BE120124 Marker Search Result - Rat Genome Database
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Summary
References - curated
Strains and Sequence
Sequence
Region
Genes in Region
Nucleotide Sequences
QTLs in Region (GRCr8)
Additional Information
External Database Links
General
Marker: BE120124
Symbol:
BE120124
Previously known as:
RGD ID:
5063872
Expected Size:
209 (bp)
Position
Rat Assembly
Chr
Position (strand)
Source
JBrowse
mRatBN7.2
14
2,366,797 - 2,367,006 (+)
MAPPER
mRatBN7.2
Rnor_6.0
14
3,384,126 - 3,384,334
NCBI
Rnor6.0
Rnor_5.0
14
3,387,771 - 3,387,979
UniSTS
Rnor5.0
RGSC_v3.4
14
2,927,004 - 2,927,212
UniSTS
RGSC3.4
Celera
14
2,385,130 - 2,385,338
UniSTS
RH 3.4 Map
14
41.9
UniSTS
Cytogenetic Map
14
p22
UniSTS
Is Marker For:
Genes:
Ephx4
Annotation
References - curated
1 to 1 of 1 rows
10
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40
100
All Rows
#
Reference Title
Reference Citation
1.
UniSTS Pipeline
RGD automated pipelines
1 to 1 of 1 rows
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20
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100
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Strains and Sequence
Sequence
Forward Primer
TTCGTGTCTGTGTGGTTGTCTG
Reverse Primer
TATTCCTGCCTCAGAGACGTTG
Region
Genes in Region
1 to 1 of 1 rows
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The following
Genes
overlap with this region.
Full Report
CSV
TAB
Printer
Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1308891
Ephx4
epoxide hydrolase 4
14
2343376
2372680
Rat
1 to 1 of 1 rows
10
20
30
40
100
All Rows
Nucleotide Sequences
1 to 1 of 1 rows
3
5
10
20
30
100
All Rows
GenBank Nucleotide
CH474079
(Get FASTA)
NCBI Sequence Viewer
Search GEO for Microarray Profiles
1 to 1 of 1 rows
3
5
10
20
30
100
All Rows
QTLs in Region (GRCr8)
1 to 6 of 6 rows
10
20
30
40
100
All Rows
The following
QTLs
overlap with this region.
Full Report
CSV
TAB
Printer
Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2300183
Bmd60
Bone mineral density QTL 60
5.7
0.0001
femur mineral mass (VT:0010011)
volumetric bone mineral density (CMO:0001553)
14
1
26541967
Rat
634352
Apr6
Acute phase response QTL 6
3.7
blood interleukin-6 amount (VT:0008595)
plasma interleukin-6 level (CMO:0001927)
14
1
41131407
Rat
619619
Rf4
Renal disease susceptibility QTL 4
4.1
0.002
urine total protein amount (VT:0000032)
urine protein excretion rate to body weight ratio (CMO:0001099)
14
1
32754612
Rat
71115
Niddm15
Non-insulin dependent diabetes mellitus QTL 15
4.8
blood glucose amount (VT:0000188)
plasma glucose level (CMO:0000042)
14
1217606
11030812
Rat
2300159
Bmd61
Bone mineral density QTL 61
5.3
0.0001
femur mineral mass (VT:0010011)
volumetric bone mineral density (CMO:0001553)
14
1
26541967
Rat
70204
Niddm20
Non-insulin dependent diabetes mellitus QTL 20
5.1
0.000008
blood glucose amount (VT:0000188)
blood glucose level area under curve (AUC) (CMO:0000350)
14
1217606
16960180
Rat
1 to 6 of 6 rows
10
20
30
40
100
All Rows
Additional Information
External Database Links
1 to 1 of 1 rows
3
5
10
20
40
100
All Rows
Database
Acc Id
Source(s)
NCBI Gene
289440
UniSTS
1 to 1 of 1 rows
3
5
10
20
40
100
All Rows