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Strain: SHR.SHRSP-(D1Rat93-D1Rat269)(D18Rat73-D18Rat11)/Izm

Symbol: SHR.SHRSP-(D1Rat93-D1Rat269)(D18Rat73-D18Rat11)/Izm
Strain: SHR.SHRSP-(D1Rat93-D1Rat269)(D18Rat73-D18Rat11)
Substrain: Izm
RGD ID: 7411705
RRID: RGD_7411705
Ontology ID: RS:0003572
Also known as: SHR.SHRSP-(D1Rat93-D1Rat269)(D18Rat73-D18Rat11)/Izm; SHRpch1_18; NBRP Rat No: 0707
Type: congenic
Source: Department of Functional Pathology, Shimane University Faculty of Medicine, Izumo, Japan, National BioResource Project for the Rat in Japan
Origin: constructed by crossing and backcrossing the congenic strains for chr 1 and chr 18 segments
Coat Color: Albino
Inbred Generations: F11
Last Known Status: Cryopreserved Embryo; Cryopreserved Sperm
Research Usage Cardio-Hypertension
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2165,677,942 - 124,977,364RGD_MAPPER_PIPELINE
mRatBN7.21849,999,958 - 68,414,117RGD_MAPPER_PIPELINE
Rnor_6.01851,609,032 - 70,803,264RGD_MAPPER_PIPELINERnor6.0
Rnor_6.0164,252,881 - 132,448,306RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01850,804,228 - 69,942,605RGD_MAPPER_PIPELINERnor5.0
Rnor_5.0163,244,295 - 133,485,967RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41852,290,789 - 71,692,408RGD_MAPPER_PIPELINERGSC3.4
RGSC_v3.4163,990,899 - 126,292,805RGD_MAPPER_PIPELINERGSC3.4





Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

References


Region

Position Markers

Flank 1 / 1 (D1Rat93)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2165,677,942 - 65,678,123 (+)MAPPER
Rnor_6.0164,252,881 - 64,253,061NCBI
Rnor_5.0163,244,295 - 63,244,475UniSTS
RGSC_v3.4163,990,899 - 63,991,255RGD
RGSC_v3.4163,990,910 - 63,991,090UniSTS
RGSC_v3.1164,067,649 - 64,067,829RGD
Celera163,401,914 - 63,402,094UniSTS
RH 3.4 Map1740.2RGD
RH 3.4 Map1740.2UniSTS
RH 2.0 Map1460.8RGD
FHH x ACI Map133.7599RGD
Cytogenetic Map1q12UniSTS

Flank 2 / 1 (D1Rat269)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21124,977,174 - 124,977,364 (+)MAPPER
Rnor_6.01132,448,117 - 132,448,306NCBI
Rnor_5.01133,485,778 - 133,485,967UniSTS
RGSC_v3.41126,292,616 - 126,292,805UniSTS
RGSC_v3.41126,292,615 - 126,292,805RGD
RGSC_v3.11126,370,959 - 126,371,148RGD
Celera1117,133,184 - 117,133,371UniSTS
RH 3.4 Map1979.2RGD
RH 3.4 Map1979.2UniSTS
RH 2.0 Map1663.9RGD
SHRSP x BN Map160.8499RGD

Flank 1 / 2 (D18Rat73)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21849,999,958 - 50,000,167 (+)MAPPER
Rnor_6.01851,609,032 - 51,609,240NCBI
Rnor_5.01850,804,228 - 50,804,436UniSTS
RGSC_v3.41852,290,789 - 52,291,194RGD
RGSC_v3.41852,290,924 - 52,291,132UniSTS
RGSC_v3.11852,336,284 - 52,336,689RGD
Celera1848,145,282 - 48,145,490UniSTS
SHRSP x BN Map1819.1999RGD
SHRSP x BN Map1819.1999UniSTS

Flank 2 / 2 (D18Rat11)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21868,413,983 - 68,414,117 (+)MAPPER
Rnor_6.01870,803,131 - 70,803,264NCBI
Rnor_5.01869,942,468 - 69,942,605UniSTS
RGSC_v3.41871,692,275 - 71,692,408UniSTS
RGSC_v3.41871,692,274 - 71,692,408RGD
RGSC_v3.11871,765,476 - 71,765,609RGD
Celera1866,590,295 - 66,590,428UniSTS
RH 3.4 Map18698.1RGD
RH 3.4 Map18698.1UniSTS
RH 2.0 Map18211.5RGD
FHH x ACI Map1847.4699RGD

Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-05-27 SHR.SHRSP-(D1Rat93-D1Rat269)(D18Rat73-D18Rat11)/Izm    SHR.SHRSP-(D1Rat93-D1Rat269)(D18Rat73-D18Rat11)/Izm    Name updated 68913 APPROVED
2015-05-27 SHR.SHRSP-(D1Rat93-D1Rat269)(D18Rat73-D18Rat11)/Izm    SHR.SHRSP-(D1Rat93-D1Rat269)(D18Rat73-D18Rat11)/Izm    Name updated 68913 APPROVED
2013-11-19 SHR.SHRSP-(D1Rat93-D1Rat269)(D18Rat73-D18Rat11)/Izm    SHR.SHRSP-(D1Rat93-D1Rat269)(D18Rat73-D18Rat11)/Izm (COPY)    Name updated 68913 APPROVED
2013-11-19 SHR.SHRSP-(D1Rat93-D1Rat269)(D18Rat73-D18Rat11)/Izm    SHR.SHRSP-(D1Rat93-D1Rat269)(D18Rat73-D18Rat11)/Izm (COPY)    Name updated 68913 APPROVED
2013-11-19 SHR.SHRSP-(D1Rat93-D1Rat269)(D18Rat73-D18Rat11)/Izm    SHR.SHRSP-(D1Rat93-D1Rat269)(D18Rat73-D18Rat11)/Izm (COPY)    Symbol updated 68687 APPROVED
2013-11-19 SHR.SHRSP-(D1Rat93-D1Rat269)(D18Rat73-D18Rat11)/Izm    SHR.SHRSP-(D1Rat93-D1Rat269)(D18Rat73-D18Rat11)/Izm (COPY)    Symbol updated 68687 APPROVED