Ube1y1 (ubiquitin-like modifier-activating enzyme 1 Y) - Rat Genome Database

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Gene: Ube1y1 (ubiquitin-like modifier-activating enzyme 1 Y) Rattus norvegicus
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Symbol: Ube1y1
Name: ubiquitin-like modifier-activating enzyme 1 Y
RGD ID: 9252298
Description: Predicted to enable ATP binding activity and ubiquitin-like modifier activating enzyme activity. Predicted to be involved in protein ubiquitination.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC103694556; LOC103694557; ubiquitin-like modifier activating enzyme 1, Y-linked
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8Y810,439 - 832,977 (+)NCBIGRCr8
mRatBN7.2Y786,728 - 809,248 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblY788,868 - 809,233 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0Y831,053 - 853,614 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblY833,206 - 853,537 (+)EnsemblRnor6.0rn6Rnor6.0
Cytogenetic MapYq11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References
Additional References at PubMed
PMID:24759410  


Genomics

Variants

.
Variants in Ube1y1
43 total Variants

Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
4 2 24 22 19 10 3 10 5 32 11 15 7 30 9

Sequence


Ensembl Acc Id: ENSRNOT00000080441
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 EnsemblY833,206 - 853,537 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000085338
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 EnsemblY781,974 - 802,296 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000093864   ⟹   ENSRNOP00000083120
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 EnsemblY788,868 - 809,233 (+)Ensembl
RefSeq Acc Id: XM_008773693   ⟹   XP_008771915
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8Y810,439 - 832,977 (+)NCBI
mRatBN7.2Y786,728 - 809,248 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001416311 (Get FASTA)   NCBI Sequence Viewer  
  XP_008771915 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000083120.1
GenBank Protein JAC06675 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_008771915   ⟸   XM_008773693
- Sequence:
Ensembl Acc Id: ENSRNOP00000083120   ⟸   ENSRNOT00000093864
Protein Domains
THIF-type NAD/FAD binding fold   Ubiquitin-activating enzyme E1 C-terminal   Ubiquitin-activating enzyme E1 FCCH   Ubiquitin-activating enzyme E1 four-helix bundle   Ubiquitin-activating enzyme SCCH

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-577 BioCyc
BioCyc Pathway PWY-7511 [protein ubiquitination] BioCyc
BioCyc Pathway Image PWY-7511 BioCyc
Ensembl Genes ENSRNOG00000052020 Ensembl
  ENSRNOG00000056639 Ensembl
  ENSRNOG00000070228 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000093864.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.10.2660 UniProtKB/TrEMBL
  2.40.30.180 UniProtKB/TrEMBL
  3.10.290.60 UniProtKB/TrEMBL
  3.50.50.80 UniProtKB/TrEMBL
  NAD(P)-binding Rossmann-like Domain UniProtKB/TrEMBL
  Ubiquitin-activating enzyme E1, inactive adenylation domain, subdomain 2 UniProtKB/TrEMBL
InterPro E1_4HB UniProtKB/TrEMBL
  E1_FCCH UniProtKB/TrEMBL
  E1_FCCH_sf UniProtKB/TrEMBL
  ThiF/MoeB/HesA UniProtKB/TrEMBL
  ThiF_NAD_FAD-bd UniProtKB/TrEMBL
  Ub-activating_enz_E1_C UniProtKB/TrEMBL
  Ub-E1_IAD_1 UniProtKB/TrEMBL
  UBA_E1_C_sf UniProtKB/TrEMBL
  UBA_E1_SCCH UniProtKB/TrEMBL
  Ubi_acti_E1_SCCH UniProtKB/TrEMBL
  Ubiquitin-activating_enz UniProtKB/TrEMBL
  UBQ-activ_enz_E1 UniProtKB/TrEMBL
  UBQ-activ_enz_E1_CS UniProtKB/TrEMBL
  UBQ-activ_enz_E1_Cys_AS UniProtKB/TrEMBL
  UBQ/SUMO-activ_enz_E1-like UniProtKB/TrEMBL
KEGG Report rno:103694557 UniProtKB/TrEMBL
NCBI Gene LOC103694557 ENTREZGENE
PANTHER PTHR10953 UniProtKB/TrEMBL
  UBIQUITIN-LIKE MODIFIER-ACTIVATING ENZYME 1 Y UniProtKB/TrEMBL
Pfam E1_4HB UniProtKB/TrEMBL
  E1_FCCH UniProtKB/TrEMBL
  E1_UFD UniProtKB/TrEMBL
  ThiF UniProtKB/TrEMBL
  UBA_e1_thiolCys UniProtKB/TrEMBL
PhenoGen Ube1y1 PhenoGen
PRINTS UBIQUITINACT UniProtKB/TrEMBL
PROSITE UBIQUITIN_ACTIVAT_1 UniProtKB/TrEMBL
  UBIQUITIN_ACTIVAT_2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000052020 RatGTEx
  ENSRNOG00000056639 RatGTEx
  ENSRNOG00000070228 RatGTEx
SMART UBA_e1_C UniProtKB/TrEMBL
Superfamily-SCOP SSF69572 UniProtKB/TrEMBL
UniProt A0A8I5ZVX0 ENTREZGENE, UniProtKB/TrEMBL
  A7LAC4_RAT UniProtKB/TrEMBL
  C9WPN5_RAT UniProtKB/TrEMBL
  W8CEN6_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-09-19 Ube1y1  ubiquitin-like modifier-activating enzyme 1 Y  LOC103694557  ubiquitin-like modifier-activating enzyme 1 Y  Symbol Changed 1299863 APPROVED
2021-03-09 LOC103694557  ubiquitin-like modifier-activating enzyme 1 Y  LOC103694556  ubiquitin-like modifier-activating enzyme 1 Y  Data merged from RGD:9331250 737654 PROVISIONAL
2014-08-25 LOC103694557  ubiquitin-like modifier-activating enzyme 1 Y      Symbol and Name status set to provisional 70820 PROVISIONAL
2014-08-25 LOC103694556  ubiquitin-like modifier-activating enzyme 1 Y      Symbol and Name status set to provisional 70820 PROVISIONAL