REN50625 Marker Search Result - Rat Genome Database

Advanced Search (OLGA)

Symbol:

REN50625

Previously known as:

RGD ID:

1959516

Expected Size:

226 (bp)

Position

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	6	108,709,203 - 108,709,428	UniSTS	GRCh37
Build 36	6	108,815,896 - 108,816,121	RGD	NCBI36
Celera	6	109,455,341 - 109,455,566	RGD
Cytogenetic Map	6	q22.1	UniSTS
HuRef	6	106,276,997 - 106,277,222	UniSTS

Is Marker For:

Genes: AFG1L

Annotation

References - curated

#	Reference Title	Reference Citation
1.	UniSTS Pipeline	RGD automated pipelines

Strains and Sequence

Sequence


Forward Primer	CCACTTACACTAACACCCCATCTG
Reverse Primer	AACAAAACTTAGACATTTCTGGGAATC

Region

Nucleotide Sequences


GenBank Nucleotide	AL353706	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH003453	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH003501	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH471051	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000257	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000467	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000496	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000668	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM001614.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DS486018	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DS990656	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GL000054	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GL298764.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GL582981	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JH976333.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Additional Information

External Database Links

Database	Acc Id	Source(s)
NCBI Gene	246269	UniSTS

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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