rs6560829 Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

Variant: rs6560829 -  Homo sapiens

RGD ID: 150409098
RS ID: rs6560829
ClinVar ID: CV1175237
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: TUBB8  
Reference Nucleotide: A
Variant Nucleotide: T
Position
Assembly Chr Position
GRCh37 10 95,226
GRCh38 10 49,286
JBrowse: View Region in Genome Browser (JBrowse)
Model



ClinVar Data
HGVS Name(s) Last Evaluated Molecular Consequence Clinical Significance Trait Synonyms
NM_001389618.1:c.-160+122T>A
NG_046777.1:g.32170T>A
NC_000010.11:g.49286A>T
NC_000010.10:g.95226A>T
More... 		07/10/2021 5 prime utr variant benign none provided; OOCYTE/ZYGOTE/EMBRYO MATURATION ARREST 2
Disease Annotations     Click to see Annotation Detail View


Variant Details
Variant Transcripts
Gene Symbol:TUBB8
Accession:NM_177987
Location:5UTRS;EXON

Gene Symbol:TUBB8
Accession:NM_001389619
Location:5UTRS;INTRON

Gene Symbol:TUBB8
Accession:NM_001389618
Location:5UTRS;INTRON

Gene Symbol:TUBB8
Accession:XM_017016193
Location:INTRON

Gene Symbol:TUBB8
Accession:XM_047425177
Location:INTRON

Variant Samples
Additional References at PubMed
PMID:25741868  


Additional Information

Database Acc Id Source(s)
ClinVar RCV001543799 CLINVAR
  RCV004718893 CLINVAR
dbSNP (RS) rs6560829 CLINVAR
MedGen C3661900 CLINVAR
  C4225210 CLINVAR
NCBI Gene TUBB8 CLINVAR
OMIM 616768 CLINVAR
  616780 CLINVAR