RH123971 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

Marker: RH123971

Symbol: RH123971
Previously known as: SHGC-105659; 
RGD ID: 1719989
Expected Size: 325 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37352,955,245 - 52,955,569UniSTSGRCh37
Build 36352,930,285 - 52,930,609RGDNCBI36
Celera352,934,060 - 52,934,384RGD
Cytogenetic Map3p21.1UniSTS
HuRef353,016,846 - 53,017,170UniSTS
TNG Radiation Hybrid Map332908.0UniSTS
Is Marker For: Genes:   SFMBT1  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer GGGCATATATGGTAACCGTAGCA
Reverse Primer TATTTTCCTGTCCTTGGCTTTCA
 

Region

Nucleotide Sequences
GenBank Nucleotide AC099667 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC109582 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003450 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003498 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471055 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000254 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000464 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000493 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000665 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001611.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486017 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990655 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  G58933 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000033 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL297121.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL582989 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976316.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 51460 UniSTS