LOC102550684 (uncharacterized LOC102550684) - Rat Genome Database

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Gene: LOC102550684 (uncharacterized LOC102550684) Rattus norvegicus
Analyze
Symbol: LOC102550684
Name: uncharacterized LOC102550684
RGD ID: 7743776
Description:
Type: ncrna
RefSeq Status: MODEL
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr86145,485,830 - 145,498,535 (+)NCBIGRCr8
mRatBN7.26139,342,816 - 139,355,646 (+)NCBImRatBN7.2mRatBN7.2
Rnor_6.06146,286,183 - 146,298,535 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.06155,198,534 - 155,210,883 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera6136,994,650 - 137,007,002 (+)NCBICelera
Cytogenetic Map6q33NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in LOC102550684
25 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
12801411Schws8Schwannoma susceptibility QTL 8nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)694968928139968928Rat
61329Eae9Experimental allergic encephalomyelitis QTL 93.7body mass (VT:0001259)change in body weight (CMO:0002045)6122549046140994061Rat
737976Pia24Pristane induced arthritis QTL 24joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)6112636280140994061Rat
71111Iddm8Insulin dependent diabetes mellitus QTL 81.90.002blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)6105156861140994061Rat
1358355Srcrt4Stress Responsive Cort QTL 46.39blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)6100364669140994061Rat
2290393Uae37Urinary albumin excretion QTL 370.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)665531555140994061Rat
731173Uae22Urinary albumin excretion QTL 2210.1urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)665531555140994061Rat
8552796Vie3Viral induced encephalitis QTL 32.6brain integrity trait (VT:0010579)encephalitis incidence/prevalence measurement (CMO:0002361)696833997140994061Rat
2293085Iddm29Insulin dependent diabetes mellitus QTL 297.66blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)6122549046140286318Rat


Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XR_001838609
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86145,485,859 - 145,498,535 (+)NCBI
mRatBN7.26139,342,820 - 139,355,645 (+)NCBI
Rnor_6.06146,286,183 - 146,298,535 (+)NCBI
Sequence:
RefSeq Acc Id: XR_355201
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86145,485,830 - 145,498,535 (+)NCBI
mRatBN7.26139,342,816 - 139,355,646 (+)NCBI
Rnor_6.06146,286,183 - 146,298,535 (+)NCBI
Rnor_5.06155,198,534 - 155,210,883 (+)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-35466 BioCyc
NCBI Gene LOC102550684 ENTREZGENE
PhenoGen LOC102550684 PhenoGen
RNAcentral URS0000CCEF0F RNACentral
  URS0000CCF4A2 RNACentral


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-12-18 LOC102550684  uncharacterized LOC102550684      Symbol and Name status set to provisional 70820 PROVISIONAL