GDB:197896 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

Marker: GDB:197896

Symbol: GDB:197896
Previously known as:
RGD ID: 1742569
Expected Size: 563 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371134,492,909 - 34,493,471UniSTSGRCh37
Build 361134,449,485 - 34,450,047RGDNCBI36
Celera1134,640,095 - 34,640,657RGD
Cytogenetic Map11p13UniSTS
HuRef1134,190,270 - 34,190,832UniSTS
Is Marker For: Genes:   CAT  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer AAACAGAATGCGATTCACACC
Reverse Primer ATTAAGCCATGACGGTGCTC
 

Region

Nucleotide Sequences
GenBank Nucleotide AL035079 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY545477 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003458 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003506 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471064 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000472 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000501 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000673 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001619.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486025 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990663 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  G66721 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000101 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL295386.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583066 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976375.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X04096 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 847 UniSTS
UniSTS GDB:197896 UniSTS SSLP Pipeline