Gm26679 (predicted gene, 26679) - Rat Genome Database

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Gene: Gm26679 (predicted gene, 26679) Mus musculus
Analyze
Symbol: Gm26679
Name: predicted gene, 26679
RGD ID: 9657218
MGI Page MGI
Description:
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: MODEL
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3914120,599,774 - 120,626,312 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl14120,621,673 - 120,626,615 (-)EnsemblGRCm39 Ensembl
GRCm3814120,362,362 - 120,388,900 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl14120,384,859 - 120,388,985 (-)EnsemblGRCm38mm10GRCm38
Celera14118,938,230 - 118,942,827 (-)NCBICelera
Cytogenetic Map14E4NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:16141072   PMID:16141073  



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Variants in Gm26679
1090 total Variants

Predicted Target Of
Summary Value
Count of predictions:91
Count of miRNA genes:85
Interacting mature miRNAs:88
Transcripts:ENSMUST00000181685
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1357589Kdnw2_mkidney weight 2 (mouse)Not determined1420887473121269804Mouse
14700789Mencq8_mmeniscus calcification QTL 8 (mouse)14120299412121109412Mouse
12792981Fbmd5_mfemoral bone mineral density 5, females only (mouse)1499838217125033054Mouse
10755523Hgb2_mhemoglobin 2 (mouse)14105884654125139656Mouse
RefSeq Transcripts XR_003951152 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC154811 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK083202 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000181685
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl14120,622,271 - 120,626,397 (-)Ensembl
GRCm38.p6 Ensembl14120,384,859 - 120,388,985 (-)Ensembl
Ensembl Acc Id: ENSMUST00000259651
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl14120,621,673 - 120,626,615 (-)Ensembl
RefSeq Acc Id: XR_003951152
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3914120,599,774 - 120,626,312 (-)NCBI
GRCm3814120,362,362 - 120,388,900 (-)NCBI
Sequence:


Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000097903 Ensembl
MGD MGI:5477173 ENTREZGENE
NCBI Gene Gm26679 ENTREZGENE
PhenoGen Gm26679 PhenoGen
RNAcentral URS0000CC79AC RNACentral