Gm28578 (predicted gene 28578) - Rat Genome Database

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Gene: Gm28578 (predicted gene 28578) Mus musculus
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Symbol: Gm28578
Name: predicted gene 28578
RGD ID: 9644099
MGI Page MGI
Description:
Type: ncrna
RefSeq Status: MODEL
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391945,318,052 - 45,319,186 (-)NCBIGRCm39GRCm39mm39
GRCm381945,329,613 - 45,330,747 (-)NCBIGRCm38GRCm38mm10GRCm38
Celera1946,080,537 - 46,107,981 (-)NCBICelera
Cytogenetic Map19C3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


PMID:18799693   PMID:24316575  



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Variants in Gm28578
33 total Variants

1 to 10 of 28 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
13506250Renmq1_mrenal mercury accumulation QTL 1 (mouse)192738559461385705Mouse
10412251Mnp_mmodifier of Niemann Pick type C1 (mouse)Not determined192023431454234461Mouse
1302170Tanidd1_mtally ho associated non-insulin dependednt diabetes mellitus 1 (mouse)Not determined193675259761420004Mouse
1301466T2dm2_mtype 2 diabetes mellitus 2 (mouse)Not determined193837605061420004Mouse
1301336Alcp23_malcohol preference locus 23 (mouse)Not determined191591260749912719Mouse
1558876W3q14_mweight 3 weeks QTL 14 (mouse)Not determined192231332653911504Mouse
1302104Lfp1_mlong free running period 1 (mouse)Not determined193918406461420004Mouse
1301633Alcp24_malcohol preference locus 24 (mouse)Not determined191591260749912719Mouse
14928311Manh85_mmandible shape 85 (mouse)191191478945914789Mouse
1301639Stnn_mstriatal neuron number (mouse)Not determined193395195261420004Mouse

1 to 10 of 28 rows





RefSeq Transcripts XR_386755 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC123058 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XR_386755
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391945,318,052 - 45,319,186 (-)NCBI
GRCm381945,329,613 - 45,330,747 (-)NCBI
Sequence:
RGD ID:15095076
Promoter ID:EPDNEWNC_M2991
Type:single initiation site
Name:Gm28578_1
Description:predicted gene 28578 [Source:MGI Symbol;Acc:MGI:5579284]
SO ACC ID:SO:0000170
Source:EPDNEWNC (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381945,338,319 - 45,338,379EPDNEWNC


Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000100417 ENTREZGENE
Ensembl Transcript ENSMUST00000269911 ENTREZGENE
MGD MGI:5579284 ENTREZGENE
NCBI Gene Gm28578 ENTREZGENE
PhenoGen Gm28578 PhenoGen