Gm29719 (predicted gene, 29719) - Rat Genome Database

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Gene: Gm29719 (predicted gene, 29719) Mus musculus
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Symbol: Gm29719
Name: predicted gene, 29719
RGD ID: 9672464
MGI Page MGI
Description:
Type: pseudo (Ensembl: transcribed_unprocessed_pseudogene)
RefSeq Status: VALIDATED
Previously known as: synaptotagmin-like protein 3
Related Functional Gene: Sytl3  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39176,407,088 - 6,462,231 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl176,419,292 - 6,461,806 (-)EnsemblGRCm39 Ensembl
GRCm39 Ensembl176,407,088 - 6,462,109 (-)EnsemblGRCm39 Ensembl
GRCm38176,356,813 - 6,426,942 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl176,356,813 - 6,411,834 (-)EnsemblGRCm38mm10GRCm38
GRCm38.p6 Ensembl176,369,017 - 6,411,531 (-)EnsemblGRCm38mm10GRCm38
Cytogenetic Map17A1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:12477932  


Genomics

Variants

.
Variants in Gm29719
536 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4141215Mnic1_mmacronutrient intake, carbohydrate 1 (mouse)Not determined485475245670266Mouse
12910982Pifs2_mpeptide-induced fatal syndrome 2 (mouse)17126189355Mouse
12910528Nrq1_mnoise-induced hearing loss resistant QTL 1 (mouse)17129198453Mouse
1357680Idd23_minsulin dependent diabetes susceptibility 23 (mouse)Not determined17397489026401133Mouse
1302196Myaa1_mmodifier of Yaa 1 (mouse)Not determined17120975022Mouse
1302100Circp2_mcircadian photosensitivity 2 (mouse)Not determined17129198453Mouse
4141272Tfv1_mtotal food volume 1 (mouse)Not determined485475265637357Mouse
1300890Bhr3_mbronchial hyperresponsiveness 3 (mouse)Not determined17397489048866091Mouse
1357789Kdnw3_mkidney weight 3 (mouse)Not determined17485475247885665Mouse
10412276Leci2_mleukocyte endothelial cell interactions 2 (mouse)Not determined17334817537348299Mouse
1300706Alan1_malloantigen response 1 (mouse)Not determined17485475246469702Mouse
1300613Pcyts4_mplasmacytoma susceptibility 4 (mouse)Not determined17127081639Mouse
1357452Vtbt18_mvertebral trabecular bone trait 18 (mouse)Not determined17120975022Mouse
1357902Obq19_mobesity QTL 19 (mouse)Not determined17125662076Mouse
1357743Lith3_mlithogenic gene 3 (mouse)Not determined17126194456Mouse
12910527Nrq1a_mnoise-induced hearing loss resistant QTL 1a (mouse)17129198453Mouse
1301615Cfld3_mcystic fibrosis lung disease 3 (mouse)Not determined17127081639Mouse
1301327Lmr7_mleishmaniasis resistance 7 (mouse)Not determined17485475227715939Mouse
13524851Asrq8_macoustic startle response 8 (mouse)17131030170Mouse


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSMUST00000231438
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl176,419,292 - 6,461,806 (-)Ensembl
GRCm38.p6 Ensembl176,369,017 - 6,411,531 (-)Ensembl
Ensembl Acc Id: ENSMUST00000232402
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl176,407,088 - 6,462,109 (-)Ensembl
GRCm38.p6 Ensembl176,356,813 - 6,411,834 (-)Ensembl
RefSeq Acc Id: NR_163600
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39176,407,088 - 6,462,231 (-)NCBI
GRCm38176,356,813 - 6,426,942 (-)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000116719 Ensembl, ENTREZGENE
  ENSMUSG00000116992 Ensembl
Ensembl Transcript ENSMUST00000232402 ENTREZGENE
MGD MGI:5588878 ENTREZGENE
NCBI Gene Gm29719 ENTREZGENE
PhenoGen Gm29719 PhenoGen