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Gene: Gm33023 (predicted gene, 33023) Mus musculus

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Symbol:

Gm33023

Name:

predicted gene, 33023

RGD ID:

9632569

MGI Page

MGI

Description:

Type:

ncrna (Ensembl: lncRNA)

RefSeq Status:

MODEL

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	105,358,034 - 105,362,473 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	105,351,107 - 105,386,195 (+)	Ensembl		GRCm39 Ensembl
GRCm38	8	104,631,402 - 104,635,841 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	104,630,832 - 104,636,492 (+)	Ensembl	GRCm38		mm10	GRCm38
Celera	8	108,863,999 - 108,868,437 (+)	NCBI		Celera
Cytogenetic Map	8	D3	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Variants in Gm33023
303 total Variants

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1300560	Tgl1_m	triglyceride level 1 (mouse)			Not determined		8	102486208	111650036	Mouse
4141435	Fbtq3_m	femoral bone trait QTL 3 (mouse)			Not determined		8	100965309	130127694	Mouse
11252141	Fdr2_m	fat response to dietary restriction 2 (mouse)					8	98390634	130127694	Mouse
1357470	Obq16_m	obesity QTL 16 (mouse)			Not determined		8	76411976	110412125	Mouse
1302105	Im1_m	Immunoregulatory 1 (mouse)			Not determined		8	99828531	130127694	Mouse
1301080	Sluc9_m	susceptibility to lung cancer 9 (mouse)			Not determined		8	99828531	130127694	Mouse
1558875	Eae31_m	experimental allergic encephalomyelitis susceptibility 31 (mouse)			Not determined		8	35109930	115563747	Mouse
10412234	Nhdlq14_m	non-HDL QTL 14 (mouse)			Not determined		8	76411976	110412125	Mouse
1301766	Desp1_m	despair 1 (mouse)			Not determined		8	85486208	119486373	Mouse
1301253	Skmw2_m	skeletal muscle weight 2 (mouse)			Not determined		8	86443553	120443701	Mouse
1301316	Dntcs1_m	dental caries susceptibility 1 (mouse)			Not determined		8	103443553	127781786	Mouse
4140967	Bmd39_m	bone mineral density 39 (mouse)			Not determined		8	32506572	117965439	Mouse
1357708	Orq1_m	ovulation rate QTL 1 (mouse)			Not determined		8	71740461	124622354	Mouse
1300681	Pgia22_m	proteoglycan induced arthritis 22 (mouse)			Not determined		8	102486208	116025457	Mouse
10755519	Wbc1_m	white blood cell count 1 (mouse)					8	82345783	116345783	Mouse
27226754	Femd6_m	femur midshaft diameter 6, 10 week (mouse)					8	37867154	110326632	Mouse
1301581	Char2_m	P. chabaudi malaria resistance QTL 2 (mouse)			Not determined		8	79808806	113809031	Mouse
1301874	Hdlq16_m	HDL QTL 16 (mouse)			Not determined		8	76411976	110412125	Mouse
1357494	Obsty2_m	obesity 2 (mouse)			Not determined		8	96245241	129745061	Mouse
1301872	Cd4ts3_m	CD4 T cell subset 3 (mouse)			Not determined		8	72122809	106123021	Mouse
10045619	Heal14_m	wound healing/regeneration 14 (mouse)			Not determined		8	86443553	120443701	Mouse
1558780	Idd22_m	insulin dependent diabetes susceptibility 22 (mouse)			Not determined		8	71829531	105829637	Mouse
1300920	Pitm3_m	prion incubation time 3 (mouse)			Not determined		8	73929123	107929226	Mouse
12880431	Fgf23lq2_m	FGF23 serum level QTL 2 (mouse)					8	97626632	130127694	Mouse
10755530	Wbc2_m	white blood cell count 2 (mouse)					8	81819296	115819296	Mouse
1302049	Heal1_m	wound healing/regeneration 1 (mouse)			Not determined		8	86443553	120443701	Mouse
27226796	Scvln16_m	sacral vertebrae length 2, 16 week (mouse)					8	89726628	130027694	Mouse
27095912	Pglq14_m	pelvic girdle length QTL 14, 16 week (mouse)					8	74126628	126826739	Mouse
4142023	W3q5_m	weight 3 weeks QTL 5 (mouse)			Not determined			71740461	124622354	Mouse
1301099	Cbm2_m	cerebellum weight 2 (mouse)			Not determined		8	79245241	113245331	Mouse
1301481	Lith11_m	lithogenic gene 11 (mouse)			Not determined		8	98563635	130127694	Mouse
11532692	Sluc38a_m	susceptibility to lung cancer 38a (mouse)					8	105033977	130127694	Mouse
11532691	Sluc38_m	susceptibility to lung cancer 38 (mouse)					8	105033977	130127694	Mouse
1558890	Lith18_m	lithogenic gene 18 (mouse)			Not determined		8	76402145	110402251	Mouse

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	XR_001778640	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_387971	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_387973	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_879143	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC138617	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSMUST00000212328

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	105,358,069 - 105,362,478 (+)	Ensembl
GRCm38.p6 Ensembl	8	104,631,438 - 104,635,844 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000212450

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	105,357,438 - 105,363,124 (+)	Ensembl
GRCm38.p6 Ensembl	8	104,630,832 - 104,636,492 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000305671

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	105,358,280 - 105,386,195 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000305855

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	105,351,114 - 105,362,480 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000305856

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	105,351,107 - 105,362,473 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000305857

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	105,358,008 - 105,364,266 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000305858

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	105,356,834 - 105,362,480 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000305859

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	105,357,389 - 105,362,480 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000305860

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	105,357,978 - 105,362,483 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000305861

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	105,358,020 - 105,362,483 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000305862

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	105,358,023 - 105,362,478 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000305863

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	105,358,025 - 105,362,480 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000305864

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	105,358,029 - 105,362,480 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000305865

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	105,358,032 - 105,362,477 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000305866

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	105,358,032 - 105,362,475 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000305867

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	105,358,032 - 105,362,473 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000305868

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	105,358,054 - 105,362,478 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000305869

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	105,358,075 - 105,362,473 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000305870

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	105,358,106 - 105,362,478 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000305871

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	105,358,106 - 105,362,473 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000305872

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	105,358,115 - 105,362,480 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000305873

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	105,358,140 - 105,362,483 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000305874

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	105,358,160 - 105,362,479 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000305875

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	105,358,180 - 105,362,478 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000305876

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	105,358,191 - 105,362,480 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000305877

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	105,358,200 - 105,362,473 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000305878

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	105,358,272 - 105,362,478 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000305879

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	105,358,305 - 105,362,473 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000305880

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	105,358,319 - 105,362,473 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000305881

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	8	105,360,072 - 105,362,473 (+)	Ensembl

RefSeq Acc Id:

XR_001778640

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	8	105,358,170 - 105,362,473 (+)	NCBI
GRCm38	8	104,631,546 - 104,635,841 (+)	NCBI

Sequence:

show sequence

GGGGTGTTGGAGGGGAGGGATGGGGAGTGTGCGTTGAGGAGGGTGCACCAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCATTGATACAGAGGCTGCCAGTAGTGGGTAAAGTGGA
GTGAACTACCACTCCATCTTTAAAGATGAATTTTCCCTTCTGCTCACTCCTGGCCTATTACCCAAGTCAGTAGACGTATTATGGACACGCTCAGAACCTATGAAGCCCGTTCCTCCAGCAGGCACGTG
TAAATTGTCATCATCCTTGGTTGGATGGGGCAGGCTGAGTGAATCTGTGGACTCTCTCTTGCTTCTGCTTCAGTATCTTCAGGATGATGTTCTGTCCTGAGGAAGGTCAGAGAACCCAGCACAGCTGT
GGTTCCAGAAAGTTCTTTGGGTGCTGGTCCAGTATTCACAGATGGTATGCTGCAGACAGCCAGTGGCCAGCCACCAAGGAGTCAAGAATGTCAAAGGGACATCATGCCAGCAGCTTGGTGTTTCTCAT
CCCGCTGGCCCAGCTACCAGGAAAACCAGAAGAATGACTCAAAAGCACCTGCCTATCTTGAACATGCCTGAACACAGATACCATGGTCACCTCAGACAGATGGGGCTTGCCAAGCTGAGGTTCACATA
TGGGGAGGCCTACAGTTTGGGAAGGATCTTTCAGCTCTTTCACTTGTGAACATGGAGGACCAGGTGGTTGGAAGATCATTTGAGATAGACCAAGGGCAAGCTTACATGTGCATAGAGCAGTCCCAAAG
AGATTGTTGTGACTATCCACATGTCAATAGATGAGAATCTGACTGA

hide sequence

RefSeq Acc Id:

XR_387971

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	8	105,359,667 - 105,362,473 (+)	NCBI
GRCm38	8	104,633,035 - 104,635,841 (+)	NCBI

Sequence:

show sequence

CAGAAATCTATCTGCCTCTGCCTCCGGAGTGCTGGGATTAAAGGCTTGCGCCACCAAGTCTGGC
GGTTCTCTTGTTCTTAAGGCCCTCAAATAAGCAAAAGCTGATCCAAGGCACCTGCTTATGTGTCCGTTCCATGAAGGAGGGATCATGGAGGCCTAGGAAGTCCCTGCTGGCTTTTGTTTCTTAGATAA
GACTCAGTGGGAAGAGGGAGTCAGGGGCTTCTGCTTCTCCTGACCGGTCAGAAGCTTCTAGAGTCAGCCCTCTGCTTCCCAGCAGGAACCCAAGTTGGCCGTTCATGACACAAACACCCCAAGGCCAC
ACATACAGTGTGGCTGGAAAGAACCTTGAGGTGTCCAGGAGAGTGCCTGGCAGAATACAGCTAGAGGATAGCTGTAGACCTTCCCAGAAGGGGCCACACAGGGAAACTGGGCTGACTTTCCCCTCTGG
TAATTTGAGCTTTTGACTGCAACAGTGTATCTTCTTTGCCGAGGCAACGCCATCCACACAGAGCCACTCAGACCCCAAGCATTCCTTGGCTACGCCAACAGGCCCTGCGATGATCATCAGGAGCCTAG
GTGTTGCCAGGAGCCTCACGACCCAATATCAGGACACGACCTTAGGATCATTTCCTGCTACACTTCTGGTCCTCTCAGCTCTCTCAGCTGCCCAGAAGGAACAAACAGCAGGCACGTGTAAATTGTCA
TCATCCTTGGTTGGATGGGGCAGGCTGAGTGAATCTGTGGACTCTCTCTTGCTTCTGCTTCAGTATCTTCAGGATGATGTTCTGTCCTGAGGAAGGTCAGAGAACCCAGCACAGCTGTGGTTCCAGAA
AGTTCTTTGGGTGCTGGTCCAGTATTCACAGATGGTATGCTGCAGACAGCCAGTGGCCAGCCACCAAGGAGTCAAGAATGTCAAAGGGACATCATGCCAGCAGCTTGGTGTTTCTCATCCCGCTGGCC
CAGCTACCAGGAAAACCAGAAGAATGACTCAAAAGCACCTGCCTATCTTGAACATGCCTGAACACAGATACCATGGTCACCTCAGACAGATGGGGCTTGCCAAGCTGAGGTTCACATATGGGGAGGCC
TACAGTTTGGGAAGGATCTTTCAGCTCTTTCACTTGTGAACATGGAGGACCAGGTGGTTGGAAGATCATTTGAGATAGACCAAGGGCAAGCTTACATGTGCATAGAGCAGTCCCAAAGAGATTGTTGT
GACTATCCACATGTCAATAGATGAGAATCTGACTGA

hide sequence

RefSeq Acc Id:

XR_387973

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	8	105,358,034 - 105,362,473 (+)	NCBI
GRCm38	8	104,631,402 - 104,635,841 (+)	NCBI

Sequence:

show sequence

CCTCCCGGGCTGCTGCAAAGGCTGACGCATCCACTCGCCCTCGGGAATCCCCCACCTCCCTTCT
AGGACCGCAAACCCGCCAGGGGCGGGGCAGGCAACGCCATCCACACAGAGCCACTCAGACCCCAAGCATTCCTTGGCTACGCCAACAGGCCCTGCGATGATCATCAGGAGCCTAGGTGTTGCCAGGAG
CCTCACGACCCAATATCAGGACACGACCTTAGGATCATTTCCTGCTACACTTCTGGTCCTCTCAGCTCTCTCAGCTGCCCAGAAGGAACAAACAGCAGGCACGTGTAAATTGTCATCATCCTTGGTTG
GATGGGGCAGGCTGAGTGAATCTGTGGACTCTCTCTTGCTTCTGCTTCAGTATCTTCAGGATGATGTTCTGTCCTGAGGAAGGTCAGAGAACCCAGCACAGCTGTGGTTCCAGAAAGTTCTTTGGGTG
CTGGTCCAGTATTCACAGATGGTATGCTGCAGACAGCCAGTGGCCAGCCACCAAGGAGTCAAGAATGTCAAAGGGACATCATGCCAGCAGCTTGGTGTTTCTCATCCCGCTGGCCCAGCTACCAGGAA
AACCAGAAGAATGACTCAAAAGCACCTGCCTATCTTGAACATGCCTGAACACAGATACCATGGTCACCTCAGACAGATGGGGCTTGCCAAGCTGAGGTTCACATATGGGGAGGCCTACAGTTTGGGAA
GGATCTTTCAGCTCTTTCACTTGTGAACATGGAGGACCAGGTGGTTGGAAGATCATTTGAGATAGACCAAGGGCAAGCTTACATGTGCATAGAGCAGTCCCAAAGAGATTGTTGTGACTATCCACATG
TCAATAGATGAGAATCTGACTGA

hide sequence

RefSeq Acc Id:

XR_879143

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	8	105,358,034 - 105,362,473 (+)	NCBI
GRCm38	8	104,631,402 - 104,635,841 (+)	NCBI

Sequence:

show sequence

CCTCCCGGGCTGCTGCAAAGGCTGACGCATCCACTCGCCCTCGGGAATCCCCCACCTCCCTTCT
AGGACCGCAAACCCGCCAGGGGCGGGGCAGCAGGCACGTGTAAATTGTCATCATCCTTGGTTGGATGGGGCAGGCTGAGTGAATCTGTGGACTCTCTCTTGCTTCTGCTTCAGTATCTTCAGGATGAT
GTTCTGTCCTGAGGAAGGTCAGAGAACCCAGCACAGCTGTGGTTCCAGAAAGTTCTTTGGGTGCTGGTCCAGTATTCACAGATGGTATGCTGCAGACAGCCAGTGGCCAGCCACCAAGGAGTCAAGAA
TGTCAAAGGGACATCATGCCAGCAGCTTGGTGTTTCTCATCCCGCTGGCCCAGCTACCAGGAAAACCAGAAGAATGACTCAAAAGCACCTGCCTATCTTGAACATGCCTGAACACAGATACCATGGTC
ACCTCAGACAGATGGGGCTTGCCAAGCTGAGGTTCACATATGGGGAGGCCTACAGTTTGGGAAGGATCTTTCAGCTCTTTCACTTGTGAACATGGAGGACCAGGTGGTTGGAAGATCATTTGAGATAG
ACCAAGGGCAAGCTTACATGTGCATAGAGCAGTCCCAAAGAGATTGTTGTGACTATCCACATGTCAATAGATGAGAATCTGACTGA

hide sequence

RGD ID:

15093504

Promoter ID:

EPDNEWNC_M1412

Type:

single initiation site

Name:

Gm33023_1

Description:

predicted gene, 33023 [Source:MGI Symbol;Acc:MGI:5592182]

SO ACC ID:

SO:0000170

Source:

EPDNEWNC (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	8	104,631,400 - 104,631,460	EPDNEWNC

Database	Acc Id	Source(s)
Ensembl Genes	ENSMUSG00000110652	Ensembl, ENTREZGENE
Ensembl Transcript	ENSMUST00000305860	ENTREZGENE
	ENSMUST00000305866	ENTREZGENE
	ENSMUST00000305873	ENTREZGENE
MGD	MGI:5592182	ENTREZGENE
NCBI Gene	Gm33023	ENTREZGENE
PhenoGen	Gm33023	PhenoGen
RNAcentral	URS0000A783F9	RNACentral
	URS0000A89749	RNACentral

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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