HNRNPA1P64 (heterogeneous nuclear ribonucleoprotein A1 pseudogene 64) - Rat Genome Database

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Gene: HNRNPA1P64 (heterogeneous nuclear ribonucleoprotein A1 pseudogene 64) Homo sapiens
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Symbol: HNRNPA1P64
Name: heterogeneous nuclear ribonucleoprotein A1 pseudogene 64
RGD ID: 7246410
HGNC Page HGNC:48794
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38180,450,948 - 80,452,075 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl180,451,083 - 80,452,004 (-)EnsemblGRCh38hg38GRCh38
GRCh37180,916,633 - 80,917,760 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36180,689,355 - 80,691,118 (-)NCBINCBI36Build 36hg18NCBI36
Celera179,155,921 - 79,200,945 (-)NCBICelera
Cytogenetic Map1p31.1NCBI
HuRef179,051,453 - 79,052,302 (-)NCBIHuRef
CHM1_1181,033,071 - 81,033,920 (-)NCBICHM1_1
T2T-CHM13v2.0180,288,527 - 80,289,654 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:228
Count of miRNA genes:204
Interacting mature miRNAs:208
Transcripts:ENST00000411674
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2316890GLUCO302_HGlucose level QTL 302 (human)0.005Glucose level16853299294532992Human
2289499BW445_HBody weight QTL 445 (human)2.26Body morphometrywaist to hip ratio16853299294532992Human
1581539BP75_HBlood pressure QTL 75 (human)2.40.001Blood pressurepulse pressure16853299294532992Human
2292793PRSTS24_HProstate tumor susceptibility QTL 24 (human)Prostate tumor susceptibilitylate onset16853299294532992Human


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
199 338 476 277 828 271 349 1 62 212 46 501 907 858 2 523 170 479 243 19

Sequence


Ensembl Acc Id: ENST00000411674
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl180,451,083 - 80,452,004 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC HNRNPA1P64 COSMIC
Ensembl Genes ENSG00000213559 Ensembl, ENTREZGENE
GTEx ENSG00000213559 GTEx
HGNC ID HGNC:48794 ENTREZGENE
Human Proteome Map HNRNPA1P64 Human Proteome Map
NCBI Gene HNRNPA1P64 ENTREZGENE