MARC_1767-1768:991931306:1 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

Marker: MARC_1767-1768:991931306:1

Symbol: MARC_1767-1768:991931306:1
Previously known as:
RGD ID: 5499603
Expected Size: 237 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2189,563,263 - 89,563,500 (+)MAPPERmRatBN7.2
mRatBN7.21163,541,042 - 163,542,183 (+)MAPPERmRatBN7.2
Rnor_6.01174,134,088 - 174,135,228NCBIRnor6.0
Rnor_6.0193,242,254 - 93,242,490NCBIRnor6.0
Rnor_5.0194,354,654 - 94,354,890UniSTSRnor5.0
Rnor_5.01181,122,758 - 181,123,898UniSTSRnor5.0
RGSC_v3.41167,116,679 - 167,117,819UniSTSRGSC3.4
RGSC_v3.4189,339,683 - 89,339,919UniSTSRGSC3.4
Celera183,904,694 - 83,904,930UniSTS
Celera1161,442,693 - 161,443,833UniSTS
Cytogenetic Map1q21UniSTS
Cytogenetic Map1q33UniSTS
Is Marker For: Genes:   Rpl27a   Rpl27al3  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer TTCTGCCCAACTGTCAACCT
Reverse Primer CTACCAGGACACAGGCCC
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_001106290 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_574425 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide FQ210902 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ211108 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ211330 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ212363 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ217529 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ221029 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ221117 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ221539 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ221745 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ222210 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ222357 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ222908 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  G73044 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  G73045 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH612587.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 293418 UniSTS
  499133 UniSTS