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Gene: Gm34728 (predicted gene, 34728) Mus musculus

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Symbol:

Gm34728 (Ensembl: 1700017L05Rik)

Name:

predicted gene, 34728 (Ensembl:RIKEN cDNA 1700017L05 gene)

RGD ID:

9615858

MGI Page

MGI

Description:

Type:

ncrna (Ensembl: lncRNA)

RefSeq Status:

MODEL

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	77,581,565 - 77,595,550 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	77,581,834 - 77,621,066 (+)	Ensembl		GRCm39 Ensembl
GRCm38	5	77,433,718 - 77,447,675 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	77,434,034 - 77,473,219 (+)	Ensembl	GRCm38		mm10	GRCm38
Cytogenetic Map	5	C3.3	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Variants in Gm34728
783 total Variants

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1301843	Listr1_m	listeriosis resistance 1 (mouse)			Not determined		5	60246081	94246203	Mouse
10043993	Hbnr10_m	Heligmosomoides bakeri nematode resistance 10 (mouse)			Not determined		5	72418876	106419011	Mouse
27226719	Tibw6_m	tibia width 6, proximal, 16 week (mouse)					5	72857343	139985755	Mouse
4140990	Lgq6_m	late growth QTL 6 (mouse)			Not determined			32133234	100777931	Mouse
1301010	ahl2_m	age related hearing loss 2 (mouse)			Not determined		5	62650568	96650688	Mouse
4141438	Skmw13_m	skeletal muscle weight 13 (mouse)			Not determined		5	76190263	110190479	Mouse
1301713	Dbsty2_m	diabesity 2 (mouse)			Not determined		5	76445064	110445225	Mouse
11041899	Lmr24a_m	leishmaniasis resistance 24a (mouse)					5	52694462	107321041	Mouse
14746981	Manh57_m	mandible shape 57 (mouse)					5	47169742	81169742	Mouse
12910784	Pwgrq15_m	post-weaning growth rate QTL 15 (mouse)					5	77175823	97658215	Mouse
1301524	Lmb2_m	lupus in MRL and B6 F2 cross (mouse)			Not determined		5	37581488	112465722	Mouse
25314315	Mlh1fc4_m	MLH1 foci count 4 (mouse)					5	74460661	132528839	Mouse
10045972	Tir5_m	trypanosome infection response 5 (mouse)			Not determined		5	63705442	104387065	Mouse
4142064	Tmc1m4_m	Tmc1 modifier 4 (mouse)			Not determined		5	54500177	127001072	Mouse
1300931	Cocrb6_m	cocaine related behavior 6 (mouse)			Not determined		5	76445064	110445225	Mouse
1301698	Pcfm4_m	periosteal circumference and femur length 4 (mouse)			Not determined		5	44585843	78585965	Mouse
4142317	Rgcs1_m	retinal ganglion cell susceptible 1 (mouse)			Not determined			55388334	108762627	Mouse
1301829	Thyls2_m	thymic lymphoma susceptibility 2 (mouse)			Not determined		5	76445064	110445225	Mouse
4141219	W10q16_m	weight 10 weeks QTL 16 (mouse)			Not determined			32133234	100777931	Mouse
12904740	M1fscn2_m	modifier 1 of Fscn2 (mouse)					5	66529661	100529661	Mouse
10043962	Obq27_m	obesity QTL 27 (mouse)			Not determined		5	56285655	90285655	Mouse
4142428	Modvl1_m	modifier of vacuolated lens 1 (mouse)			Not determined			62650568	96650688	Mouse
1357431	Cia27_m	collagen induced arthritis 27 (mouse)			Not determined		5	75315348	120018629	Mouse
11040589	Lmr3a_m	leishmaniasis resistance 3a (mouse)					5	59602801	93602980	Mouse
12910816	Ogrq2_m	overall growth rate QTL 2 (mouse)					5	77175823	97658215	Mouse
11040590	Lmr3b_m	leishmaniasis resistance 3b (mouse)					5	59602801	93602980	Mouse
11040591	Lmr3c_m	leishmaniasis resistance 3c (mouse)					5	59602801	93602980	Mouse
12904739	M2fscn2_m	modifier 2 of FSCN2 (mouse)					5	66529661	100529661	Mouse
1301243	Bmd2_m	bone mineral density 2 (mouse)			Not determined		5	55388334	100455525	Mouse
1301691	Cdcs10_m	cytokine deficiency colitis susceptibility 10 (mouse)			Not determined		5	76280786	110280917	Mouse
13207584	Mwmlpt4_m	Morris water maze latency to platform, training, 4 (mouse)					5	46322606	80322606	Mouse
11041665	Lmr24_m	leishmaniasis resistance 24 (mouse)					5	52694462	107321041	Mouse
1300986	Hdlq2_m	HDL QTL 2 (mouse)			Not determined		5	76280786	110280917	Mouse
13207588	Mwmlpa4_m	Morris water maze latency to platform, all, 4 (mouse)					5	46322606	80322606	Mouse
1301693	Sle6_m	systemic lupus erythematosus susceptibility 6 (mouse)			Not determined		5	8890693	87841837	Mouse
11049560	Lmr24d_m	leishmaniasis resistance 24d (mouse)					5	64374877	98374996	Mouse
26884395	Humsd2_m	humerus midshaft diameter 2, 10 week (mouse)					5	70057343	132528839	Mouse
13464249	Ahl16_m	age related hearing loss, early onset 16 (mouse)					5	76445064	110445225	Mouse
13464248	Ahl13_m	age related hearing loss, early onset 13 (mouse)					5	55645874	89645995	Mouse
11252124	Modvl6_m	modifier of vacuolated lens 6 (mouse)					5	62650568	96650688	Mouse
13464250	Ahl15_m	age related hearing loss, early onset 15 (mouse)					5	62650568	96650688	Mouse
11040592	Lmr3d_m	leishmaniasis resistance 3d (mouse)					5	59602801	93602980	Mouse
11341716	Rvfs3_m	Rift Valley fever susceptibility 3 (mouse)					5	26441234	138455402	Mouse
13464247	Ahl14_m	age related hearing loss, early onset 14 (mouse)					5	60403062	94403160	Mouse
4141124	Dshv2_m	dorsal hippocampal volume 2 (mouse)			Not determined		5	75315348	98019803	Mouse
10044005	Ahl7_m	age related hearing loss 7 (mouse)			Not determined		5	58330502	92330641	Mouse
13506928	Recrq8_m	recombination rate in male meiosis QTL 8 (mouse)					5	74460661	132528839	Mouse
4141505	Chlq14_m	circulating hormone level QTL 14 (mouse)			Not determined		5	76280786	110280917	Mouse

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	XR_001784885	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001784886	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_004942623	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC122396	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSMUST00000201510

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	77,581,881 - 77,621,066 (+)	Ensembl
GRCm38.p6 Ensembl	5	77,434,034 - 77,473,219 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000201654

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	77,613,312 - 77,616,712 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000376823

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	77,581,834 - 77,616,704 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000376824

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	77,610,550 - 77,616,704 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000376825

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	77,613,271 - 77,616,942 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000376826

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	77,613,321 - 77,616,704 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000376827

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	77,613,342 - 77,616,704 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000376828

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	77,613,900 - 77,616,712 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000376829

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	77,613,915 - 77,616,704 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000377243

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	77,581,910 - 77,595,569 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000377244

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	77,582,256 - 77,595,583 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000377245

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	77,582,295 - 77,595,557 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000377246

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	77,582,283 - 77,594,111 (+)	Ensembl

Ensembl Acc Id:

ENSMUST00000377247

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	5	77,582,283 - 77,583,777 (+)	Ensembl

RefSeq Acc Id:

XR_001784885

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	5	77,582,226 - 77,595,550 (+)	NCBI

Sequence:

show sequence

CCTTTAAACTTTACATAGAAGTTAGTCCATAGTTCTGCGGACTTTGTAGACCTGGCTAAGAGGCAGGTTGACAGAGCTTGCGAAGGAGCTGCCCTAAGAGATGCTGGGGTGAGCGTAGATGTGTTTTC
CAGCTCAGGTTTCTTTCTGTTACTGTTCCGAAGCATCCAGACGCTTGTTGTTCCTAGTCCCGATGAAGTCAAGGTCCCCTCGTGTGGAAACAGAAACAAACCCACAACGCTGTCTGACAGCGGCGGCT
GGATGTGTCTGAATGCGTGGCGACTCCGGGAAGTCCTCAGAACCATGCAGGTCCTTGAAGAAGCTGCTGTCTTACTGTGTTGTGGGAAAGGAGAGAAAACAGCACAGTTGAGTGAGTCTTCTGTGTGG
GGGAAGAGTACACCTCCACAAAGGGAGATCTGCATGCTACGTTTCAGCTTTCCTGTTGAAAGTGCATCCCAGAGAGAGCCACAGCCCACAGCCAATGGAGTCTGCACTTGAGTTCTGCACTTGAGGTT
CCCCATCCCCCGGGTGTGTCATGTCAGAGCAGCTGACTGTGGCAGAGGGGAAACCAGGAACTCTGCCTGCATCTTTTGATCCTCCTTACCCTCATCTCAAAATAGCCCCTGTGCCAAAGTGACGGATT
AGAGGATGCTGTACTCCAAATCCTTTCACTGGGAAGAGGGTCCAGACTTGTAAATGCCCTGGCTGGCAAAACTCCAACGCATTTGTTGCAGGGTACCTTTGTACATGGCAGGGTGAGAGTCAATCTGA
CGCTTAGCCAACCCACGGGATGCTACACTTAAACAATGCACTAATTGAACGAGCTAGTGAAATTAAGTTTCAAGAGATTGTATTTATTTTTATTAAAAAACTCACCTTAATTGTGTGGTATATCTTAG
AGTCTAGTACTTAATGAAGCTGCTTAATGAAGAATTCTATTTTGGCTTTAGAAAATATCTATGTTAACCAGGCCCGTGTAAAGAATAGCTATTTTTACCACTAGGCAATTACTAAGGAACCATTATCT
ACTTTATCCCAATTATGAGATGCATAACTTGGAAGAAATAAAGAGCTTGGCGG

hide sequence

RefSeq Acc Id:

XR_001784886

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	5	77,581,565 - 77,595,550 (+)	NCBI

Sequence:

show sequence

CTCTCCGTGACCAGTGTGGTGTGTTTTTAGCTCAGCTAGGCGGCTCTATAGCACCTGGGATGCA
GAACCAGCCAGACATTCCCCCAAACACCACAGCAAGACTCTTTAAACAGCACGATGTTTGGGAAATTCTCCACACCTCCCGTATTCACTGCTAGGTTATTGGATAGGCTTCAGAAGGCAGCTCCAGGC
AGTGCCAAGTCGAACCAGCCCCATCTATGTGTGTTTTGTTCGGCAGGTTTTCTGCACACCAGATGAATTGCACACACACACACACACACACACACACACACACACACACACACAGAATGTATGCACAT
ACACACACTGCTCTGTGGCTTGCTTTTTCTAGCAGGAGCACTTTGGCCAGCGACCAGAGGCAGACAGCAAAGGTGAGCAGCATCCAGACGCTTGTTGTTCCTAGTCCCGATGAAGTCAAGGTCCCCTC
GTGTGGAAACAGAAACAAACCCACAACGCTGTCTGACAGCGGCGGCTGGATGTGTCTGAATGCGTGGCGACTCCGGGAAGTCCTCAGAACCATGCAGGTCCTTGAAGAAGCTGCTGTCTTACTGTGTT
GTGGGAAAGGAGAGAAAACAGCACAGTTGAGTGAGTCTTCTGTGTGGGGGAAGAGTACACCTCCACAAAGGGAGATCTGCATGCTACGTTTCAGCTTTCCTGTTGAAAGTGCATCCCAGAGAGAGCCA
CAGCCCACAGCCAATGGAGTCTGCACTTGAGTTCTGCACTTGAGGTTCCCCATCCCCCGGGTGTGTCATGTCAGAGCAGCTGACTGTGGCAGAGGGGAAACCAGGAACTCTGCCTGCATCTTTTGATC
CTCCTTACCCTCATCTCAAAATAGCCCCTGTGCCAAAGTGACGGATTAGAGGATGCTGTACTCCAAATCCTTTCACTGGGAAGAGGGTCCAGACTTGTAAATGCCCTGGCTGGCAAAACTCCAACGCA
TTTGTTGCAGGGTACCTTTGTACATGGCAGGGTGAGAGTCAATCTGACGCTTAGCCAACCCACGGGATGCTACACTTAAACAATGCACTAATTGAACGAGCTAGTGAAATTAAGTTTCAAGAGATTGT
ATTTATTTTTATTAAAAAACTCACCTTAATTGTGTGGTATATCTTAGAGTCTAGTACTTAATGAAGCTGCTTAATGAAGAATTCTATTTTGGCTTTAGAAAATATCTATGTTAACCAGGCCCGTGTAA
AGAATAGCTATTTTTACCACTAGGCAATTACTAAGGAACCATTATCTACTTTATCCCAATTATGAGATGCATAACTTGGAAGAAATAAAGAGCTTGGCGG

hide sequence

RefSeq Acc Id:

XR_004942623

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	5	77,581,565 - 77,595,550 (+)	NCBI

Sequence:

show sequence

CTCTCCGTGACCAGTGTGGTGTGTTTTTAGCTCAGCTAGGCGGCTCTATAGCACCTGGGATGCAGAACCAGCCAGACATTCCCCCAAACACCACAGCAAGACTCTTTAAACAGCACGATGTTTGGGAA
ATTCTCCACACCTCCCGTATTCACTGCTAGGTTATTGGATAGGCTTCAGAAGGCAGCTCCAGGCAGTGCCAAGTCGAACCAGCCCCATCTATGTGTGTTTTGTTCGGCAGGTTTTCTGCACACCAGAT
GAATTGCACACACACACACACACACACACACACACACACACACACACACAGAATGTATGCACATACACACACTGCTCTGTGGCTTGCTTTTTCTAGCAGGAGCACTTTGGCCAGCGACCAGAGGCAGA
CAGCAAAGGTGAGCAGGGAAGTCCTCAGAACCATGCAGGTCCTTGAAGAAGCTGCTGTCTTACTGTGTTGTGGGAAAGGAGAGAAAACAGCACAGTTGAGTGAGTCTTCTGTGTGGGGGAAGAGTACA
CCTCCACAAAGGGAGATCTGCATGCTACGTTTCAGCTTTCCTGTTGAAAGTGCATCCCAGAGAGAGCCACAGCCCACAGCCAATGGAGTCTGCACTTGAGTTCTGCACTTGAGGTTCCCCATCCCCCG
GGTGTGTCATGTCAGAGCAGCTGACTGTGGCAGAGGGGAAACCAGGAACTCTGCCTGCATCTTTTGATCCTCCTTACCCTCATCTCAAAATAGCCCCTGTGCCAAAGTGACGGATTAGAGGATGCTGT
ACTCCAAATCCTTTCACTGGGAAGAGGGTCCAGACTTGTAAATGCCCTGGCTGGCAAAACTCCAACGCATTTGTTGCAGGGTACCTTTGTACATGGCAGGGTGAGAGTCAATCTGACGCTTAGCCAAC
CCACGGGATGCTACACTTAAACAATGCACTAATTGAACGAGCTAGTGAAATTAAGTTTCAAGAGATTGTATTTATTTTTATTAAAAAACTCACCTTAATTGTGTGGTATATCTTAGAGTCTAGTACTT
AATGAAGCTGCTTAATGAAGAATTCTATTTTGGCTTTAGAAAATATCTATGTTAACCAGGCCCGTGTAAAGAATAGCTATTTTTACCACTAGGCAATTACTAAGGAACCATTATCTACTTTATCCCAA
TTATGAGATGCATAACTTGGAAGAAATAAAGAGCTTGGCGG

hide sequence

Database	Acc Id	Source(s)
Ensembl Genes	ENSMUSG00000106906	Ensembl
	ENSMUSG00000107232	Ensembl, ENTREZGENE
Ensembl Transcript	ENSMUST00000377244	ENTREZGENE
MGD	MGI:5593887	ENTREZGENE
NCBI Gene	Gm34728	ENTREZGENE
PhenoGen	Gm34728	PhenoGen
RNAcentral	URS00008C4370	RNACentral

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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