Gm14656 (predicted gene 14656) - Rat Genome Database

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Gene: Gm14656 (predicted gene 14656) Mus musculus
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Symbol: Gm14656
Name: predicted gene 14656
RGD ID: 5147051
MGI Page MGI
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Related Functional Gene: Crb1  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X61,251,724 - 61,252,228 (+)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX61,251,724 - 61,252,225 (+)EnsemblGRCm39 Ensembl
GRCm38X62,208,118 - 62,208,622 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX62,208,118 - 62,208,619 (+)EnsemblGRCm38mm10GRCm38
MGSCv37X59,461,293 - 59,461,797 (+)NCBIGRCm37MGSCv37mm9NCBIm37
CeleraX48,622,521 - 48,623,025 (+)NCBICelera
Cytogenetic MapXA6NCBI
cM MapX34.57NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Gm14656
2 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:97
Count of miRNA genes:96
Interacting mature miRNAs:97
Transcripts:ENSMUST00000120342
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4141630Gct6_mgranulosa cell tumorigenesis 6 (mouse)Not determined47179121129764756Mouse
13464140Hdlq108_mHDL QTL 108 (mouse)X5777196091771960Mouse
1301009Pbwg7_mpostnatal body weight growth 7 (mouse)Not determinedX3911371473113814Mouse
4141565Pbwg21_mpostnatal body weight growth 21 (mouse)Not determinedX3911371473113814Mouse
25314311Syncl3_msynaptonemal complex length 3 (mouse)X5198887789743606Mouse
13824980Ferq1_mgenetic fertility QTL 1 (mouse)X54045360148782996Mouse
4142200Rtwq1_mreduced testis weight QTL 1 (mouse)Not determined4147706075477203Mouse
1300794Spha2_msperm head anomaly 2 (mouse)Not determinedX3992149886260137Mouse
1357433Dbts2_mdiabetes 2 (mouse)Not determinedX7226295150107038Mouse
1301278Bdln1_mbody length 1 (mouse)Not determinedX4170210675702218Mouse
1300702Fcsa4_mfemoral cross-sectional area 4 (mouse)Not determinedX4602744480027567Mouse
4142286Pubt1_mpubertal timing 1 (mouse)Not determined5241220061880496Mouse
10412108Desp5_mdespair 5 (mouse)Not determinedX5472235188722351Mouse
1301351Obq6_mobesity QTL 6 (mouse)Not determinedX5077237570434751Mouse
12880401Emlq3_memotional learning QTL 3 (mouse)X5799218370090431Mouse
4141126Lvic5_mliver iron content 5 (mouse)Not determined5241220063027567Mouse
13208567Bmiq12_mbody mass index QTL 12 (mouse)X3526365377043606Mouse


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NG_018063 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AL669895 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000120342
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX61,251,724 - 61,252,225 (+)Ensembl
GRCm38.p6 EnsemblX62,208,118 - 62,208,619 (+)Ensembl

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000082168 Ensembl, ENTREZGENE
MGD MGI:3705637 ENTREZGENE
NCBI Gene 100417188 ENTREZGENE
PhenoGen Gm14656 PhenoGen