Cda0cg07 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

Marker: Cda0cg07

Symbol: Cda0cg07
Previously known as: stSG23541; STGDB:440376; D1S1784E; GDB:440376; 
RGD ID: 1852281
Expected Size: 84 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371153,634,303 - 153,634,387UniSTSGRCh37
Build 361151,900,927 - 151,901,011RGDNCBI36
Celera1126,705,482 - 126,705,566RGD
Cytogenetic Map1q21.3UniSTS
HuRef1124,997,639 - 124,997,723UniSTS
GeneMap99-GB4 RH Map1552.61UniSTS
GeneMap99-GB4 RH Map1555.98UniSTS
NCBI RH Map11261.4UniSTS
NCBI RH Map11081.0UniSTS
Is Marker For: Genes:   ILF2   SNAPIN  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer ATGATATTCTAGTTTACTCTGG
Reverse Primer CTCAGATCACAATTTGAAGC
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_001267809.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_004515.3 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AL592150 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003448 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003496 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471121 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000252 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000462 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000491 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000663 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001609.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486149 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990787 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL301897.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583120 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976304.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 23557 UniSTS
  3608 UniSTS