Database

rs115439873 Rat Genome Database

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Variant: rs115439873 - Homo sapiens

RGD ID:

150491583

RS ID:

rs115439873

ClinVar ID:

CV1251213

Genic Status:

GENIC

Type:

SNV (SO:0001483)

Associated Genes:

SCP2

Reference Nucleotide:

C

Variant Nucleotide:

T

Position

Assembly	Chr	Position
GRCh37	1	53,504,872
GRCh38	1	53,039,200

JBrowse:

View Region in Genome Browser (JBrowse)

Model

HGVS Name(s)	Last Evaluated	Molecular Consequence	Clinical Significance	Trait Synonyms
NM_001193617.2:c.1225+154C>T NM_001007250.3:c.127-8658C>T NM_001193600.2:c.1336+154C>T NM_001193599.2:c.1396+154C>T More...	07/05/2018	intron variant	benign	none provided

Gene Symbol:	SCP2
Accession:	NM_001193599
Location:	INTRON

Gene Symbol:	SCP2
Accession:	NM_001007099
Location:	INTRON

Gene Symbol:	SCP2
Accession:	NM_001007100
Location:	INTRON

Gene Symbol:	SCP2
Accession:	NM_001007098
Location:	INTRON

Gene Symbol:	SCP2
Accession:	NM_001007250
Location:	INTRON

Gene Symbol:	SCP2
Accession:	NM_002979
Location:	INTRON

Gene Symbol:	SCP2
Accession:	XM_047427508
Location:	INTRON

Gene Symbol:	SCP2
Accession:	XM_011541935
Location:	INTRON

Gene Symbol:	SCP2
Accession:	NM_001193617
Location:	INTRON

Gene Symbol:	SCP2
Accession:	NM_001330587
Location:	INTRON

Gene Symbol:	SCP2
Accession:	XM_047427506
Location:	INTRON

Gene Symbol:	SCP2
Accession:	XM_047427507
Location:	INTRON

Gene Symbol:	SCP2
Accession:	XM_047427504
Location:	INTRON

Gene Symbol:	SCP2
Accession:	NM_001193600
Location:	INTRON

Gene Symbol:	SCP2
Accession:	XM_005271103
Location:	INTRON

ClinVar GRCh37	ClinVar GRCh38

PMID:25741868

Database	Acc Id	Source(s)
ClinVar	RCV001674881	CLINVAR
dbSNP (RS)	rs115439873	CLINVAR
MedGen	C3661900	CLINVAR
NCBI Gene	SCP2	CLINVAR
OMIM	184755	CLINVAR