RH70098 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

Marker: RH70098

Symbol: RH70098
Previously known as: R85437; 
RGD ID: 2184741
Expected Size: 175 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371116,237,889 - 116,238,063UniSTSGRCh37
Build 361116,039,412 - 116,039,586RGDNCBI36
Celera1114,466,710 - 114,466,884RGD
Cytogenetic Map1p13.1UniSTS
HuRef1114,095,977 - 114,096,151UniSTS
GeneMap99-GB4 RH Map1383.56UniSTS
Is Marker For: Genes:   VANGL1  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer TGAAATACGACCACAAGGTT
Reverse Primer CAGTAGCACAGAAATGTTAGCATA
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_001172411 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001172412 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_138959 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC243373 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL450389 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL606529 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003448 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003496 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471122 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000252 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000462 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000491 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000663 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001609.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486078 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990716 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  G15402 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL295235.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976295.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  R85437 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 81839 UniSTS