D5S1575E Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

Marker: D5S1575E

Symbol: D5S1575E
Previously known as: Bda85g08; GDB:442779; GDB:448537; 
RGD ID: 2143474
Expected Size: 96 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3756,492,433 - 6,492,527UniSTSGRCh37
Build 3656,545,433 - 6,545,527RGDNCBI36
Celera56,520,102 - 6,520,196RGD
Cytogenetic Map5p15.31UniSTS
HuRef56,467,159 - 6,467,253UniSTS
GeneMap99-GB4 RH Map528.06UniSTS
NCBI RH Map516.1UniSTS
Is Marker For: Genes:   UBE2QL1  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer GAAGTTTACACCACAGCAAG
Reverse Primer GATGATTTGCATGATCGGGTC
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_001145161 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB188494 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC093307 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK057805 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK096612 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003452 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003500 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471102 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000256 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000466 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000495 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000667 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001613.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486189 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990827 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  G37760 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000047 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL297528.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583035 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976327.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 134111 UniSTS