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Gene: Gm26698 (predicted gene, 26698) Mus musculus

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Symbol:

Gm26698

Name:

predicted gene, 26698

RGD ID:

9642482

MGI Page

MGI

Description:

Type:

ncrna (Ensembl: lncRNA)

RefSeq Status:

VALIDATED

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	12	86,938,174 - 86,939,341 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	12	86,938,080 - 86,946,379 (-)	Ensembl		GRCm39 Ensembl
GRCm38	12	86,891,400 - 86,892,567 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
Celera	12	88,353,825 - 88,355,273 (-)	NCBI		Celera
Cytogenetic Map	12	D2	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

PMID:10349636	PMID:11042159	PMID:11076861	PMID:11217851	PMID:12466851	PMID:14610273	PMID:16141072	PMID:16141073	PMID:18799693

Variants in Gm26698
44 total Variants

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
39128213	Lwq23_m	liver weight QTL 10 (mouse)					12	80956708	113383533	Mouse
1300883	Ath21_m	atherosclerosis 21 (mouse)			Not determined		12	85961579	119961683	Mouse
14746976	Manh73_m	mandible shape 73 (mouse)					12	65857131	99857131	Mouse
27226776	Tibl6_m	tibia length 6, 5 week (mouse)					12	60646786	92666774	Mouse
1301337	Cdcs8_m	cytokine deficiency colitis susceptibility 8 (mouse)			Not determined		12	64689083	98689229	Mouse
1300633	Cdcs7_m	cytokine deficiency colitis susceptibility 7 (mouse)			Not determined		12	64689083	98689229	Mouse
25823169	Hrsq8_m	host response to SARS QTL 8, log titer (mouse)					12	81696245	108495368	Mouse
27226771	Tibl14_m	tibia length 14, 10 week (mouse)					12	68346774	98766259	Mouse
4142002	Tbqt3_m	tibia bone quality traits 3 (mouse)			Not determined		12	35285496	109936243	Mouse
4141738	Tgq23_m	triglyceride QTL 23 (mouse)			Not determined			72112877	106112877	Mouse
4141610	Tailaq1_m	tail length adjusted QTL 1 (mouse)			Not determined			80956708	113383533	Mouse
13207568	Tcq14_m	total cholesterol QTL 14 (mouse)					12	11660001	97176774	Mouse
13524846	Ppiq11_m	prepulse inhibition QTL 11 (mouse)					12	82666396	116666396	Mouse
1357749	Vtbt13_m	vertebral trabecular bone trait 13 (mouse)			Not determined		12	53132002	87132145	Mouse
10412156	Nociq3_m	nociceptive sensitivity inflammatory QTL 3 (mouse)			Not determined		12	86396075	114831653	Mouse
13524842	Ppiq10a_m	prepulse inhibition QTL 10a (mouse)					12	77512220	111512220	Mouse
1301879	Insq10_m	insulin QTL 10 (mouse)			Not determined		12	83532075	117532224	Mouse
1301046	Par3_m	pulmonary adenoma resistance 3 (mouse)			Not determined		12	63956708	97956883	Mouse
1301492	Dbsty3_m	diabesity 3 (mouse)			Not determined		12	83532075	117532224	Mouse
4141335	W6q10_m	weight 6 weeks QTL 10 (mouse)			Not determined			80956708	113383533	Mouse
1301689	Skull18_m	skull morphology 18 (mouse)			Not determined		12	73887422	107887526	Mouse
10043895	Bw20_m	body weight QTL 20 (mouse)			Not determined		12	62308252	96308252	Mouse
27226797	Scvln19_m	sacral vertebrae length 2, 16 week (mouse)					12	62146786	99466259	Mouse
1357479	Splwt1_m	spleen weight 1 (mouse)			Not determined		12	41693175	90887526	Mouse
10043948	Pbft6_m	percent body fat 6 (mouse)			Not determined		12	61205427	95205427	Mouse
1301926	Adip6_m	adiposity 6 (mouse)			Not determined		12	73887422	107887526	Mouse
27226793	Feml10_m	femur length 10, 5 week (mouse)					12	68346774	113363620	Mouse
27226728	Tibl20_m	tibia length 20, 16 week (mouse)					12	59146786	93866774	Mouse
1301476	Pbwg12_m	postnatal body weight growth 12 (mouse)			Not determined		12	62040164	96040364	Mouse
4142401	Egq10_m	early growth QTL 10 (mouse)			Not determined			80956708	113383533	Mouse
13524849	Ppiq11a_m	prepulse inhibition QTL 11a (mouse)					12	80989143	114989143	Mouse

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	NR_166902	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC110377	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK087306	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSMUST00000242157

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	86,938,113 - 86,939,362 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000242747

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	86,938,080 - 86,939,373 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000244133

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	86,938,080 - 86,939,373 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000358466

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	86,938,531 - 86,943,021 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000358467

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	86,938,174 - 86,939,883 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000358468

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	86,938,526 - 86,940,223 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000358469

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	86,938,529 - 86,939,341 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000358470

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	86,941,873 - 86,946,379 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000358471

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	86,941,883 - 86,944,107 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000358472

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	86,941,889 - 86,944,096 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000358473

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	12	86,941,777 - 86,943,142 (-)	Ensembl

RefSeq Acc Id:

NR_166902

RefSeq Status:

VALIDATED

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	12	86,938,174 - 86,939,341 (-)	NCBI
GRCm38	12	86,891,400 - 86,892,567 (-)	NCBI

Sequence:

show sequence

AATCTTTGGCAGAGGCCAGAAACAGGAGTAGGCTTCTTGGCTGCCTGTCCTGATAAACAATCTGTTCTTGGGAAGATTCCTAATGTCCAGGGCGCGCCACTGGGCCACGGAAGGCTTAAAGGAGAAGA
AGAGAGCAAAACCGGTGCGCGCCACACGGTTTCGGACCATCTACAAAGCTGTGCTCTAGGCGCGACAGCCCATCCCCCAGCGCGTGGGCGCAGAACCTGCTCTCGATCAAGGGAAACCAAGGCAGTAG
CAGAGAATGCCGAGTTGGGGCGGCCGCTGTAGAGCTTATTATAAAGCATAACGGGGGAAGCCAGACTGTGGGCAAAACAAAAGGAGAGACTATTTGGCGGAGTCGGAGGTCGCTGGGATCGAAACTCC
CGAGGCAAGAAAGCTGGCTGTGGATTTTGCAGCGGGGATATTGTGTGAGCAACCAGGCAGAAATTGGCAATATGTAAAAGTGGGAGGGGGGAGAGAGTGGGCGGAAAGGCAAATCAGTGCCTAGAAGG
CTGCGCACGGCTGGGAAATGTCACCAAGGAGAGCGCAGTGGCACCGAATAAAAGATGAATGATAGACTACCTTTTGGAAAACGAATATAAAAATAGTATTGAAGGTGAGAAGTCCGCCTCTTCGCTGA
AAAGCGGATCCATTCCGCACTGCTTGCCTTCAAGCCCCGACATCCAGGCAGCTCTAATCTCCCTTGTATCCAAGAAGTCAGGGCCAGGCTCGCTTTCCTTCGGGTTTAATTACACGAAAATGCTGAAC
AAAAACCCTGTAATTACACCCTTAGTCCCCGCCACTCAGGCCCTGCGCACTTCCTGCCTAGTTTTGTTTTTTTGATTTTTGTTTTGTTTTGGTTTTTTGTTCTCTCTTTTTTTAATTTTTTTAAAAAG
AGGGGTCATTGCCTCTTTCTTTGCAAATTGGCCAAAACAAAAAAACCTAAAGGCACTAAATAAATCTTTAACACTTTAA

hide sequence

RGD ID:

15094155

Promoter ID:

EPDNEWNC_M2069

Type:

single initiation site

Name:

Gm26698_1

Description:

predicted gene, 26698 [Source:MGI Symbol;Acc:MGI:5477192]

SO ACC ID:

SO:0000170

Source:

EPDNEWNC (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	12	86,892,567 - 86,892,627	EPDNEWNC

Database	Acc Id	Source(s)
Ensembl Genes	ENSMUSG00000120265	Ensembl, ENTREZGENE
Ensembl Transcript	ENSMUST00000242747	ENTREZGENE
MGD	MGI:5477192	ENTREZGENE
NCBI Gene	Gm26698	ENTREZGENE
PhenoGen	Gm26698	PhenoGen
RNAcentral	URS000198124C	RNACentral
	URS00025E4E9A	RNACentral
	URS00025F1E33	RNACentral
	URS00025F7A93	RNACentral

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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