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Gene: Gm35041 (predicted gene, 35041) Mus musculus

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Analyze

Symbol:

Gm35041

Name:

predicted gene, 35041

RGD ID:

9642997

MGI Page

MGI

Description:

Type:

ncrna (Ensembl: lncRNA)

RefSeq Status:

MODEL

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	12	77,019,259 - 77,068,814 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	12	77,019,017 - 77,076,302 (+)	Ensembl		GRCm39 Ensembl
GRCm38	12	76,972,485 - 77,022,040 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	12	76,972,460 - 77,022,037 (+)	Ensembl	GRCm38		mm10	GRCm38
Celera	12	78,054,803 - 78,104,882 (+)	NCBI		Celera
Cytogenetic Map	12	C3	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

PMID:14610273

Variants in Gm35041
1874 total Variants

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
14746976	Manh73_m	mandible shape 73 (mouse)					12	65857131	99857131	Mouse
27226776	Tibl6_m	tibia length 6, 5 week (mouse)					12	60646786	92666774	Mouse
1301337	Cdcs8_m	cytokine deficiency colitis susceptibility 8 (mouse)			Not determined		12	64689083	98689229	Mouse
1300633	Cdcs7_m	cytokine deficiency colitis susceptibility 7 (mouse)			Not determined		12	64689083	98689229	Mouse
27226771	Tibl14_m	tibia length 14, 10 week (mouse)					12	68346774	98766259	Mouse
4142002	Tbqt3_m	tibia bone quality traits 3 (mouse)			Not determined		12	35285496	109936243	Mouse
12832727	Ahrq1_m	airway hyperresponsiveness QTL 1 (mouse)					12	54695910	82665939	Mouse
1558978	Cplaq10_m	circadian period of locomotor activity 10 (mouse)			Not determined		12	15341026	79040364	Mouse
1301574	Lmblgq5_m	limb length QTL 5 (mouse)			Not determined		12	17596447	80956883	Mouse
4141738	Tgq23_m	triglyceride QTL 23 (mouse)			Not determined			72112877	106112877	Mouse
13207568	Tcq14_m	total cholesterol QTL 14 (mouse)					12	11660001	97176774	Mouse
27226753	Femd7_m	femur midshaft diameter 7, 10 week (mouse)					12	9550000	84146774	Mouse
1357749	Vtbt13_m	vertebral trabecular bone trait 13 (mouse)			Not determined		12	53132002	87132145	Mouse
4142234	Tmc1m3_m	Tmc1 modifier 3 (mouse)			Not determined		12	5418440	77031203	Mouse
1301046	Par3_m	pulmonary adenoma resistance 3 (mouse)			Not determined		12	63956708	97956883	Mouse
1357757	Lnopy2_m	lens opacity 2 (mouse)			Not determined		12	52846626	86846796	Mouse
1301689	Skull18_m	skull morphology 18 (mouse)			Not determined		12	73887422	107887526	Mouse
10043895	Bw20_m	body weight QTL 20 (mouse)			Not determined		12	62308252	96308252	Mouse
27226797	Scvln19_m	sacral vertebrae length 2, 16 week (mouse)					12	62146786	99466259	Mouse
1357479	Splwt1_m	spleen weight 1 (mouse)			Not determined		12	41693175	90887526	Mouse
10043948	Pbft6_m	percent body fat 6 (mouse)			Not determined		12	61205427	95205427	Mouse
1301926	Adip6_m	adiposity 6 (mouse)			Not determined		12	73887422	107887526	Mouse
27226793	Feml10_m	femur length 10, 5 week (mouse)					12	68346774	113363620	Mouse
27226728	Tibl20_m	tibia length 20, 16 week (mouse)					12	59146786	93866774	Mouse
1301476	Pbwg12_m	postnatal body weight growth 12 (mouse)			Not determined		12	62040164	96040364	Mouse

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	XR_381700	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_381701	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_381703	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC124556	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC133174	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSMUST00000219581

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	77,019,234 - 77,068,811 (+)	Ensembl
GRCm38.p6 Ensembl	12	76,972,460 - 77,022,037 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000300383

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	77,019,017 - 77,069,852 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000300384

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	77,019,213 - 77,068,814 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000300385

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	77,019,694 - 77,068,953 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000300386

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	77,019,589 - 77,068,814 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000300387

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	77,019,715 - 77,068,831 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000300388

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	77,019,219 - 77,052,501 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000300389

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	77,019,715 - 77,052,502 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000300390

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	77,045,450 - 77,075,893 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000300391

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	77,045,463 - 77,075,893 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000300392

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	77,045,466 - 77,075,894 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000300393

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	77,045,470 - 77,075,891 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000300394

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	77,053,872 - 77,076,302 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000300395

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	77,053,894 - 77,076,302 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000300396

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	77,053,868 - 77,075,898 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000300397

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	77,053,880 - 77,075,896 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000300398

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	77,053,889 - 77,075,894 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000300399

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	77,053,891 - 77,075,894 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000300400

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	77,053,891 - 77,075,894 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000300401

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	77,053,889 - 77,075,891 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000300402

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	77,053,891 - 77,075,893 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000300403

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	77,053,889 - 77,075,891 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000300404

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	77,053,891 - 77,075,891 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000300405

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	77,053,891 - 77,075,891 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000300406

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	77,053,895 - 77,075,893 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000300407

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	77,053,896 - 77,075,891 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000300408

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	77,053,896 - 77,075,891 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000300409

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	77,053,905 - 77,075,894 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000300410

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	77,069,933 - 77,075,894 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000300411

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	77,049,383 - 77,052,499 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000300412

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	77,066,133 - 77,068,831 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000300413

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	77,049,883 - 77,052,501 (+)	Ensembl

RefSeq Acc Id:

XR_381700

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	12	77,066,162 - 77,068,814 (+)	NCBI
GRCm38	12	77,019,388 - 77,022,040 (+)	NCBI

Sequence:

show sequence

ACTTGGCTGGCCACAGCAGTAGCAAAACTGAGAGAGCCTCACCCATGCCTGGAAGACAGGTATCAGCTGTCTCTAGCTGACAGATCCTGCGAAGATCACTCAGAAAAGAGCCATTTCCTGGGCTGGTG
AGATGGTTGGTTCATCAGGAAAGGCGATCTGTCACGGGAGCCCATCACAGCCCGATTGGAGTGCACTTTATCTTTTCCTCTGCCCTGTCTGCTGAGCAAACATGCACATTTGGCATTTCAGCCCTGGA
AATTCTCAGACTCTCATTGCTCTTGCCCCAGATGGAAACTTCAGTGTCTTTGCAGAAAAATTCCACATTCTCCTGCAACCTAAACCCAGCTCTTTACTGAATCCTTAGGATATGCTGGGCTGTTGTGT
CCTCAAGAGGGTTATGATACTGCGCGTGGAATGAGAGAGATGTATGTGAAACAATTTGAAAACAGGAAA

hide sequence

RefSeq Acc Id:

XR_381701

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	12	77,019,259 - 77,068,814 (+)	NCBI
GRCm38	12	76,972,485 - 77,022,040 (+)	NCBI

Sequence:

show sequence

CTTCTGCTCCTTGGAAACAGCGTGACCATCTCCACTGCTGCTAGAGGAAGAGCCTCACCCATGCCTGGAAGACAGGTATCAGCTGTCTCTAGCTGACAGATCCTGCGAAGATCACTCAGAAAAGAGCC
ATTTCCTGGGCTGGTGAGATGGTTGGTTCATCAGGAAAGGCGATCTGTCACGGGAGCCCATCACAGCCCGATTGGAGTGCACTTTATCTTTTCCTCTGCCCTGTCTGCTGAGCAAACATGCACATTTG
GCATTTCAGCCCTGGAAATTCTCAGACTCTCATTGCTCTTGCCCCAGATGGAAACTTCAGTGTCTTTGCAGAAAAATTCCACATTCTCCTGCAACCTAAACCCAGCTCTTTACTGAATCCTTAGGATA
TGCTGGGCTGTTGTGTCCTCAAGAGGGTTATGATACTGCGCGTGGAATGAGAGAGATGTATGTGAAACAATTTGAAAACAGGAAA

hide sequence

RefSeq Acc Id:

XR_381703

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	12	77,019,703 - 77,068,814 (+)	NCBI
GRCm38	12	76,972,929 - 77,022,040 (+)	NCBI

Sequence:

show sequence

TGCATCCTTGACAGTTACTAACAAAAGAAGAGAGGATGCTCACGAGAAAAGAGAGCCTCACCCATGCCTGGAAGACAGGTATCAGCTGTCTCTAGCTGACAGATCCTGCGAAGATCACTCAGAAAAGA
GCCATTTCCTGGGCTGGTGAGATGGTTGGTTCATCAGGAAAGGCGATCTGTCACGGGAGCCCATCACAGCCCGATTGGAGTGCACTTTATCTTTTCCTCTGCCCTGTCTGCTGAGCAAACATGCACAT
TTGGCATTTCAGCCCTGGAAATTCTCAGACTCTCATTGCTCTTGCCCCAGATGGAAACTTCAGTGTCTTTGCAGAAAAATTCCACATTCTCCTGCAACCTAAACCCAGCTCTTTACTGAATCCTTAGG
ATATGCTGGGCTGTTGTGTCCTCAAGAGGGTTATGATACTGCGCGTGGAATGAGAGAGATGTATGTGAAACAATTTGAAAACAGGAAA

hide sequence

Database	Acc Id	Source(s)
Ensembl Genes	ENSMUSG00000112857	Ensembl, ENTREZGENE
Ensembl Transcript	ENSMUST00000300412	ENTREZGENE
MGD	MGI:5594200	ENTREZGENE
NCBI Gene	Gm35041	ENTREZGENE
PhenoGen	Gm35041	PhenoGen
RNAcentral	URS0000A87717	RNACentral

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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