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Strain: SHR.BN-(D2Rat114-D2Rat123)/Jk

Symbol: SHR.BN-(D2Rat114-D2Rat123)/Jk
Strain: SHR.BN-(D2Rat114-D2Rat123)
Substrain: Jk
RGD ID: 2306892
RRID: RGD_2306892
Ontology ID: RS:0002154
Also known as: SHR.BN2a; SHR.BN-(D2Rat114-D2Rat123)/Jk; SHR.BN-(D2Rat114-D2Rat123)/Jk
Type: congenic
Source: Heart Institute (InCor), University of Sao Paulo Medical School, Sao Paulo, Brazil. Genetica
Origin: Backcross marker-assisted method was used to fix the BN fragment onto SHR genome, once selection was done using markers, male and female were crossed to get homozygous animals
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22109,366,814 - 109,366,971RGD_MAPPER_PIPELINE
Rnor_6.0236,245,223 - 112,175,725RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0255,361,257 - 131,889,716RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4236,432,989 - 112,326,568RGD_MAPPER_PIPELINERGSC3.4






Phenotype Values via PhenoMiner     Click to see Annotation Detail View
Options:  View chart  |  Download data table  |  View expanded data table


References

References - curated
1. Aneas I, etal., Physiol Genomics. 2009 Mar 3;37(1):52-7. Epub 2009 Jan 6.
2. RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D2Rat114)
Rat AssemblyChrPosition (strand)Source
Rnor_6.0236,245,223 - 36,245,442NCBI
Rnor_5.0255,361,257 - 55,361,476UniSTS
RGSC_v3.4236,433,087 - 36,433,332UniSTS
RGSC_v3.4236,432,989 - 36,433,341RGD
RGSC_v3.1236,353,456 - 36,353,701RGD
Celera232,635,324 - 32,635,569UniSTS
RH 3.4 Map2161.1RGD
RH 3.4 Map2161.1UniSTS
RH 2.0 Map245.8RGD
SHRSP x BN Map216.1298RGD
Cytogenetic Map2q16UniSTS

Flank 2 / 1 (D2Rat123)
Rat AssemblyChrPosition (strand)Source
mRatBN7.22109,366,814 - 109,366,971 (+)MAPPER
Rnor_6.02112,175,569 - 112,175,725NCBI
Rnor_5.02131,889,560 - 131,889,716UniSTS
RGSC_v3.42112,326,411 - 112,326,568RGD
RGSC_v3.42112,326,412 - 112,326,568UniSTS
RGSC_v3.12112,271,374 - 112,271,530RGD
Celera2104,595,579 - 104,595,735UniSTS
RH 3.4 Map2725.9UniSTS
RH 3.4 Map2725.9RGD
RH 2.0 Map2533.9RGD
SHRSP x BN Map238.7498RGD
FHH x ACI Map250.0599RGD
Strain QTL Data
Symbol Name Trait
Bp336 Blood pressure QTL 336 arterial blood pressure trait   (VT:2000000)    

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_other this congenic is not salt sensitive 2306880